Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <------NtERF2                                                                                  <---------DEAR3(1)         <----------ID1                                                        <---------bZIP60(1)     ---------->DOF2                                                           <---------O2   <---------YAB1                                                              <---------ANAC58 --------->GLK1(1)                                                             --------->bZIP60(1) --------->CCA1(2)                                               --------->LBD16 <------NtERF2 -------->ARR14(2)                                               ----------->GT1<-----------HVH21 ---------ARR14(2)                                             <---------LBD16 <---------ANAC58 ------>LBD16             --------->MYB52(1)                 <-----------GT1   <---------ANAC46 ------ANAC46         --------->ANAC58                <---------WOX13(1)      <------NtERF2 ------ANAC58         --------->ANAC58               <------------CBF  <------------CBF ------ANAC58       --------->MYB52(1)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------TGA1a -----LBD16  ---------->DOF2        ---------->DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------O2   cggatatgaaagagacaaagacgaacgaaaacggagaagaaagaagaagagaagagattgatttttccggtgaaattggtgtcgtcggagacgagagaag  14851200                                                                                               xxxxxx                                                                                            xxxxxxxxx                                                                                         <xxxxxxxxxxx                                     --------->DAG2                                     --------->AHL20(2)                                    --------->DAG2                <-----------GT1      <---------AHL20(2)                                   ---------->DOF2         <---------TOE2(3)          xxxxxxxxxxxxxxx                         <---------HSFB2a(2)               <---------TOE2(2)       xxxxxxxxxxxxxxxxxx                <------ZmHOX2a(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)           --------->At5g28300  ------>NtERF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <---------TOE1(2)     ----------->GT1 --------->DEAR3(1)      --------->HSFB2a(2)          <-----------GT1      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   acgacgacggagagaagaggaagaagtcgagaagttgaaaaggggaagaacattttttacttaggttttttctgtagtttctagggtaaataatataact  14851300                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                  --------->ATHB12                 <---------YAB1         <-----------GT1                                     <---------ANAC46         <---------AHL20(2)                                  <---------ANAC58     <---------ANAC58      <---------ICU4                                        xxxxxxxxxxxxxxxx>smallRNA(i)    <---------ARR14(2)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ------>ZmHOX2a(1)    --------->ARR14(2)     <---------MYB59          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->TOE2(3) xxxxxxxxxxxxxxxxx>smallRNA(le3)                  <---------ANAC58                <---------ANAC58 xxxxxxxxxxxxxx>smallRNA(le3)                     <---------ANAC58<---------ARR14(2)   <----------DOF2 xxxxxsmallRNA(i)<---------AHL20(2)               <---------ANAC46--------->ARR14(2)   ------>ZmHOX2a(1) xxxxxxxx>smallRNA(si3)  ------>NtERF2           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)---------->ID1 xxxxx>smallRNA(si3) <-----------RAV1(1)    <---------TOE2(3)<---------ANAC58   <-----------GT1   <--   ggggcgaatatttacattttttattggtgcctaaatctaacaaattaagttttcttgtagttttcgtggtttcgcaagagtttttcgtcctttcctcatt  14851400                                                 <---------ICU4                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                              --------------->AGL15                             ----------------->AGL2                    --------->YAB1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   <---------ATHB12 xxxxxxxxxxxxxxxx>smallRNA(s)          --------->YAB1<---------YAB1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          --------->AHL20(2) <-----------------AGL1 <-----------GT1       --------->YAB1--------->AHL20(1)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <---------YAB1--------->AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               <---------GLK1(2)     --------->AHL20(2) <---------AHL20(2)      --------->ICU4     <xxxxxxxxxxxxxxxxsmallRNA(s)     <---------AHL20(2)<---------AHL20(1)       <---------YAB1     <xxxxxxxxxxxxxxxxsmallRNA(i) ---------GT1  ------------>CBF    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      --------->ALFIN1   tttcgattttaataaaaatcaataatattattccaagaatggcacgagtgattatttcttctcaaatagtggcataagaggtgagccttccaaattcttc  14851500                             --------->GLK1(2)                            <---------GLK1(2)                                            ----------->HVH21                            <---------ARR14(2)                                         --------->LBD16                            --------->ARR11(3)                                       <---------LBD16                           --------->HSFC1(2)                                      --------->ARR14(2)                           <---------HSFC1(2)                                      <---------ARR14(2)                           --------->HSFB2a(1)                               <---------ARR14(2)                           <---------HSFB2a(1)                             <---------HSFB2a(1)                          ----------->ARR10                       ------------>CBF --------->GLK1(2)                       --------->LBD16                   <---------HSFB2a(2) --------->ARR14(2)            <---------ATHB12--------->ARR14(2)           --------->HSFB2a(2) --------->GLK1(2)    ---------->DOF2   <---------HSFB2a(2)               <---------LBD16    --------->HSFC1(2) --------->TOE1(3)    --------->HSFB2a(2)              <---------LBD16     --------->HSFB2a(1) --------->TOE2(3)   <---------LBD16       ----------->GT1--------->LBD16  <---------HSFC1(2)     ---   aacccttaaacccattcattttctccagaagattctgagacgaagaggcaaaattttctcgggaaaatggcaatggaagaatccgattccggtgaaacag  14851600                                                        --------->MYB52(1)                     <---------ANAC46                 --------->MYB46(3)              ---------->ID1                         --------->ANAC58            <---------ANAC58                         --------->ANAC46            <---------ANAC58                         --------->ANAC58 ----------->GT1    <---------TOE2(3)    <---------ANAC58 ------->GAMYB<---------CCA1(2)          <---------ANAC58                                      ------ ------>MYB52(1)    <---------TOE1(2)<----------DOF2 --------->AtLEC2                        --------   caacggcaaaaatttcgtctcttacgttgaaatctagggctatacttgcgactccaagcaacgaagaaatagcgattatcgtcgaacaagtctatacacc  14851700                                                                               <---------GLK1(2)      --------->TOE1(2)                                                    ---------->DOF2   --------->GLK1(2)                   <---------GLK1(1)                --------->TOE1(3)   <---------ARR14(2)           ----------------------->TaNAC69(2)      --------->TOE2(3)   --------->ARR14(2)       <---------ZAT2            <----------DOF2  --------->ZAT6 --->ANAC46                 --------->ZAT2   <---------ANAC58     <---------ANAC58      --------->At5g28300 ->ANAC46             --------->At4g35610    <---------ANAC58     <---------ANAC58 ----------->HVH21   tcaagaatccgacgaacacaaatcagcgcgagctctgttcgatttctgcgtctctactttcccaaattgcttaaccctaaagcttctcacggtgtatcga  14851800              <---------GLK1(1)              --------->GLK1(1) ------>ZmHOX2a(2)         ------>NtERF2  <---------YAB1                      ---------->CDC5        --------->DEAR3(1) <------ZmHOX2a(2)          ---------->DOF2              <-----------GT1   ttttcttccgacgacgatttccgattacgatcgatctgtcttctaactgaaactctaaaagctcagcgattcgaactctctcttgtcactctccatgaaa  14851900                     ----------->HVH21                   <---------AtLEC2                   <---------ANAC58                                -------->ATHB1                   <                   <---------ANAC58                                --------->ATHB12            <-----               <---------ANAC58                                    <---------ICU4         --------->DAG2               <---------ANAC58    --------->TOE2(3)              <---------YAB1         ---------->DOF2            --------->GLK1(1)      --------->TOE1(3)             --------->GLK1(2) --------->At4g35610         <---------YAB1    --------->AtLEC2             <---------GLK1(2)   <----------DOF2    <-----  --------->MYB46(3)<---------WOX13(1)              ---------->DOF2--------->YAB1  <---------At4g35610   tcaaaccacttctgatttcttgcttgacaatgcaaaaccctaaatattgtgactcaaagattgtgagaatcattgtttctttagtagctgataaagttgg  14852000                                                                                              -------                                                                                             --------                                                                   <----------DOF2          <-------- ---------ANAC46      --------->ZAT14         ------>ZmHOX2a(2) --------->ARR11(3) <---------ICU4 -MYB83  --------->CCA1(2)                 --------->YAB1<----------DOF2           --------->YAB1 -MYB46(1)      --------->ATHB12          <---------ATHB12      <---------ARR11(3)--------->ICU4   tgtctgggaagagatgagtgattgtatactctcacttgttgtcaatgatccgattagggcttttgaggtctttatccaattgccatcatcactctacgga  14852100  Previous    Next  AGI:  At5g37400.1    Description:  binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G37650.1); contains InterPro domain Protein of unknown function DUF577 (InterPro:IPR007598) Range:  from: 14851573    to: 14853576    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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