Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------PCF5                        ----------->GT1      --------->WRKY38(1)                        --------->LBD16      --------->WRKY12             ----------->GT1                 <---------ZAT14      --------------->AGL15           <---------ARR14(2)      <----------DOF2  <---------ANAC46      <---------ZAT18                     <---------ZAT14      <---------------AGL15           --------->ARR14(2)                   --------->TOE1(1)     <-----------------AGL3     <-----------GT1  <---------ALFIN1         --------->HSFB2a(2)     <-----------------AG<---------MYB52(1)  --------->ZAT14              <---------LBD16     <-----------------AGL2  <---------YAB1 --------->ALFIN1              <---------HSFB2a(2)     ---   <-----------GT1    <---------LBD16<---------CCA1(2)               <----------DOF2  <---------MYB46(3)   ccaattttctttttttggttaaattccggttattaaaccatatccagtggaccactggtttttatgttttccttttctcggactacattggtttcaaaag  14752000                                                                           --------->AHL20(2)                                                                       --------->ICU4                                                                     --------->YAB1                                                                --------->AHL20(2)                                    <---------ANAC55(2)        <---------AHL20(2)                                    --------->ANAC55(2)       --------->AHL20(2)                                  --------->CCA1(2)           <---------AHL20(2)   <---------SPL7                --------->ARR11(3)       <---------AHL20(2)<---------AHL20(2) --------->ALFIN1     --------->MYB46(3)                 <---------MYB52(1)<---------AHL20(2) ------>GLK1(2) <---------ZAT6   <---------ARR11(3)  <---------ZAT14--------->AHL20(2)             --   aatgtggaacggttttgagagttaaccaatacagagatatgtaatgttccctgacttcagttaatttaaaataaaaattaaatgaaaaacttgaacgcgt  14752100                                             <---------ANAC58                                             <---------ANAC58       --------->ZAT6                                            <---------MYB46(3)  <---------WOX13(1)                                        --------->ATHB12 <---------AHL20(2)                                        --------->MYB52(2) <------------CBF                        --------->TOE1(3) <---------WOX13(1)  --------->ATHB12                        --------->TOE2(3)<------------CBF<---------YAB1                   ------------>CBF  --------->TOE2(3)------>ZmHOX2a(1)             <-----------GT1            <-----------GT1          <-------GAMYB    <----------DOF2 --------->ANAC46 <----------DOF2      --------->TOE2(3) --------->YAB1<---------MYB52(1)<-----------TBP     <-------TEIL --------->GT1  <----------DOF2     ----------->GT1---------->ID1 <-----------GT1  <-----------GT1   tttgttaatctaaatttccttttcaatcttaaactcgagcgttaattggttgtgtcctttttattgatttacactaaattcatattttccttttttaaaa  14752200                    <----------DOF2                                                  <---------CCA1(2)                  ----------------->AGL1                                   --------->TOE2(3)      <--                <-----------GT1      <----------DOF2                      --------->ANAC58      <----               <-----------GT1    --------->ARR11(3)                      --------->ANAC58      -----         ----------->GT1       --------->MYB46(3)                       --------->MYB52(1)     <-----     ------>MYB46(1)<---------DAG2<---------ARR11(3)                <------NtERF2   ------>MYB83-----     ------>MYB83<-----------------AGL1                   <-----------GT1 ----------->GT1    --------   <---------MYB59----------------->AG            <----------DOF2--------->ATERF1(1)------>MYB46(1)   ttcgaccaaattagttatttccctttttcgtcaacaaatcttttatgttttcctttttttttactgagtcggccaaacgtaaaacctatctctctatata  14752300    ------>ZmHOX2a(2)  <---------ARR11(3)          <---------CCA1(2)  --------->ARR11(3)      --------->TOE2(3) ----------CBF            --------->YAB1 -----AHL20(1)           <<<<<<<<<ARR2                           <<<<<<<<<TBF1 ---->AHL20(1)           <<<<<<<<<ARR1                   <---------CCA1(2) ----AHL20(2)        ------------>CBF             <---------TOE1(3) ---->ARR11(3)      <-----------GT1        ---------->DOF2------->TEIL                <-------TEIL --->TBP    <----------DOF2 <---------CCA1(2)     <---------TOE2(3)    ------>ZmHOX2a(1)       ------   tattgatctcttctctttgatttcacaatcttatctcttcatatcaaaagttagggtttgaatcttcttcttcctcttccaccatggatacatatagtaa  14752400                                    ------>MYB46(1)                                    ------>MYB83                                    -------->P                                   =================HOX2a_HOX2a                                   ------>ZmHOX2a(1)                                 ------>ZmHOX2a(2)                                                  <                               <---------ARR11(3)                                         <---------WRKY45                               --------->ARR11(3)                                         <---------WRKY38(1)                              --------->YAB1                                              <---------WRKY12                             --------->ICU4                                              --------->WRKY18(1)                     ----------->RAV1(1)    <---------ARR11(3)                        --------->ALFIN1       --------->LBD16       <---------ATHB12<------ZmHOX2a(2)                   --------->ANAC46   -      <---------ANAC46  ------->GAMYB       --------->ARR11(3)           --------->WOX13(1)      <<<< --->ATHB12         --------->REM1(1) --------->AtMYB61     <---------ALFIN1  <---------REM1(2)  <<<<   ttgggagtccgtagagattactacaacagcaatgatcctaccacaagatcaagggtttagaaacaccgtgttcgtcaatctacacgatgtggtcaacgag  14752500                                                 <---------ALFIN1                                               ------>NtERF2                                              <---------TCP16(1)                                              --------->ARR14(2)                                              <---------ARR14(2)                                             --------->At4g35610                                             <------NtERF2                                            <---------ATERF1(1)                                           <---------RAP2.6(2)                                          <---------LBD16                                         --------->MYB52(2)                                        <-------TEIL                                            -----                    ----------->GT1   <---------SPL7 <---------ICU4                             <----                    <---------ANAC46  --------->KAN4(2)                                        ------                    <---------ANAC58 --------->KAN4(1)                                    <---------ZAT18        <------ZmHOX2a(2)            <---------HSFB2a(1)                                  <---------ZAT14       <---------ARR11(3)            <---------KAN4(1)                                    --------->ZAT14       --------->ARR11(3)            --------->HSFC1(2)                                 <---------At4g35610 ---------At4g35610 <---------ANAC58 <---------HSFC1(2)<---------YAB1                   --------->At4g35610 -------->At4g35610<------NtERF2     --------->HSFB2a(1)                       --------->YAB1-------- <<<<<AtCCA1     --------->ALFIN1   <---------KAN4(2)--------->YAB1            <---------ICU4-------- <<<<<AtLHY --------->MYB52(1)<---------ANAC46<---------TCP20              --------->MYB46(3)--------   ttagctgaagatcaaaacggtgtcgtaatatgtctgggaacgttcgcggctccacttatgactaaaatcgaattgaaaccatcatgcctcagttcacacc  14752600                                                                                                    <                                                                                              <------         --------->ARR14(3)                                                                  --------     --------->YAB1                                             ------>ZmHOX2a(2)          ------>MYB46(1)  --------->WOX13(1)                                          --------->ARR11(3)           -------->P ---->AtMYB61                                                 <---------ARR14(2)           ------>MYB83 -----ALFIN1         <-------TEIL                             --------->ARR14(2)          <---------ALFIN1 --->ANAC46  ----------->HVH21                                <---------ARR11(3)         <---------ALFIN1 ->ANAC58--------->ARR11(3)                                  <------ZmHOX2a(1)    <----------TaMYB80< ->ANAC46<---------ARR14(3)                              ---------->DOF2     <---------At4g35610    < ->ANAC58<---------ARR11(3)                     <---------MYB46(3)           <---------ZAT18 <-------   acatctatcaagaccttgacaagttcatcacacatactgagttttgtcgattgttgagcgaaaggatcgttttggattgtgctcatattccccaaccttt  14752700            <---------ANAC46            <---------ANAC55(1)            <---------ANAC58            <---------ANAC58                                      --------->CCA1(2)       <----------DOF2                                           --------->ARR11(3)        <---------MYB52(2)    ---------->ID1                                               <---------ARR11(3)        --------->MYB46(3) ---------ANAC46                       <---------DOF5.7(2) --------->ETT(2)             <------ZmHOX2a(1) ----DOF2   <---------ANAC55(2)        <---------At5g28300 <---------ETT(2)          <--------------- ->TOE2(3)  --------->ANAC55(2)       <-----------GT1   <------MYB83              <---------ANAC46 ---------ANAC58                   <---------YAB1       <------MYB46(1)           <---------ANAC58 ---------ANAC58             <---------ARR11(3)        --------->MYB59            <---------ANAC58 --DAG2------>ZmHOX2a(1)     --------->ARR11(3) <-----------RAV1(1)          --------->ATHB12   tagcgtgtccttttacgtgagagtgacaagagatgttatgttaccgtctattgttgttcggtcgagagatatgtttcaaagattgcttgaggaacaaaca  14752800                                                                                  <---------YAB1                                                                           --------->YAB1      ------                                                                          <---------YAB1     <-------                         >>>>>>>>>TBF1                                  <---------ICU4       <-------                  --------->At4g35610                                  --------->ICU4        <-------        <---------------AGL15                            <----------DOF2--------->YAB1   <-------GAMYB      <-----------------AG                            <------ZmHOX2a(1)<---------YAB1    <---------At4g35610 ------WRI1       <---------At4g35610          <---------AtLEC2      --------->YAB1     <-----------RAV1(1)   atggaattgactaatttgggagatgaagaagaaaccacttgttcgatttgtatggaggacttttcagagagtcatgatgataacatcattctgttgcctg  14752900  Previous    Next  AGI:  At5g37230.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G37270.1); similar to hypothetical protein OsI_036181 [Oryza sativa (indica cultivar-group)] (GB:EAY82222.1); similar to Os12g0140600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001066123.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 14752384    to: 14753010    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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