Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  <--                                                                                                  ---                                                                                                <----                                       <---------ATHB12                                      --------                                --------->MYB46(3)                                           <-------                                <---------MYB55(2)                                           <-------    ------>ZmHOX2a(2)    --------->ZAT18                                                     <-------   --------->GLK1(1)     --------->ZAT14                                                     --------  <---------ARR11(3)     <---------ZAT14--------->YAB1                                      <--------  --------->ARR11(3) --------->ZAT6 --------->AtMYB61                                       --------- ------>YAB1    --------->TOE1(3)------->GAMYB              ------>MYB46(1)                 --------- ---->DOF2     ----------->GT1 -------->P                   ------>MYB83                    <--------   agatgatctccataagaagcttaaaactacactaaccaccaatgacattcactaattagacctacaaatttgtcattccaattctcactatccaataatt  14793000                                                                           <---------GLK1(1)   --------->YAB1                                                          <------ZmHOX2a(2) -------YAB1                                                               --------->GLK1(1) -------ANAC55(2)                                                         <---------ARR11(3) ------>ANAC55(2)                                                         --------->ARR11(3) -------GT1                                                               --------->ARR14(2) ->YAB1                      <------ZmHOX2a(1)                            --------->ARR14(3) -HAHB4                    <---------TOE1(3)                              <---------ARR14(2) -ATHB1                    <---------TOE2(3)                             <---------GLK1(1) --ICU4<---------ZAT2   <---------YAB1                          --------->DAG2   --------->ANAC58 ->ATHB51            --------->ICU4                            ---------->DOF2   --------->ANAC46 -ATHB51        ----------->GT1                             --------->ANAC46     --------->AtLEC2 >AHL20(2) <---------HSFB2a(2) --------->GLK1(1)            --------->ANAC58     --------->ANAC58   - >ICU4 --------->ZAT2<---------YAB1                         --------->ANAC58------>ZmHOX2a(2)      -- -ATHB12   --------->HSFB2a(2) <---------GLK1(1)    --------->YAB1       --------->GLK1(1)   --------   acgaatcagagctcgagaatgttattattaaggaaatcaaattcaaaattcgaatcagaaacacgaaaagcgaagagatctccatgcaattgaaatcaaa  14793100                                           ------>ZmHOX2a(2)                                          --------->CCA1(2)                                          <------ZmHOX2a(2)                                         --------->ARR14(2)                                         <---------ARR11(3)      --------->TOE1(2)                                         <---------ARR14(2)      <---------LBD16                                         --------->ARR11(3)     ===================================bZIP_DOF                                         <---------AGP1         <---------TGA1a                                         --------->AGP1        <---------ARR14(2)                                        <---------CCA1(2)   --------->DEAR3(2)                                   <---------At4g35610    ------>NtERF2            ----------->GT1        --------->At4g35610 --------->At4g35610                      <----            <---------ANAC55(2) ---------->DOF2        <---------At4g35610   --------->MYB52(1) <---- ---------->GT1                 ==========================================bZIP_DOF --------->SPL7  -- ------->YAB1       --------->MYB52(1) ----------->ARR10 --------->ZAT18  <---------YAB1        <---- ->YAB1    <-----------------------TaNAC69(2)       --------->CCA1(2)  --------->ICU4   <----------DOF2   atcagaaaaaaaaaacgtgaaataactgaaaatcgaaagctcagatctgaatagataagcggacagacctgggattatgaaacggtccgactttgttagc  14793200                                                                                                  ---                                              <------NtERF2                                      <---                                           <------NtERF2                                         <---                                           --------->ATERF1(1)                                  -----                                          <-----------HVH21                                     <----                   ------>MYB83          --------->DEAR3(1)                                     -----                   ------>MYB46(1)      <------NtERF2                                           <----                  --------->ORA47(1)    --------->DEAR3(2)                                      -----                 <---------MYB46(2)     --------->RAP2.3(1)      <---------ANAC46               =====                 --------->MYB46(3)     --------->ATERF1(1)      --------->DEAR3(1)             -----                 --------->DEAR4(1)    <---------ATERF1(1)    --------->ANAC58                  <----           <---------ICU4     --------->At5g28300  --------->MYB52(1)                           -----     =====================================HOX2a_HOX2a  --------->LBD16                          <----     <------ZmHOX2a(1)    --------->MYB52(1)<---------DEAR3(1)--------->ANAC58                  ----- -----ANAC58     ----------->HVH21     ------>NtERF2 <---------LBD16                            ----- -----ANAC58     --------->DEAR3(1)   <---------ARR14(2)   <---------ARR14(2)     ----------->RAV1(1) -------->DOF2   --------->DREB2C(2)  --------->ARR14(2)   --------->ARR14(2) <------ZmHOX2a(1)<----- -----ANAC46    --------->DEAR3(2) ------>ZmHOX2a(2)--------->MYB52(1)  <------ZmHOX2a(1)    --------   gtaaagaggaacatcatcaccgaccttgtaacggtgatcggagccgtcggagataaccggagaaacgccgtagaggaagaggaacaccagaagaagcgac  14793300 ------>TGA2(2) --------HVH21 --------TGA1 ---->ANAC58 -----O2                                                          <---------MYB46(3) ---->TGA1a                                                    <------MYB83                        <- -----TGA1a                                                    <---------ANAC46                  <--- ---->TGA2(1)                                                  <------MYB46(1)                  <---- ============================================bZIP_DOF         --------->MYB55(2)                ----- ---->bZIP60(2)                                               <---------MYB46(3)              <------ -----bZIP60(1)                                               <------MYB46(1)                <------- ---->bZIP60(1)                                               <------MYB83                   -------- -----TGA2(1)                                                 --------->MYB59              --------->YAB1 ---->O2   <---------------AtSPL3                           <--------P                    <-------TEIL ---->ANAC58                                                <---------MYB52(1)      <------ZmHOX2a(2) ------STF1<---------------AtSPL8                          <-------GAMYB           <---------ARR11(3) --->HVH21 --------------->AtSPL3 ---------->DOF2         <---------MYB46(3)       --------->ARR11(3)   gtcatcgaaggaagaagtaccattagaaattagagagaaagagagagagagaggtttaagcggttgggtcgatgaagatgatgaagatcaaattcatgat  14793400                                         --------->ANAC58                                         --------->ANAC46 --------YAB1                        *TSS--------->ANAC58           --------->ANAC46 ------ICU4                          --------->AtLEC2              <---------TOE1(3)   <----------DOF2 -----YAB1                       --------->LBD16                   <---------TOE2(3)<-----------GT1 ---->ICU4                      --------->ANAC58          <---------DAG2           ---------->ID1 ---ICU4                        --------->ANAC58          <----------DOF2    <---------DAG2 --YAB1                         --------->ANAC46       <-----------GT1       <----------DOF2 ->ICU4   <---------YAB1       <---------LBD16  ------------>CBF  <---------DOF5.7(2)  <---------DAG2   tatgagtgagtgatgagagactgatttttgttctccgcaatgcaagtcatgtcaattttactttttgttaacgaaaccactttttgtcactttttcattt  14793500                                                                                                    <                                                                                                  <--               <---------AHL20(2)            <---------AHL20(2)                               <------              --------->AHL20(1)            --------->AHL20(2)                                <------              <---------AHL20(1)        <---------AHL20(2)                                   <-------           <-----------TBP           --------->YAB1                                          --------           <---------AHL20(2)        ----------->GT1   <---------AHL20(2)                   ---------           --------->AHL20(2)   <---------YAB1     <---------AHL20(2)    <---------WOX13(1)<---------YAB1         <-----------TBP        ------------>CBF  <---------AHL20(2)   --------->ATHB12  <---------ICU4 <---------TOE1(2)            --------->YAB1<---------AHL20(2)----------->GT1            --------->YAB1   tcccaagttttatttatatattttgttttgaattatcaatagtaaatttttttttatttttttttggttaaattgatttatgtataatcgataatgatat  14793600                                                     <---------ZAT14                                                   --------->ANAC46                                                <---------ZAT14                                                <-------TEIL                                        <                                                --------->ZAT18                                     - -----------GT1<------MYB46(1)              --------->DAG2                              ------------- -------AHL20(2) --------->ALFIN1           <---------------AtSPL8                      <------------ ---CCA1(1)    <------MYB83                ---------->DOF2                             <---------ANAC58 ---RVE1(1)    <---------ANAC46<------ZmHOX2a(1)--------->ZAT14                        <---------ANAC58 --ARR11(3)    --------->ANAC55(2)         <---------ZAT14                    --------->AtLEC2     <x ->ARR11(3)    <---------ANAC55(2)     <------ZmHOX2a(1)   <----------DOF2    ----------->GT1    <--- >YAB1         <---------ANAC55(1) --------->TOE1(2) --------->ZAT14     --------->ETT(2)  ----------   tttaactatctcacattaggtgttgggattagaggaaactaggagtaaagtacactgcaatctttttggtttttgtagacatgtaaattgcttcaaagag  14793700                          <---------ZAT18                        <------NtERF2                        <xxxxxxxxxxxxxxxxsmallRNA(i)                        <---------At4g35610                        --------->At4g35610                       xxxxxxxxxxxxxxxx>smallRNA(s)                       xxxxxxxxxxxxxxxx>smallRNA(i)                      xxxxxxxxxxxxxxxx>smallRNA(i)                     --------->ATERF1(1)                     <------NtERF2                                                      --------->At4g35610                    <xxxxxxxxxxxxxxxxsmallRNA(s)                                --------->YAB1     --            ----------->HVH21                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     --           xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---           xxxxxxxxxxxxxxxx>smallRNA(s)          xxxxxxxxxxxxxxxx>smallRNA(s)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          xxxxxxxxxxxxxxxx>smallRNA(i)           <---------LBD16            <---------MYB46(3)------>NtERF2          --------->At4g35610 ---------->DOF2    xxxxxxxxxxxxxxxx>smallRNA(i)<------NtERF2   --------          xxxxxxxxxxxxxxxx>smallRNA(s)         xxxxxxxxxxxxxxxx>smallRNA(i)<---------ANAC46--------->At4g35610     <------ZmHOX2a(1)xxxxxxxxxxxxxxxx>smallRNA(s)       <xxxxxxxxxxxxxxxxsmallRNA(i)   <---------At4g35610 ---------REM1(1)   <xxxxxxxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxx>smallRNA(i)----------->GT1------>NtERF2 -------->ALFIN1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxxsmallRNA(s)  <xxxxxxxxxxxxx -->AGL15<---------ARR14(2)------>NtERF2     xxxxxxxxxxxxxxxx>smallRNA(s) <---------LBD16  <---------At4g35610 ---AGL15--------->ARR14(2)<xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxsmallRNA(s)   --------->MYB46(3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <---------AHL20(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------------------TaNAC69(2)    ----------->GT1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------LBD16 >DOF2  <------ZmHOX2a(1)<xxxxxxxxxxxxxxxxsmallRNA(i) <xxxxxxxxxxxxxxxxsmallRNA(s)  xxxxxxxxxxxxxxxx>smallRNA(s)   aagtgtaggaggaactgactggaggcagcggacaaagcggtataatttatctgcggtttagtccatctcatttttgggcggataataaaccgctgcggac  14793800                                                                   --------->ATHB51                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                             ------>NtERF2                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            --------->LBD16                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                            <---------ZAT18                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                          <---------At4g35610                                                          <---------LBD16                                                          --------->At4g35610                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                          --------->ZAT14                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    xxx                                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <xxx                                                       <xxxxxxxxxxxxxxxxsmallRNA(i)             -----                                                      --------->AtMYB61        --------->At5g28300---                                                      <xxxxxxxxxxxxxxxxsmallRNA(s)   --------->AHL20(2)   --------->AHL20(2)                                 <---------ALFIN1   <---------YAB1         xxxxx   <---------AHL20(2)                                --------->MYB46(3)xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)  <---------AHL20(1)                                --------->SPL7 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)  --------->AHL20(1)                               <---------PCF5 <---------YAB1    --------->AHL20(2)  <---------AHL20(2)                             --------->HSFB2a(2) <---------WOX13(1)  --------->MYB52(1)  --------->AHL20(2)                             <---------HSFB2a(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) ---->MYB46(1)          ------>NtERF2  <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxx ---->MYB83           <xxxxxxxxxxxxxxxxsmallRNA(s)--------->LBD16xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) - ------MYB59         <---------At4g35610        <---------LBD16xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<-- ->LBD16   ----------->GT1      <-----------GT1xxxxxxxxxxxxxxxx>smallRNA(i)   ----------->GT1 xxxxxxx xxxsmallRNA(s)      --------->At4g35610xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   caaatttatttgtatgtaaaaaccgctgcggttttttctattttttttggtccggaccactgcggactataattgatgaatggtaaataaaaaacggtct  14793900  Previous    Next  AGI:  At5g37310.1    Description:  transporter. similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT1G14670.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT2G01970.1); similar to Putative endosomal protein [Oryza sativa (japonica cultivar-group)] (GB:AAK52585.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42436.1); similar to unknown [Picea sitchensis] (GB:ABK24901.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) Range:  from: 14789742    to: 14793437    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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