Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->MYB59            <---------TOE2(2)            <---------TOE2(3)                                     --------->YAB1          XXXXXXXXXXXXXXXXXXXX>MIR778               --------->ARR14(2)   --------->WOX13(1)    <---------HSFB2a(2)                            <------ZmHOX2a(1)   <---------YAB1    --------->HSFB2a(2)                        ---------->DOF2  <-----------GT1   ---------->DOF2 ------->MYB52(2)                            <---------YAB1<----------DOF2 <---------ATHB12 --------MYB46(3)                         <-------TEIL   <---------At4g35610--------->YAB1 ----MYB46(3)     <---------YAB1     <---------MYB59<---------ARR14(2)--------->TOE2(3)   ttcgttccaaaacttaggttatgaacaccgagtttgcgacctgattcatgaaaggattcagcttttaaacatcatcaatcatacaaaagaatatagcaaa  14885600                                                                            ------->GAMYB                                                                        --------->REM1(1)                                                                        --------->MYB46(3)                                                                       ------>MYB83               <---------YAB1                                          -------->P             <--------HAHB4                                          --------->TOE1(2)              -             --------->ATHB12                                     <---------ARR14(2)                -             <---------ICU4                                       --------->ARR14(2)              ---            <---------YAB1             <---------ZAT6       <---------TOE2(3)                    <---        <---------WOX13(1)    --------->ANAC46   --------->ANAC46<------ZmHOX2a(1)      --------->YAB1      --------->ATHB12   --------->TOE2(3)     <-----------GT1<------ZmHOX2a(1)         --------->AHL20(2)     <---------YAB1<---------ZAT6  <---------ATHB12    <----------DOF2 ------>MYB46(1) <---------ATHB12   acagagtttgattgatcattagtgtaatctaaacccaattagtgacaaattacacaacttttaaggaggaacctacaacccaattaccaataaaaaccca  14885700                                                                     --------->ARR14(2)          --------->ARR14(2)                                         <---------ARR14(2)          <---------ARR14(2)                                   --------->ZAT2                  <-----         --------->GLK1(1)                                     <---------At4g35610             ------   ----------->RAV1(1)                                         --------->At4g35610           <------- --------->MYB46(3)     --------->TOE2(3)  --------->YAB1      <---------ZAT2                -------- -------->ANAC58        --------->TOE1(3) <---------ZAT6 --------->ANAC58                   --------- -------->ANAC58     <-----------GT1      ----------->GT1--------->ANAC58                  <--------- ------->DOF2 ------>ZmHOX2a(1)     <---------ICU4     <---------ANAC58                   ------->GAMYB ------ATHB12--------->TOE2(3)--------->ANAC46         <---------ANAC58                  --------->MYB46(3)   tcaagcaccacaaatcctaaatctaaccttacacaaaatcagtactgataaatattggcatgcccagctcggattcaattcgatgaattcaacagtcaag  14885800                                                                      <------NtERF2                                                           <------MYB83                        ------                                                           <------MYB46(1)              ----------->RAV1(1)    ---------->DOF2                                       --------->MYB59               --------->AtMYB61 ----ANAC55(2)                   --------->TOE1(2)        --------->MYB46(2)          ----------->RAV1(1) ----->GT1                      ----------->RAV1(2)       --------->MYB111(1)  <---------GLK1(1) <--- --ZAT14              --------->ANAC58             ------>ZmHOX2a(1) --------->LBD16  ------>NtERF2 ->ZAT14              --------->ANAC58         --------->ARR14(2) <---------At4g35610--------->DEAR3(1) >WRKY18(1)       --------->ANAC58             <---------ARR14(2) --------->At4g35610--------->ANAC46 --HVH21          --------->ANAC58    ---------->DOF2    <--------P<---------LBD16   <---------ALFIN1   tgaaattgaagcgaatggagacggaagaaacagtacctgagaaaggctgaatcctgaaggtaggtttcagccggagaatagaaatcgccaccacaaaaaa  14885900                                   --------->ANAC58            <----------DOF2        --------->ANAC58           <---------ANAC58      --------->MYB52(1)         ------->TEIL         --------->ANAC58                         <----------DOF2      <---------REM1(1)       --------->ANAC58                         *TSS      <---------ARR14(2) -     --------->ARR11(3)  --------->At4g35610                 <-----------GT1     --------->ARR14(2) < ---------->DOF2         <---------At4g35610           <---------TOE2(3)       <---------AHL20(2)   - --->MYB52(1)        ----------->HVH21                 <---------TOE1(3)      --------->YAB1       -- -------ID1<---------ANAC58   --------->ANAC46      ----------------------->TaNAC69(2)    <---------AHL20(2)   cgaaaaagatgtagctttccgatgtgaagcagacgaaacgacaacgaagatggattttaggtttttctcttctctttctataatattcgcatttaagtgg  14886000                                                                                                   --                                                                <---------ANAC58                   <-                                                           <------------CBF                        <-        <---------AHL20(2)                          ------>MYB83<---------ANAC46             --------    <---------AHL20(2)        <------------------------ANAC81   <---------ANAC58            <--------    --------->AHL20(2)     <-----------GT1        <---------MYB59                           --------- -------->AHL20(2)        <-----------GT1         <---------MYB46(2)                 <---------------AGL15 ---------AHL20(2)     <---------ICU4<----------DOF2------>MYB46(1)                  --------------->AGL15 -------->ATHB51     --------->ANAC55(2)         --------->ANAC55(2)                <---------------- ------->ICU4        <---------ANAC55(2)         <---------ANAC55(2)               <---------ANAC55(2)   aattatttatattttttaaaaatacttatttcccttcttctttttttgatcacctaatttgaattggcttaaactttttaaaattacctatatttaggta  14886100    <-----------GT1                                                                             <---- ------->AHL20(2)                                                                               <---- --------AHL20(1)                               ---------->DOF2                                ------ --------AHL20(2)                              --------->AHL20(2)                              <----- ->ANAC55(2)                               --------->AHL20(2)                                  ------ -TOE2(3)                                 --------->AHL20(2)                              <---------AHL20(2) >MYB59                <---------ZAT6     <---------AHL20(2)                              --------->AHL20(2) -AGL3   <----------DOF2        --------->TOE2(3)         ----------->GT1   ---------->DOF2   -------   ttttattttctcttttgttttgtcagtgttatattcttaacaaaataaataaaagaacaattgttaaaaaaaaaacataaaagaacaattgtttaaatat  14886200                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                       <---------AHL20(1)                                                       --------->AHL20(1)         <---------TOE2(3)                       --------->YAB1        <---------AHL20(2)         --- --------->YAB1                             --------->AHL20(1)         --------->AHL20(2)        ---- -----AHL20(2)                              --------->AHL20(2)  <---------TOE2(3)              ------ -----YAB1                                 --------->YAB1 <---------YAB1                     >>>>>>>> --->AHL20(2)                            --------->AHL20(2)     <---------TOE1(3)         <---------TOE2(3) ----AHL20(1)     <-----------GT1   --------->AHL20(2) <---------AHL20(2)           --------->AHL20(2) --->AHL20(1) --------->YAB1       --------->AHL20(2)  --------->AHL20(2)           <---------AHL20(2) -->YAB1 <---------YAB1       <---------MYB59 --------->YAB1   <-----------GT1  <---------TOE2(3)<---   aattcataactaagattaataaacattttggaccaaaataaaaaaaaataataagaatttatttttaacgaaattaaaaatttagattaattaagaaaaa  14886300                                                       ----------->GT1    <---------AHL20(2)                            <---------YAB1 ------>AHL20(2)            --------->YAB1      <---------ICU4 ----->AHL20(2)            <---------YAB1       <---------------AGL15 --->YAB1    <---------AHL20(2)                --------->ICU4                             --------->AHL20(2) >>GT-3b     --------->AHL20(2)  --------->At4g35610 <---------YAB1  --------->YAB1   <---------YAB1 ------AHL20(2)       <-----------GT1 ------->TEIL<---------AHL20(2)<---------YAB1  --------->YAB1   taattttaaaatgatataaatttttaactatcatcagatgtatttcataaatattattagtaaaacgattttcataagacttccaattttgatataatac  14886400                                     --------->TOE2(3)                            --------->DAG2     --------->AHL20(2)                           ---------->DOF2     <---------AHL20(2)                       --------->TOE2(3)       --------->AHL20(1)         ----------->GT1                       --------->TOE1(3)      --------->AHL20(2) <---------YAB1 --------->RVE1(1)<---   aaagacttgaacaaaaacaaaaaaacctaaaaagctaaaccacaaaaaaaaaattgaaaacttagtttttattagaaggaaaatatcactcgataacatt  14886500  Previous    Next  AGI:  At5g37475.1    Description:  translation initiation factor-related. similar to translation initiation factor-related [Arabidopsis thaliana] (TAIR:AT1G66070.1); similar to unknown [Populus trichocarpa] (GB:ABK92969.1); contains InterPro domain Translation initiation factor eIF3 subunit (InterPro:IPR013906) Range:  from: 14883287    to: 14885971    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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