Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->HSFC1(2)   <---------At4g35610   <---------HSFC1(2)   <---------ZAT2   <---------HSFB2a(1)   --------->At4g35610 <--------P -------TOE1(2)                                                                                   <-- -TEIL                                                                                      --------- ->ARR14(1)                                                          <---------KAN4(2)      <-------- >ARR14(2)                                                          --------->YAB1         <---------TOE1(2) >ARR11(1)                                                    >>>>>>>>>TBF1               <---------MYB52(1) -GLK1(2)       --------->TOE1(1)                     <---------ANAC46--------->ICU4    <---------ANAC58 -ARR14(2)      --------->TOE2(1)                <---------AtLEC2>>>>>>>>>TBF1  --------->TOE2(3) <-- >ARR10        ------>ZmHOX2a(1)   ---------->DOF2    <---------REM1(1)--------->YAB1   <---------ANAC58   aaggtagcttcgacatcctcgtagccacttgtagtctcaaagtttcggtttccatggtgtagaagaagaagaatgatcaaaaccctagtttcgttcgttt  14779200     ---------->DOF2        ---------->DOF2   --------->ANAC58    <---------AHL20(2)                                                        <---   --------->ANAC58    --------->AHL20(2)                                                        ----  XXXXXXXXXXXXXXXXXXX>MIR156G                                                              <---------YAB1 -------ETT(1)   --------->ANAC58              ---------->DOF2                           --------->At4g35610 >MYB52(2)       --------->ANAC58           <---------ANAC46                <------------CBF     <--- -MYB46(3)       --------->ANAC46       <------------CBF               ----------->GT1   <---------At4g35610 --------ID1     --------->ANAC55(1) <------ZmHOX2a(2)                 <---------ZAT6  <-----------RAV1(2)   gcgacaagaaagagagaacacgaaattaaacaaagagagatcgattgtgtaaagagagaaacagagaatgagagtgtaaattgttatcttcagatgattc  14779300                                                           <------------CBF     <---------YAB1                                      <---------AHL20(2)    --------->AHL20(1)                              --------->DOF5.7(2)              <---------ICU4    <---------AHL20(1)          --------->GLK1(2)   <---------MYB52(1)               --------->YAB1    <---------AHL20(2)          --------->ARR14(2) --------->At5g28300              --------->ICU4   --------->AHL20(2)          <---------GLK1(2)  ----------->GT1                   <---------ATHB12 ------ANAC58               --------->ANAC46--------->TOE2(3)           <-----------GT1 ----->TOE2(3)       <---------AHL20(2)     --------->YAB1--------->ATHB12    ----------->GT1<------- ------ANAC58       --------->AHL20(2)      --------->TOE1(3)      <----------DOF2--------->WOX13(1)   cttgattatatttacacagagatttaatatacagaatccaagttaatcttaaccgttaattcattgtttctttttttctgtagttaatcatggccgttta  14779400                                 <-----------HVH21                          --------->TOE1(3)                   ----------->GT1                   <---------MYB46(3)                                       --------->LBD16         <----------DOF2  --------->TOE2(3)                                <---------LBD16     <-----------GT1      --------->YAB1                                  <---------LBD16  <---------ICU4 <-------GAMYB  ------->GAMYB     <----------DOF2  --------->ATHB12             ----- <---------YAB1 <-----------RAV1(1)           <-----------GT1     <---------YAB1       ----------->GT1 --MYB52(1)  <-----------GT1   <------------AtMYB77              <---------GLK1(2) <-----------GT1 <-   ttgattatttccttttttctgttgttaatcttaactgtcaatggattgtttccttttttcttagttagattattgaaccgggatttaaccagtaaaatag  14779500                  ------>NtERF2                  --------->LBD16                <---------LBD16                                                               <------              <---------ARR14(2)                    --------->ANAC58                          -------              --------->ARR14(2)                    --------->ANAC58                          <------           <------MYB46(1)                   --------->ANAC46              <---------DAG2    --------           <------MYB83                     <---------LBD16          <<<<<<<<<TBF1           --------          --------->MYB59  ----------->RAV1(1)--------->LBD16 --------->ARR14(2)       ----------->GT1      <---------MYB46(3) <---------ZAT18   -------->P    ----------->GT1   <----------DOF2  <--------   --------->MYB52(2)    --------->ZAT18   --------->MYB52(1) <---------ARR14(2)   <------------CBF ------->MYB.PH3(2)   <------------CBF    --------->MYB52(1)  <---------ARR11(3)------------>CBF    *TSS --------MYB46(3)<---------RAP2.6(2)    <---------MYB52(2)    --------->ARR11(3)----------------->AG<   tttgttagtggttcggtttccggctattgcaccagaatacaaactaaccggaacaagcagagtaaatcttcttcttcctttttccaattgagttattata  14779600 ---------->ID1 ---AHL20(2)                        <---------DOF5.7(2)                               <---------CCA1(2) -->AHL20(1)                      --------->DOF5.7(2)                             <-----------HVH21 ---AHL20(1)                      <---------MYB52(1)                             ----------->GT1 ->AHL20(2)                      <-------GAMYB                            --------->At4g35610 ->YAB1                     --------->ZAT2                       <---------YAB1  --------->bZIP60(1) -YAB1    <---------GLK1(2)--------->ANAC58                    --------->YAB1    <---------bZIP60(1) -----------GT1            --------->ANAC58          --------->ALFIN1     <---------At4g35610      <-   tttttcgcttcggcttctctctctctcacaagctccgttatcggaatcaaacacagtgggaagaatcaaaattgacagatgtgatgtcaaatctcttcaa  14779700                                                                                          <----------DOF2                                                                                         <---------ANAC58                                                                                         <---------ANAC58   <---------ANAC58                                                                  <----------DOF2   <---------ANAC58                       --------->ATHB12     <----------DOF2  <---------ALFIN1  --- --------ANAC55(2)   --------->ATHB12    --------->ICU4    --------->YAB1 --------->GLK1(2)       <--   aacgtgagtgtctctgtttaagtcgattggactgtgttttgtattgattcgagcatttgaatcatctttctcagaaaatccaacactctttgctttagtt  14779800             <-------GAMYB            <---------ANAC58                                                       <----------DOF2            <---------ANAC58               <---------ANAC46                    <-----------------AGL1            <---------ANAC46    <---------ARR14(2)                             <-----------------AG ------>ANAC55(2)               --------->GLK1(2)                   <---------ARR14(2) -------ANAC55(2)               --------->ARR14(2)--------->AHL20(2)--------->ARR14(2)   atgtgattcccttggcgttgtcttatagtttgcgattctgtagttgagttgaataaatagtttgcacccgaatttgttttctccgatttagggatttgat  14779900                                           <---------MYB46(3)                                       <---------MYB46(3)                                  <---------HSFB2a(2)                                <---------ZAT6                                             --------->HSFB2a(2)                       <----------ID1<-------GAMYB                      ---------->DOF2<---------SPL7                     ---------->DOF2--------->MYB52(2)              --------->YAB1   --------------->AtSPL3   tttgaaattgcagaagaaaattttaaagacaagagtgttagttgttggatagtgagagaatgtttacaaataatcaaagacaagaagaacgtactggaaa  14780000                                                                --------->GLK1(2)                                                               <---------GLK1(2)                                                            --------->YAB1                    <---------ARR14(3)                  <---------YAB1                    <---------ARR11(3)                 --------->AHL20(2)                    --------->ARR11(3)               <---------RVE1(1)                    --------->ARR14(3)              --------->ARR11(3)                    <---------ARR14(2)              <---------ARR11(3)                             <-                    --------->ARR14(2)            <---------TOE2(3)                           -------   acatggaacaccaaggcttcaatatcttcaggtctcttcaatgtctgtttttgagatttttataagaatctaagaagcattgttggaattgagtttgtct  14780100  Previous    Next  AGI:  At5g37280.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G37200.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 14778505    to: 14779155    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g37290.1    Description:  armadillo/beta-catenin repeat family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO22199.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 14779600    to: 14781574    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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