Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ANAC46                                           --------->ANAC55(2)                                           --------->ANAC58                                     <---------ANAC58                                   <---------YAB1                                 -------->HAHB4                                                 -----                                 --------->YAB1          --------->MYB52(1)                   -------                                --------->ICU4          --------->TOE1(2)                  --------->TOE2(3)                                <---------YAB1    <---------MYB59                   --------->ANAC58                              --------->YAB1      --------->TOE1(3)                 --------->ANAC58                      <---------YAB1 <---------ANAC58  --------->MYB46(3)           <---------ANAC55(2)               --------->YAB1--------->ICU4--------->ANAC58                         --------->ANAC55(2)               <-----------GT1<---------ICU4      --------->TOE2(3)  --------->AHL20(2)    --------->TOE1(3)  <---------TOE2(3)  <---------ARR11(3)    <---------ANAC55(2) <------ZmHOX2a(1)    --------->ANAC55(1) --YAB1     --------->YAB1 --------->YAB1  --------->ANAC55(1)----------->GT1       --------->ANAC46   tgcaaaggttagattaataacaatatcactgataatgatgcttacacgtaaacctaaacaaacgaggaaaataaactaactcttacacgtaaaccttaac  14914200                                                                                    --------->TOE2(3)                                <----------DOF2                          <---------YAB1                     <---------AHL20(1)                                --------->YAB1           --------->ALFIN1<----------DOF2                 ----------->GT1<---------ICU4    <---------At4g35610 <-----------GT1                   ----------->GT1--------->ICU4   <---------AHL20(2)   ----------->RAV1(1)  <---------AHL20(2)     --------->ANAC46 <---------YAB1      --------->YAB1 ---->MYB46(3)       --------->AHL20(1)--------->AHL20(2)<---------ARR11(3)      <-----------GT1 -->MYB52(1)         <---------ARR11(3)<---------AHL20(2)--------->ARR11(3)   --------->YAB1        <   cgatgcagcataggtgttgacaatattttctttccttttatttaaatagacgacgttgagatgtttaaaattgtcatcatttataaccatattttaagtt  14914300                                                                --------->ATHB12                                                              <---------WOX13(1)                                                            --------->ATHB12                                                            <---------ICU4                                                            -------->HAHB4                                                            <--------ATHB1                                                  --------->HSFB2a(2)                                       <---------MYB59     --------->ICU4                                    <---------WRKY18(1)    <---------YAB1                                   --------->WRKY12  <------ZmHOX2a(1)<---------TOE2(3)                                   --------->WRKY38(1)     <---------ATHB12                      <--- ----------DOF2            <---------ICU4 ---------->DOF2 <---------TOE2(3)                     -----   gtctttatctgaaatatacaaatgttcaattagtacattgacctaaaagtctctaggactaatgattgattagaggtttattttgctagaggttctaata  14914400                                                                                                 ----              --------->ANAC58                               <------ZmHOX2a(2)                 <-----              --------->ANAC46                              --------->ARR11(3)                -------  <---------AtLEC2                                      ---------->DOF2           <---------ARR11(3) --------RAV1(1)    <---------GLK1(2)       <---------ANAC55(2)                   --------->ARR11(3) ---->ARR11(3)--------->ANAC58              ----------->GT1 <---------ARR11(3)   <---------CCA1(2)   tgttgtatggaactagaagcaagattgttttaaactcaatgtcattaagtgaattagagaaagatcatcaaaactcttaaactatatctcccaaaattaa  14914500                                                             <---------YAB1                                                            --------->AHL20(2)                                                            <---------AHL20(2)                                                            --------->AHL20(1)                                                          <---------ATHB12                                                          <---------ATHB51                                                        --------->WOX13(1)                                                      ------------>CBF                        ----------->RAV1(1)         --------->ANAC58                       --------->ZAT18              --------->ANAC58 ----->TOE2(3)     --------->DAG2                   --------->ANAC46                 --------->DAG2 ------GT1        ---------->DOF2               --------->YAB1--------->YAB1        ---------->DOF2 -->AHL20(2)---------->DOF2---------->DOF2 <---------ATHB12--------->YAB1  ---------->DOF2          <   cttaattcagtttgaaaagaaaaagcccacaaagcccaaaactcactcattcataagccaattataatatccaaaataaaagcccataaagcccaaaact  14914600                                        *TSS          <---------ARR11(3)                                        --------->GLK1(1)<---------HSFB2a(2)              ------>ZmHOX2a(1)         <---------GLK1(1)--------->HSFB2a(2)     <---------ANAC58                 ========================HOX2a_HOX2a                >>>>>>>>>TBF1     <---------ANAC58                 <------ZmHOX2a(1)<------ZmHOX2a(2)              >>>>>>>>>TBF1 ---------ATHB12                   <-----------RAV1(2)--------->ARR11(3)           >>>>>>>>>TBF1  <--   cactcattcgtgtctccttctctctcgcacaaatgcttcaggagttctcacaacaagatcgagaaatacacacatagaagacgaagaagaagaagaagac  14914700             ------->GAMYB            --------->ANAC46            --------->ANAC58            --------->ANAC58          <---------ALFIN1         --------->ANAC46                                    --------->ANAC55(2)     <------ZmHOX2a(2)                                       <---------O2     --------->CCA1(2)                 <---------HSFB2a(2)   --------->O2    <---------ARR14(2)                 --------->HSFB2a(2)   --------->ANAC46    --------->AGP1                     --------->HSFC1(1)    --------->TGA1a                       --    <---------ARR11(3)                 <---------HSFC1(1)  <---------ALFIN1                       ---    --------->ARR11(3)             <---------GLK1(2)     <-----------HVH21                      <----    --------->ARR14(2)       <---------At4g35610       --------->At4g35610              <---------ARR11(3) -------ARR14(2)             --------->At4g35610       --------->ZAT2     --------->TOE2(3)    ------   gatacagatccacaacgccatgggtttaggcatcttagcttctcgaacaattcgaccagcttcacgtcttcttcaatctcaaacctccaatttcttcctc  14914800                                                                        <---------GLK1(2)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                      ----------->ARR10                                                                  <---------REM1(2)                                                                 ----------->RAV1(1)                                                                 <-----------HVH21                                                                 ------>NtERF2                                                                ----------->HVH21                                                                --------->ANAC46                                                                --------->RAP2.6(2)                                                                --------->DEAR3(1)                                                                --------->RAP2.3(2)                                                                --------->At1g77200                                                                --------->RRTF1(3)                                                                --------->DEAR4(1)                                                                <---------ETT(1)                                                                --------->RRTF1(2)                                                                --------->RAP2.3(3)                                                                --------->DREB2C(2)                                                               --------->DEAR3(2)                                                               --------->RRTF1(1)                                                               --------->ORA47(2)                                                               <------NtERF2                                                               --------->RAP2.3(1)                                                               --------->ERF1                                                               --------->ATERF1(1)                                                              ------>NtERF2                                                              --------->At4g35610                                                              <---------ATERF1(1)                                                             --------->RAP2.6(2)                                                             --------->DEAR3(1)                                          <---------ZAT2     --------->ATERF1(2)                                          <---------At4g35610--------->RAP2.3(2)                                          --------->ZAT14   --------->ATERF1(1)                                          --------->ZAT2    --------->RAP2.3(1)                   ---                                          --------->At4g35610--------->RAP2.3(3)                <----                                       --------->At4g35610  --------->ERF1 <-----------GT1      <----                                   <---------ARR14(2)       --------->DEAR3(2)                 <-----                                   --------->ARR14(2)       --------->MYB46(3)     --------->HSFC1(1)                                ------>ZmHOX2a(1)          <---------At4g35610     --------->HSFB2a(2) ------->ANAC46               <---------LBD16              --------->At4g35610     <---------HSFC1(1) ------>LBD16                 ----------->RAV1(2)     =======================RAV   <---------HSFB2a(2) -----LBD16         --------->GLK1(1)  <---------At4g35610 <---------ATERF1(1)     ------>ZmHOX2a(1) >ZmHOX2a(1)        --------->At4g35610--------->LBD16----------->RAV1(2)--------->GLK1(2)    <------   cgcacaatcgtctcaaaaccagagctccaatctcctgaatccgctgctgtctctgagcctgagccgccgacacagattctccctcctagaaaccctgtag  14914900                                                                <---------WRKY38(1)                 <---------HSFB2a(2)                            <---------WRKY12          <---------ZAT18                                       <---------WRKY45      ------->MYC3                                             --------->WRKY18(1)      <-------MYC3                                        --------->ANAC55(2)      <-------MYC2                                        <---------ANAC46      ------->MYC2                                     --------->ARR14(2)     --------->ANAC58    ==================HOX2a_HOX2a<-------GAMYB            <---------ARR14(2)     --------->ANAC58--------->ARR14(2)          --------->ETT(2)---------->DOF2   <---------At5g28300 ------>ALFIN1   --------->HSFB2a(2)        <----------DOF2   <--------ZAP1   <------ZmHOX2a(1) --MYB46(1)<---------ALFIN1              <---------ARR11(3)   <-----------HVH21--------->ARR14(2) --MYB83  --------->ZAT18------>ZmHOX2a(1)xxxxxxxxxxxxxxxxxx>smallRNA(fl3)---------->DOF2       <---- ----AtMYB61     --------->HSFC1(1) <------ZmHOX2a(2)<---------MYB46(3)   --------->MYB52(1)    <---- --P --------->ANAC46<---------ARR14(2)  --------->ARR11(3)   --------->At5g28300 <-----------GT1   gtggagcacgcgtccacttctcgaatcctgaagatgcgatcgaggtctttgtcgatggttacgcggtcaaagtccctaaaggattcactgttcttcaggc  14915000       --------->At4g35610      <---------DEAR3(1)     --------->ZAT18                                     --------->HSFB2a(2)       <---------TOE2(3)   <---------bZIP60(1)                                   <---------HSFB2a(2)       <---------TOE1(3)   --------->bZIP60(1)                                  <---------ANAC46           <---------AtMYB61   <---------bZIP60(2)  --------->LBD16          <<<<<<<<<GATA-1            <---------ANAC58  <---------AtMYB61    --------->LBD16         <---------CCA1(2)     <------ZmHOX2a(1)             -- -----ANAC58      --------->GLK1(1)  --------->YAB1     <---------ANAC58    <---------ANAC58--------- -----ANAC58      <---------GLK1(1) <---------YAB1      <---------ANAC58    <---------ANAC46<--------   ttgtgaggtcgctggagttgatatcccgaggttttgttatcattctcgtttatctattgctggaaattgcaggatgtgtcttgttgaggttgagaaatct  14915100  Previous    Next  AGI:  At5g37510.1    Description:  EMB1467 (EMBRYO DEFECTIVE 1467); NADH dehydrogenase. Identical to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9FGI6;GB:Q940B1); similar to hypothetical protein OsI_012866 [Oryza sativa (indica cultivar-group)] (GB:EAY91633.1); similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (Complex I-75 kDa) (CI-75kD) (76 kDa mitochondrial complex I subunit) (GB:Q43644); similar to unnamed protein product [Vitis vinifera] (GB:CAO17062.1); contains InterPro domain NADH-quinone oxidoreductase, chain G, C-terminal (InterPro:IPR015405); contains InterPro domain NADH dehydro Range:  from: 14914640    to: 14917887    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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