Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                 ----                                                                                              ------>ZmHOX2a(1)                                                                                             <-------                                                                                           ------>ZmHOX2a(1)                               <---------ARR14(2)                                         <---------ALFIN1                               <---------GLK1(2)  ------>NtERF2                         ------>ZmHOX2a(1)                            --------->YAB1        --------->LBD16                      <---------ALFIN1                         --------->ARR14(2)     <---------LBD16                        <xxxxxxxxxxxxx                         <---------ARR14(2)   --------->ARR14(2)                     ------>ZmHOX2a(1)                        <------ZmHOX2a(1)     <---------ARR14(2)                    <---------ALFIN1-                    <------ZmHOX2a(2)    --------->ABI4(2)                          <xxxxxxxxxxxxxxxxsmallRNA(se3)                   --------->ARR14(2)   --------->ALFIN1                          ------>ZmHOX2a(1)--                   <---------ARR14(2) --------->LBD16           <----------DOF2  <---------ALFIN1<---                  <------ZmHOX2a(1) <---------LBD16          --------->ANAC58    <xxxxxxxxxxxxxxxxsmallRNA(se3)        --------->At4g35610<-------TEIL<---------MYB52(1)    --------->ANAC58  ------>ZmHOX2a(1)<---- <---------YAB1--------->YAB1  --------->ARR14(2)--------->ANAC46    <------------------------ANAC81-   acgatgaatgaactgaatgaggatcaggattcatattctccggtgctgtttccgccaatagccaagctttgttattctctcctcctcctcctcctcctcc  15028000       <---------MYB52(1)      ------>NtERF2     --------->DEAR3(1)    --------->ATERF1(1)    <------NtERF2    --------->DEAR4(2)    --------->RAP2.3(1)   --------->ABI4(1)   <---------RAP2.3(1)   <---------ATERF1(1)   ------>NtERF2  <---------DEAR3(1)  --------->RAP2.6(2)  --------->DEAR3(1)  --------->ANAC46  <---------ATERF1(2)  --------->ATERF1(2)  --------->RAP2.3(2)  --------->RRTF1(3)  --------->RRTF1(2)  --------->RAP2.3(3)  <---------ALFIN1 --------->RAP2.3(1) --------->ERF1 --------->DEAR4(2) --------->RRTF1(1) --------->ATERF1(1) --------->RAP2.6(1) --------->ORA47(2) ---------ATERF1(1) ----->NtERF2 -------->ABI4(1) ---------At4g35610                                                                            <----- --------ALFIN1                                                                            --------->KAN4(2) ------->ANAC46                                                                          ============ -->ZmHOX2a(1)                    <------NtERF2                                          <---------YAB1 --ALFIN1                      <---------LBD16                ----------->GT1            <------ZmHOX2a(2) xxxsmallRNA(se3)         <---------MYB46(3)               =====================================HOX2a_HOX2a -------->At4g35610       <-----------RAV1(1)       ---------->DOF2                 ---------->DOF2 ------->DEAR3(1)         <---------REM1(1)       <----------DOF2    --------->ANAC58   <---------ARR11(3) ------ATERF1(1)       <-----------RAV1(1)      <---------At4g35610  --------->ANAC58   --------->ARR11(3) -----ALFIN1      ------>ZmHOX2a(1)        <-------GAMYB   <------ZmHOX2a(1)      <---------ATHB12 -------->LBD16------>ZmHOX2a(1) --------->LBD16--------->At4g35610 --------->TOE1(2)  --------->YAB1   tccgccgccgcttgttcctcctccattgttgttgccggagttttcggttgagcttaaaggaggaaggaaacaagcgaaacccaaatcaaagatcattctt  15028100                                                           <---------YAB1                                                           --------->ICU4                                                       ------>ZmHOX2a(2)                                                      --------->CCA1(2)                                                      <------ZmHOX2a(2)                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                     --------->AGP1                          <-------                                                     <---------ARR11(3)                     <--------                                                     <---------AGP1                      --------->KAN4(2)                                                     <---------ARR14(3)                 --------->KAN4(1)                                                     --------->ARR14(3)                 <---------KAN4(1)                                                     --------->ARR11(3)                <---------KAN4(2)                                                <---------MYB52(1)               <---------ARR14(2)                      <-----------RAV1(1)     --------->ANAC46                   --------->GLK1(2)<-- ---------->DOF2 ------>ZmHOX2a(1)  --------->ICU4 ----------->ARR10             --------->MYB52(1) -----DOF2<---------YAB1         <---------YAB1<-----------HVH21      >>>>>>>>>TBF1    ---------->TaMYB80 =======================HOX2a_HOX2a--------------------->WRI1      >>>>>>>>>TBF1 --------->ARR14(2)   ttcaaaagggttttgattcctgtattgttgttgttgtcattgttatctccgtcaagatctgatgatgaagaagaagaagtgagtatcggaatattcactg  15028200                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                      ----------->GT1                                                                                  --------->HSFB2a(2)                                                                                  <---------HSFB2a(2)                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)  <---               <---------ARR11(3)                                             --------->GLK1(1) -----               --------->ARR11(3)                                            --------->AGP1     -----          --------->HSFB2a(2)                                                <---------ARR14(2)<-----          <---------HSFB2a(2)                                                --------->ARR14(2)------ --At5g28300  <---------GLK1(1)                                              --------->ARR11(3)<----- ---GT1  <---------LBD16               --------->YAB1                        <---------AGP1---------- ----------------------ANAC81        ------>ZmHOX2a(1)<----------DOF2        <---------ARR11(3)------   tgtttttgttttctggagttcttggatgaacagaggctccttcataaaaacccattctttatctctctctctatgaacagatctcgagaagcaaaaagat  15028300  --------->DAG2 ---------->DOF2                                              <<<<<<<<<<GT-3b ----TEIL                                                 --------->AHL20(2) ---->CCA1(2)                 <----------DOF2          ------->TEIL               *TSS ---->ARR14(1)                <---------WOX13(1)    <---------ANAC55(2)        --------->ATHB51 ----GLK1(2)                 <---------AtLEC2       --------->ANAC55(2)        --------->ATHB12 --->ARR14(2)                <---------ANAC58    --------->GLK1(2)            <---------AHL20(2) >>>> ----ARR14(2)            <----------DOF2         --------->ARR14(2)     ----------->GT1    >>>>>>>>>TBF1 >DOF2              ---------->DOF2       ---------->DOF2 <---------AHL20(2)  <---------YAB1  >>>>>>> --->ARR11(1)<----------DOF2 <---------ANAC58    <---------ARR14(2)   ---------->DOF2   >>>>>>>>>TBF1   tcgaaaagtttgattctttttgaaaagctttgcttgatggaagagaaagagaatatgtatttatttttcttataaagtttataattggaagaagaagaag  15028400                 <---------TOE2(3)               <---------AHL20(2)              --------->AHL20(2)              <---------AHL20(2)           --------->AHL20(2)                                                                     ---           <---------AHL20(2)                                                               ---------           --------->AHL20(1)        <------MYB83                                           <--------      <---------AHL20(2)             ----------->GT1                                  <------MYB46(1)      --------->AHL20(2)             <------MYB46(1)                                  <------MYB83---     --------->AHL20(2)             <---------AtMYB61                                <---------AtMYB61   <---------ARR11(3)    <---------YAB1 ----------->GT1    <---------AHL20(2)     <---------MYB46(3)   --------->ARR11(3)  --------->ATHB12--------->ALFIN1   <---------AHL20(2)      --------->MYB111(2) >>>>>TBF1<---------AHL20(2)  <---------MYB46(3)          --------->AHL20(2)<---------MYB52(1)------>ZmHOX2a(2) >>TBF1   --------->AHL20(2) <---------AtMYB61--------->TOE2(3)            <-------GAMYB<---------ANAC46   aagaagatttaattaaattaatgtgtgattagtggtggaaggtggaaacattagttttattttaatttttcttataccgttaagttgttggtgtgatctt  15028500                                              --------->ICU4                                              <---------ATHB12                                              <---------YAB1                                             <---------TOE2(3)                                           --------->AHL20(2)                                           <---------AHL20(2)                                   <----                                          <---------YAB1                              <--------ATHB1                                       <---------YAB1                                 <---------ICU4                                       --------->ICU4                                <---------ATHB51                                   <------MYB46(1)                                   <---------AHL20(2)                                   ----------->GT1                                   --------->ICU4  --------->ANAC58                 <---------ANAC55(2)                               --------->AHL20(2)  ----------->GT1                  <------MYB83                                  --------->AHL20(2)  --------->ANAC58                <---------TOE2(3)    <----------DOF2--------->ATHB12--------->ATHB51 ------>ANAC58                    --------->MYB59    ---------->ID1   -------->ATHB1<---------AHL20(1) >ARR11(3)                   --------->AHL20(1)     <-----------GT1   --------->ATHB51-------->HAHB4 -ARR11(3)                   <---------AHL20(2)<---------ICU4        <---------ATHB51<---------YAB1 ------>ANAC58               --------->AHL20(2)--------->ATHB12      --------->ICU4--------->YAB1   aagcaagaaaaaacaagagaagaagggggaattaattaggtataattaatgatttttctttttggttttgaattattgagttttaaaataattgtgagcg  15028600                                       <---------AHL20(2)                                 --------->ZAT18                                 <---------ICU4                                   <---------------AGL15                                 --------->ATHB12                                 --------------->AGL15                                <---------ATHB12                          <---------At4g35610        ------>MYB83            <---------YAB1                         <---------MYB52(1) <----------ID1        ------>MYB46(1)         --------->ICU4                 ---------->DOF2 <---------YAB1  ------       --------->WOX13(1)  --------->ANAC55(2)      <-----------HVH21 <-------GAMYB  ---------->DOF2 ---GAMYB<---------ATHB12  <---------ANAC55(2)    --------->MYB59    <---------MYB46(3)--------->DAG2   ttacaaaaccaatcaaacaagtgtttattatgtaatgattttaaaatgtttttaggtcatatgggtaaaggctgttagcttatacttaaaaggggacaaa  15028700                                                                                           <---------                                                                                           ----------                                                                                          <---------YAB1                                                                                          ===========                                                                            <---------YAB1-----------                                                                            <---------AHL20(2)        --------->O2                                                       <---------AHL20(1)        <---------O2                                                       --------->AHL20(1)     --------->ZAT18                                         <---------YAB1--------->AHL20(2)     --------->DEAR3(1)       --------->MYB52(1)           <-----------GT1--------->YAB1  <----------   --------->PCF2            --------->ICU4 --------->AHL20(2)        <---------AHL20(2)  <----------   <---------ZAT18 <----------DOF2    ----------->GT1   <---------ZAT6--------->AHL20(2)<-----------GT1 ---->DOF2   --------->ALFIN1<---------ATHB51<---------AHL20(2)  --------->YAB1      <---------ZAT6   agcagagcccacgaggttgtgcttctctgaaataatggagaagttataaaattcacaagtgttactatcgaaataaatataattcaagtgttactatttt  15028800                                                                                  --------->AHL20(2)                                                                        --------->ANAC58   <---------YAB1                                                       --------->ANAC58          <XX ------AGL15                                                            --------->ANAC46       <----- ----->AGL15                     --------->ALFIN1            --------->ARR11(3)   <---------AHL20(2) ================================================================MADS_MADS<---------ZAT18 <---------ICU4 ------>AGL3                    ------->MYC3     <<<<<<<<<<<<<<<<<LFY <-----------RAV1(2)--------->ICU4 -------AGL3                    <-------MYC3   <-----------------AG <-----------HVH21    <---------YAB1 -------AGL2        <---------YAB1            <-----------GT1<---------ARR11(3)  --------->AHL20(2)   tagtttttattctctgtgttttctgattcgtacatgtggcgaaatatttgacaacattggtaagaacttgggtcaggccactatttatttcatgattatg  15028900  Previous    Next  AGI:  At5g37790.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G66460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17118.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 15025402    to: 15028382    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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