Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      ------>MYB46(1)                                                    ------>MYB83               ----------->GT1                                                  <---------MYB59             --------->DAG2                              <----------DOF2   ------->TEIL                  <---------TOE2(3)                              ------>ZmHOX2a(1)<---------ARR11(3)           ---------->DOF2                <-----------GT1       <---------TOE2(3)<----------DOF2 --------->At4g35610            --------->YAB1 ---------->ID1--------->GLK1(2)         --------->GLK1(2)    ----------->GT1   acattcttactcaaatataaacaatttttgtccttttgttaagaatcaagaacctatcttttacatgagaatcatctaaaaaggttgaaatggttacaca  14949600                                                   <---------AHL20(2)                               -                                                  --------->AHL20(2) --------->ARR14(2)             -                                         ----------->GT1             <---------ARR14(2)       -------                                       ----------->GT1   <---------ARR11(3)        <-----------GT1 <-             --------->AHL20(2)   <---------------AGL15  --------->ARR11(3)     ----------->GT1    <-   aactctgagttcaaattgaatactatacaaaatttcacatatagagaaaaaatttaaaagatttcgattcagttccactgaaatgttacaaatcaaattc  14949700                                      --------->ANAC55(2)     <---------ANAC58                 <---------ANAC55(2)                                       -----     <---------ANAC46                <-------TEIL                                          --------->ARR11(3)     <---------ANAC58               --------->CCA1(2)                                    --------->ANAC58 ------->ATHB1                 ---------->DOF2                                           --------->ANAC58 -------->YAB1             --------->TOE2(3)                                           ---------->DOF2 -->GLK1(2)                --------->TOE1(3)                                        <---------TOE2(3) --------ATHB12           ----------->GT1<---------ICU4  ---------->DOF2           --------->DAG2 --------YAB1            <---------TOE2(3)         ----------->GT1  --------->ICU4---------->DOF2   tatcattgtgtgaagaaatcaaaaatcaacgttaaaagatacataatttcgaatagaaacaaagaatggcataatgggatttgataaaggaaagaaattg  14949800                                                               <---------HSFB2a(2)                                                               --------->LBD16                                                               --------->HSFB2a(2)                                                              <---------ANAC46                                                           <---------ARR14(2)                                                           --------->GLK1(2)                                                           --------->ARR14(2)                                                          <---------ARR14(2)                                                          <---------GLK1(2)                                                          --------->ARR14(2)                                                      <------ZmHOX2a(2)                         --------->LBD16             <---------ARR14(2)           ------>ZmHOX2a(2)                         --------->ARR14(2)         <---------ARR11(3)                         <---------At4g35610         --------->ARR11(3)                      <---------ZAT18 <---------HSFC1(1)    <---------LBD16       <---------------AtSPL8                                 < --------->HSFB2a(2)  <---------At5g28300    --------->ALFIN1<---------LBD16              <---------At4g35610 <---------HSFB2a(2)  --------->MYB52(1) ---------->DOF2 --------->At4g35610              --------->At4g35610 ---->ATHB12  ---------->DOF2   --------->ZAT18 <---------ANAC46                         <---------TOE1(1)   attcgagaaatgatctaaaagagttaccggagagtggattagcgaaagtggtgcagatcagattccgcgaagaagagaaggaacgtgaagtccgatgagt  14949900                                                                                      --------->TOE1(2)                                                                                ------>ZmHOX2a(1)                                                                               --------->TOE1(3)                                                                            --------->ARR14(2)                                                                            <---------ARR14(2)                                                                            --------->GLK1(2)            <---------ETT(2)           ---------->ID1------>ZmHOX2a(1)    --------->HSFB2a(1) <------     ---------->DOF2      --------->At4g35610       --------->TOE2(3)     --------->HSFC1(2)  ------- ----------DOF2           <---------At4g35610 <-----------GT1 <-----------HVH21--------->TOE2(3)   <-   tcctttgtaaagagtcgacaaaattcgaagcagagacatttgtttttttttcttcctcaagttttgtcagacgcgaagaatccttaaaccctcgagtata  14950000                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                 <------MYB83                                                 <------MYB46(1)               ----------->GT1      <---------ANAC58                      <------MYB83                     ------->TEIL      <---------ANAC58      <-----------GT1 <------MYB46(1)              --------->TOE1(3) ---ZAT14        *TSS --------->ANAC46 --------->ATHB12  <------------CBF--------->TOE2(3) -->ZAT14  <-----------RAV1(2)        <---------ATHB12  --------->ATHB12----------->RAV1(2) --------ZAT14 --------->ALFIN1<----------DOF2  --------->MYB59       <-----------GT1       <--------   gtgaagttgctcaccaggtgttcgacgaaattactttcaaatcatttggttcggttcttcattggtccaaattaacctgaaccgaaataactaaaattga  14950100                               <---------AHL20(2)                            <---------AHL20(2)                            <---------ARR11(3)                            <---------AHL20(1)                            --------->AHL20(2)                            --------->AHL20(1)                            --------->ARR11(3)                           --------->AHL20(2)                       --------->AHL20(1)                       <---------AHL20(1)                       <---------AHL20(2)            <---------ATHB12                       --------->AHL20(2)          --------->WOX13(1)                    --------->YAB1     --------->ANAC46                                         ----- <-----------GT1 --------->TOE2(3)     --------->ANAC58                                         ----- ----CBF         <----------DOF2       --------->ANAC58                             <---------ZAT6   ttttaactatattttcaaactttaataaaatatattaatccaagctaaatgttcaatcagtgattctaaattatgcattagaattagtgttcaacaaaac  14950200                                                       --------->TOE2(3)                                                    --------->ARR14(2)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               <------MYB83xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                -----               <---------MYB46(3)           <xxxxxxxxxxxxxxxxsmallRNA(s)                        <----               <------MYB46(1)             <xxxxxxxxxxxxxxxxsmallRNA(i)                  --------->ARR11(3)        --------->MYB52(1)<---------At4g35610   <xxxxxxxxxxxxxxxxsmallRNA(i)             <---------ARR11(3) <------MYB83 <---------DEAR3(1)       <<<<<<<ZML2  <---------ARR14(2)                  --------->GLK1(1) <------MYB46(1) ----------->HVH21  --------->HSFB2a(2)--------->TOE1(3)         <---------AHL20(2) ---->ANAC58  <---------AtMYB61     <---------HSFB2a(2)<---------MYB59           --------->AHL20(2) ---->ANAC58  --------->ALFIN1     --------------------->WRI1      <-----------GT1    --------->YAB1   gctaggtgctaaacgggtggtgaccttctgcttagtgcctagaacgcttagtcggaacctaaacattttaaacggttttagaataaaatgatatctattt  14950300                                                                         --------->AHL20(2)                                                                  <---------TOE2(3)         ---------                                                                 <-----------GT1       <---------AHL20(2)                                                                <-----------GT1        --------->AHL20(2)                                    ---------->DOF2            --------->AHL20(2)      --------->AHL20(1)                                 <---------YAB1           <---------AHL20(2)    ----------->GT1 ---->AHL20(2)                <---------YAB1              --------->AHL20(2)   <---------TOE2(3)----- -----AHL20(2)               --------->TOE2(3)         ------->TEIL    --------->AHL20(2) --------->AHL20(2)   atatactactacatgaaatattagaaaaaaacattataaaaagcattcttgaaaacgaatttaaatttaacattttaaaataagataaataaaataataa  14950400                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                       --------->ANAC46                                                                                      <---------LBD16                                                                                  <---------ATERF1(1)                                                                                <---------ANAC58                                                              <-------TEIL      ----------->RAV1(2)                                                         --------->AHL20(2)     <---------ANAC58                                                         <---------AHL20(2)   ------>MYB83                                                       <---------AHL20(2)     ------>MYB46(1)                                                       <---------YAB1      --------->ANAC46                                                       --------->AHL20(2)<---------ALFIN1                                                      --------->TOE2(3)<------ZmHOX2a(2)            <                                --------->AHL20(2)  --------->AHL20(1)--------->ARR11(3)           --                  <---------AHL20(2)             <---------AHL20(2)   <---------ARR11(3)   --------->ANAC58                  --------->AHL20(2)         <---------AHL20(2)       --------->AGP1--------->PCF2 <-          <----------DOF2   --------->ICU4   --------->AHL20(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) >YAB1  <---------YAB1      --------->AHL20(2)   --------->AHL20(2)   <---------ARR14(2)   --------->ANAC58 ----->DOF2 --------->AHL20(2)  <---------AHL20(2)  <---------AHL20(1)--------->ARR14(2)--------->LBD16   aagtatagttatctttatatataatttgaaatatttattttgaaaaattaaaaaaatattaatatacatttagatccacctagcctgccccgcaaaccag  14950500  Previous    Next  AGI:  At5g37590.1    Description:  binding. similar to SPY (SPINDLY), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G11540.1); similar to unknown [Populus trichocarpa] (GB:ABK95240.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 14947728    to: 14950017    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version