Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------KAN4(2)                       --------->AtMYB61 ->ZmHOX2a(2)                              ------->GAMYB -ZmHOX2a(2)                              --------->MYB46(3) --->CCA1(2)                             --------->ANAC58 -->AGP1                                 --------->ANAC58 ---AGP1                      <------ZmHOX2a(1) -->ARR11(3)                 <---------ZAT18 ---ARR11(3)             --------->HSFB2a(2)           --------->ANAC46 -->ARR14(2)             <---------HSFB2a(2)--------->MYB52(1)                           ----------->GT1 ---ARR14(2)    ------>MYB46(1)        --------->MYB46(3)                               --------->DAG2 -->ARR10       ------>MYB83 --------->ZAT18---------->DOF2  --------->AtMYB61         ---------->DOF2   tgaagaataaacaaaaccaaattggctctagaggactaagaacaaccaaaggcagacacaaaaccaaaactataatccatacaatcccaaaaagtaaaac  14952700                      --------->ANAC46        --------->CCA1(2)        --------->MYB52(1)    --------                      --------->ANAC58<---------TOE2(3)     --------->ANAC46            <----------ID1         ----------->GT1 ------->TEIL --------->MYB59    <---------ARR14(2)         ---------->DOF2    ---------->DOF2   --------->ANAC58<---------TOE1(3)  --------->ARR14(2)       <---------YAB1   agagtcaaaagttgaaaaaacaacacgaacccattagatttaggtttgatacgagaacatatacacaaacaaaaaacgatttttatgaaagaaacaaaag  14952800                                                                  --------->At4g35610                                                                  --------->CCA1(2)                                                                  <------ZmHOX2a(2)                                                                 <---------AGP1                                      <---------ZAT18            --------->AGP1                                      --------->ZAT14            --------->ARR11(3)                                      <---------ZAT14            <---------ARR14(2)                                    <---------At4g35610          <---------ARR11(3)                                    --------->At4g35610          --------->ARR14(2)                                <-----------HVH21               <---------GLK1(1)                           --------->ARR11(3)                  ----------->ARR10                          <--------ATHB1                  <-------TEIL       ------->TEIL       --------->YAB1              <---------TOE2(3) <----------ID1          --------->ICU4 <---------ANAC46 <--------P------>ZmHOX2a(2) -->DOF2                 <---------ATHB12             <---------TOE1(3)   aagaagacgaaccatatgtattcagcaatgattttgtcagtggagtctgagaggttaaggttgatgagatctgaaacaagactcatggctacaaatacca  14952900                        <---------AHL20(2)   <---------ANAC46                       --------->AHL20(2)    <---------ANAC58                                       <                       --------->YAB1    <-----------HVH21                                        ---                     <-----------------AGL3  <---------ANAC58                           -------------                    --------->YAB1   --------->GLK1(2)                   --------->CCA1(2)       <---                 ----------->GT1     <---------ARR14(2)                 <---------ARR11(3) <---------HSFB2a(2)                --------->ZAT6       --------->ARR14(2)                 --------->ARR11(3) --------->HSFB2a(2)       <---------YAB1================================================================================   agggtttggatgatagtaacagtaataaaaatggaatcaaatctgtctcgtgttttgatattttggtagagagagatatgaagagtagtacttatagaag  14953000           --------->ZAT18           <-------TEIL           <---------At4g35610           --------->ZAT14           <---------ZAT14           --------->At4g35610          --------->ALFIN1        <---------ANAC46             --------->REM1(2)        <------MYB46(1)           <---------O2        <---------ANAC58          --------->O2        <---------ANAC58          --------->TGA1a        <------MYB83              <---------TGA1a       <---------MYB46(3)         ====================bZIP_DOF       --------->MYB111(2)        <---------ANAC58       --------->MYB55(2)         <---------ANAC46       <---------DEAR3(1)         --------->bZIP60(1)       --------->MYB111(1)        --------->ANAC55(2)      ======================================MYC_MYB      <--------P                  <---------ANAC55(1)      --------->ALFIN1            <---------ANAC55(2)      <---------MYB55(1)          =============================bZIP_DOF    <---------ANAC58              <---------bZIP60(2)    <---------ANAC46              <---------bZIP60(1)    --------->ALFIN1              <---------ANAC58    <---------ANAC58              ================================================bZIP_DOF   --------->ALFIN1              ----------->STF1                        --------->ANAC58 --------->ALFIN1                <-----------------------TaNAC69(2)      ----------->GT1 ------ZmHOX2a(1)               <---------TGA2(2)                        --------->ANAC58 ------>ALFIN1                 ----------->TGA1                        ---------->DOF2 -->AGL15<---------PCF2        ----------->HVH21    <----------DOF2    *TSS<----------ID1 ---ZmHOX2a(1)         <------ZmHOX2a(1)            <---------DAG2  --------->ANAC58              <-- ===MADS_MADS        <---------TOE2(3)     <----------DOF2          --------->ANAC58       --------->AHL20(2)   gaggaggggtgggtgcagagattgaggaagagggtgacgtgaagactttggagactttttggctctccacaaggaaagaaacaaaaaatacaactaaata  14953100                                --------->MYB52(1)                     <----------DOF2                 --------->ARR11(3)                 <---------GLK1(2)          --------->YAB1      ------------>CBF          --------->AHL20(2)------>NtERF2      --------->AHL20(2)    <------NtERF2      <---------AHL20(2)   --------->DEAR3(1)                 <---------TOE2(3)     <-----------RAV1(2)     --------->AHL20(2)   <---------RAP2.6(2)                ---------->DOF2     --------->ANAC46     <---------AHL20(2)  <---------LBD16                   <---------YAB1        --------->ANAC58 <------ZmHOX2a(1)--------->GLK1(2)                <---------LBD16               --------->ANAC58 -------LBD16    <---------ARR11(3)  <---------GLK1(2)<------ZmHOX2a(1)<-----------TBP----------->GT1   tcaggaataaaattataaagattctttcgcggcccaatggaatctcatatttttcaggaatattaaagtttacatatatagacacaccaggttacaattt  14953200                                                                                            <--------                                                    --------->RVE1(1)                       <--------                                            ----------->GT1                                 ---------                                           <---------TOE2(3)                               --------->TOE2(3)                                     --------->ATHB51                                    <---------AHL20(1)                                     --------->AHL20(2)                     <---------AHL20(2)                                     <---------ICU4--------->ARR11(3)      <---------AHL20(1)  <-----                                     <---------AHL20(2) <----------DOF2    --------->AHL20(1) <------                  ---------->DOF2   <---------YAB1 --------->GLK1(2)       --------->AHL20(2) -------       --------->ATHB12             --------->ICU4 <---------ARR11(3)      <---------AHL20(2) -------    --------->bZIP60(1)        ----------->GT1    --------->RVE1(1)     --------->YAB1   --------->AHL20(1)    <---------bZIP60(1) ---------->DOF2    <---------TOE1(3)       ----------->GT1----------->GT1   -   tgtatgaggtcattggaataaaaagagaaagaaatgtaattatttaaggtaaaaatctctttctgtaaatgctaaaataaaatttgggaaaaatattaat  14953300                                                 <---------WOX13(1)                                              <---------YAB1                                              <---------AHL20(2)                                             <---------AHL20(2)                                             --------->AHL20(2)                                            --------->YAB1                                         <---------AHL20(2)                                        <---------AHL20(2)                                        --------->AHL20(2)                                       <---------YAB1                                   --------->AHL20(2)     <-----------GT1                 <---------ICU4                                <---------AHL20(2)     --------->ZAT6                  -------->ATHB1                            <---------AHL20(2) -YAB1                              --------->ICU4                            --------->ARR11(3) -AHL20(2)                          --------->AHL20(2)                        <---------ARR11(3) >AHL20(2)                          <---------AHL20(2)                        <---------AHL20(2) ----YAB1                           <---------ATHB51                          --------->AHL20(1) ---AHL20(2)                     --------->AHL20(2)                           --------->AHL20(2) -->YAB1                         <---------AHL20(2)                     <-----------GT1 <---------AHL20(2) -->AHL20(2)                    <---------AHL20(2)                <---------YAB1 <---------AHL20(2) -------->TOE2(3)               --------->AHL20(2)         --------->YAB1     <---------AHL20(1)-----   attcttaatactacattttctgtgttattgatttttaaattattaattttaattgatacaaacataatatgatataacaatatatttttttttaatatgt  14953400                                                         --------->AHL20(2)        --------->TOE1(3)                                <---------AHL20(1)                    <-----        --------->TOE2(3)                        <---------AHL20(1)                           -------      --------->GLK1(2)                     <---------WOX13(1)                                <------      --------->ARR11(3)                  --------->ATHB51                              --------->YAB1      <---------ARR11(3)                 <---------YAB1  <---------AHL20(2)           ----------->GT1     --------->RVE1(1)                 --------->YAB1 <---------AHL20(2)<---------ARR11(3)   --------     --------->CCA1(1)               ----------->GT1<---------AHL20(2)  --------->ARR11(3)  <--------   --------->AHL20(2)           <----------ID1   --------->AHL20(1)     <---------AHL20(1) --------->YAB1 ------>GT1                  --------->MYB52(1)  --------->AHL20(2)     --------->AHL20(1)<---------YAB1   gtaaaaaaaatcttaaatgatatataaaacaaaacggacaagtataattgatatattattttatttgtgcaaaatatatcaatagatttagtataataat  14953500                         <--------HAHB4                         --------->ATHB51                        <---------YAB1                        --------->ICU4                      --------->TOE2(3)                --------->ALFIN1              <---------ANAC46              <------MYB83              <------MYB46(1)                                                                     ---             --------->MYB59  <-----------GT1                                                     ---      ----------->GT1 --------->YAB1     <---------ICU4                                           --- ----TOE2(3) --------->MYB46(2)          --------->YAB1                                   <---------YAB1 -->YAB1 --------->ATHB12<---------ICU4 <---------ATHB12                                 <---------AHL20(2) ---ICU4 <---------MYB46(3) <---------AHL20(2)                                           <---------AHL20(1) ->ICU4--------->At5g28300  --------->AHL20(2)     --------->ICU4                      <---------YAB1 -AHL20(2)   --------->MYB111(1)      --------->YAB1                               <---------GLK1(2)   gttttaaacggtgattaggtggaaccataattaaacactctaatcatcttgaaattagtatttgttttctaatgcaacttacttagattattatttttaa  14953600  Previous    Next  AGI:  At5g37600.1    Description:  ATGSR1 (Arabidopsis thaliana glutamine synthase clone R1); glutamate-ammonia ligase. Identical to Glutamine synthetase cytosolic isozyme 1-1 (GLN1-1) [Arabidopsis Thaliana] (GB:Q56WN1;GB:Q9FHR0); similar to ATGSR2 (Arabidopsis thaliana glutamine synthase clone R2), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT1G66200.1); similar to GLN1,4 (Glutamine synthetase 1,4), glutamate-ammonia ligase [Arabidopsis thaliana] (TAIR:AT5G16570.1); similar to glutamate--ammonia ligase [Brassica napus] (GB:CAA58118.1); similar to cytosolic glutamine synthetase [Brassica napus] (GB:CAA73063.1); similar to glutamine synthetase [Raphanus sativus] (GB Range:  from: 14950566    to: 14953071    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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