Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ----------->RAV1(1)            --------->AtMYB61            <---------ALFIN1           --------->MYB46(3)         --------->AtMYB61         <---------ALFIN1         --------->DEAR3(1)        --------->MYB46(3)     --------->MYB46(3)    --------->ANAC58                                     ------->GAMYB               <---------ICU4    --------->ANAC58                                     --------->AtMYB61           --------->YAB1  ---------->DOF2                                        --------->YAB1             <---------ATHB12 ------>ZmHOX2a(1)                                 --------->ANAC46               --------->YAB1 -------->TOE2(3)     --------->YAB1               --------->ZAT6           <----------DOF2 ----->ARR14(2)<---------ICU4                    <-----------GT1      <---------ARR11(3) ------ARR14(2)--------->AtMYB61          --------->YAB1--------->MYB46(3)  <---------DAG2   <-------   atcctcaagcaccaccaccattactcatcatcttcttaaactcatcaaaattaacacaaccatcaccatcaatatcaactttactaatcatcttcttaca  15016400                                                              ------>ZmHOX2a(1)                                                            --------->HSFC1(2)                                                            <---------HSFB2a(1)                                                            ------>ZmHOX2a(2)                                                            <---------HSFC1(2)                                                            --------->HSFB2a(1)                                                           <------ZmHOX2a(2)                                                          --------->ARR14(2)                                                          --------->ARR11(3)                                                          <---------ARR11(3)                                                          <---------ARR14(2)                                                          --------->AGP1                                                         <---------GLK1(1)                                                         --------->GLK1(1)                   --------->ANAC58                     ----------->ARR10                   --------->ANAC58                   --------->DEAR3(1)        --------->YAB1                   --------->ANAC46             <----------DOF2                <---------ATHB12         <---------ZAT18                     <---------ARR11(3)          ------>MYB46(1)         --------->ZAT14                     --------->ARR11(3)          ------>MYB83 ----GT1 <---------ZAT14<---------GLK1(2)  ------->TEIL------>NtERF2     --------->AtLEC2          <-   atcttgcacagagcacttctcacccaaattcttcatcactgaatgaagctctttcgccgagatccttccattaccatccaaatcatataactcaaacgct  15016500                                                                                          <---------MYB52(1)                                                                                          --------->DOF5.7(2)                                                                                     <---------ARR14(2)                                                                                     ------->TEIL                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                --------->ARR14(2)           <---------ARR14(2)                                                <---------ARR14(2)           --------->AGP1 <--------                                             ----------------->AGL1          --------->ARR11(3)                                            <-----------------AG             --------->ARR14(2)                                            <-----------------AGL1           <---------ARR11(3)                                           --------->ARR14(2)                <---------AGP1 <--------                         <---------MYB46(3)--------->GLK1(2)                <---------CCA1(2)                     <---------YAB1   ------>ZmHOX2a(1)            --------->ARR14(2)--------->ARR14(2)            --------->SPL7        <---------ALFIN1      --------->DAG2    <---------HSFB2a(2)     ---           <---------TGA2(2)<-----------GT1<---------ARR14(2)      <---------ARR14(2)------------>MYB.PH3(1) ---------DOF2   <---------DEAR3(2)------>ZmHOX2a(1)   ---------->DOF2    --------->HSFB2a(2)     <--   tctttcaaatcgcttacgtcgtttcgattgttacctcctcctccgattccgatttggaaaagcgcgacgaattcgtccagatctatgaatccgttaccgt  15016600                                                                                            <--------                                                                                         <---------ARR11(3)                                                                                         <---------GLK1(2)                                                                                         --------->ARR11(3)                                                                                         <---------ARR14(2)                                                        --------->ZAT18                  --------->ARR14(2)                                               <------MYB46(1)                     <---------LBD16  -                                               <---------MYB46(3)                <---------DEAR3(1)--                                               <------MYB83                      ----------->HVH21---                <---------ICU4                <---------AtMYB61                  --------->DEAR3(1)<- -DOF5.7(2)    <---------YAB1                 <---------MYB46(3)      <----------DOF2  ----------->ARR10 -At5g28300  --------->YAB1                  <---------MYB52(1)       --------------------->WRI1 <--- ------>HSFB2a(2)    <---------MYB52(1)     <-------GAMYB <---------LBD16  <---------At4g35610  ----- -------HSFB2a(2)  <---------ICU4          <-----------RAV1(1) <------ZmHOX2a(2) --------->ETT(2)<---   ctagatcgaattgtttcatcatcgttactgtttcttctggtgatgctgttggtgagagagcgcggatcacttctttgagctcgtcgacggagattttccc  15016700    <---------MYB52(1) <------NtERF2 ---GT1 ----->NtERF2 ------->DEAR3(1)                                  ------>ZmHOX2a(1) ------>ATERF1(1)                                 --------->TOE2(3) --------DEAR3(1)                     <---------ANAC58           --------->MYB46(3) ------ATERF1(1)                      <---------ANAC46   --------->ZAT2 ---->ANAC46               <----------DOF2       ------>ZmHOX2a(2)       <---------MYB52(1)    ------ --------HVH21  --------->ATHB12      <---------ANAC58   --------->At4g35610     ----------->HVH21   gtcgccgtttttgtcgaatcgttggaagacttttttgatgtcgtccattgatcctaaacagctacgaacaactccgttcttcgatgacattgttgaagaa  15016800                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                             --------->ALFIN1                                    <---                                             <---------ANAC58                --------->MYB52(1)  <---                                             <---------ANAC58           <---------YAB1           ----            --------->CCA1(2)              <---------ANAC58        <------MYB46(1)               ----         <---------TOE2(3)                 <---------ANAC46        <------MYB83                  ----    --------->GLK1(2)                      <---------ANAC58        ----------->GT1              -----   <---------ARR11(3)                  <---------ZAT14         <---------ARR14(2)              <-----   --------->ARR11(3)        ------------>MYB.PH3(1)           --------->ARR14(2)             ------- <---------TOE2(3)           --------->MYB52(1)  *TSS         <------ZmHOX2a(1)   ---------->DOF2<--- --->ARR11(3)        ----------->GT1   --------->ZAT14  >>>>>>>>>TBF1   ----------->TBP       -------   attgagattttgagatttgagagaagaaaaaaaacggttagagtagtgtgtgtgtgaagaagaaggatttggttataaataagggaaagagagagggtga  15016900   <-----------GT1 ------ANAC55(2) ------ANAC58 ------->GT1                                <---------MYB46(3) ----->ANAC55(2)                            --------->ALFIN1 ------ANAC46                             --------->ZAT2 ----->ANAC58                             <---------ZAT2                               <---------ARR11(3) ------bZIP60(1)                          --------->At4g35610              <-----------GT1 ------TGA2(1)                       <---------ANAC55(1)                   <---------AHL20(2) ----->TGA2(1)                 <---------TOE2(3)                       <---------AHL20(2) ----->bZIP60(1)    ---------->DOF2  <---------ANAC46                  --------->AHL20(2)        <--- ----->ANAC58       <---------AHL20(2)    <---------At4g35610         --------->AHL20(1)      <------ ------>STF1       --------->YAB1    <---------ANAC58  <---------YAB1 <---------AHL20(1)  --------->AHL20(2) ----TGA2(2)       <---------AHL20(2)<---------ANAC58 <----------DOF2 --------->AHL20(2)  <---------AHL20(2) ---->HVH21        --------->AHL20(2)--------->ANAC55(2)   --------->AHL20(2)          --------->ARR11(3) ------ANAC58  --------->AHL20(2)    <---------ANAC55(2)   <---------AHL20(2) <----------DOF2 <------ ---->TGA1     <---------AHL20(2)<------------CBF<------NtERF2        <---------AHL20(2) --------->AHL20(2)   cgtaataacgcgtttttttaattaaaacgcgttgagattgcgtgagctggtggcatctttattaattctaaatttatttactttccaaagatttatttac  15017000                                           <----------ID1                                         ---------->DOF2                                       --------->AHL20(2)                                   <--------                                       <---------AHL20(2)                                   ---------                                       --------->YAB1                                      <---------                                   <---------ATHB51                 <----------ID1   <---------AHL20(2)                                --------------->AGL15             --------->CCA1(2)  <---------AHL20(1)                                =====================================================================       <---------AHL20(2)       <---------------AGL15         <---------TOE2(3)      --------->AHL20(1) --------->ANAC55(2)         <-----------GT1          <----------DOF2                --------->AHL20(2) -------DOF2         ----------->GT1--------->YAB1 <---------ARR11(3)             --------->YAB1 -----GT1 <---------YAB1 <---------AHL20(2)----------->GT1   ---------->DOF2     <---------YAB1 ---AHL20(2)    --------->HSFB2a(2)<---------ATHB12--------->ARR11(3)<------ZmHOX2a(1)     <---------   tttacatattttatgcttccaaaatgtttatttaccaataataaaaagaaaaatgtctttgattaaagataggacaagttgctataataaatttctgtat  15017100                       --------->AHL20(1)                       <---------AHL20(1)                      <---------AHL20(2)                    <---------AHL20(2)                    --------->AHL20(2)                  <---------AHL20(2)            <---------AHL20(2)            --------->AHL20(2)          <---------AHL20(2)          --------->AHL20(2)        <---------AHL20(2)                                      <---------AHL20(2)        --------->AHL20(2)  <---------AHL20(2)                 <---------AHL20(2)      <---------AHL20(2)  <---------AHL20(2)               --------->AHL20(2)      --------->AHL20(2)<---------AHL20(2)               --------->ANAC58 -------AGL15   --------->AHL20(2)                       --------->ANAC46 ------>AGL15   <---------AHL20(2)                       --------->ANAC58 --------AGL3 <---------AHL20(2)                  --------->AHL20(2)  --------->ZAT6              --- =======MADS_MADS --------->AHL20(2)           --------->YAB1  --------->AHL20(2)                 <-- --------AGL2 --------->AHL20(2)        <----------DOF2  --------->ANAC55(2)            <---------MYB46(3)   atagctatatatatatatatatatatatattttttgggtaaactttcattcataaattcaagtaattttataagactaagtggataacattggtttctaa  15017200                                                                  <---------ANAC58                                                                  <---------ANAC58                                                             <---------ICU4                                                             --------->ATHB51                                                             --------->ATHB12                                                            <---------AHL20(2)            --------->YAB1          ----------->GT1         --------->AHL20(2)              ---------           <---------YAB1         ---------->DOF2        <---------AHL20(2)                 <--------           --------->ICU4--------->AHL20(1)              --------->AHL20(2)                --------->ICU4         --------->YAB1  --------->AHL20(2)         <---------ARR11(3)                <---------ICU4         <---------ICU4  <---------AHL20(2)         --------->ARR11(3)                --------->YAB1        <---------ATHB51--------->AHL20(2) <---------AHL20(2)-------->ATHB1         --------->ARR11(3)        --------->ICU4  <---------AHL20(2)<---------AHL20(2)--------->ICU4         --------->YAB1 ------>AHL20(2)    --------->AHL20(2)    --------->AHL20(2)<---------ATHB51    --------->YAB1  ----- -------AHL20(2)    <---------AHL20(2)--------->AHL20(2)--------->AHL20(2)<----------DOF2  <---------YAB1   tttataagaaattatgatgagtttaattaaattatagaaagtaaataaatgaaagattttaaattattgctagagactttttttataatcttgatgatta  15017300  Previous    Next  AGI:  At5g37770.1    Description:  TCH2 (TOUCH 2); calcium ion binding. Identical to Calmodulin-related protein 2, touch-induced (TCH2) [Arabidopsis Thaliana] (GB:P25070;GB:O22592); similar to calmodulin-related protein, putative [Arabidopsis thaliana] (TAIR:AT1G66400.1); similar to unknown [Populus trichocarpa] (GB:ABK95094.1); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 15016084    to: 15016849    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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