Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 <---             --------->ATHB12                                                                    <---      --------->ANAC46                           -------->P                                     <----      --------->ANAC58                           ------>MYB46(1)                                -----      --------->ANAC58            --------->At4g35610    ----------->HVH21           <---------ANAC58    <---------ALFIN1              <---------At4g35610  ------>ZmHOX2a(1)             <---------ANAC58   ------>ZmHOX2a(2)           <---------At4g35610<-----------------AGL1------>MYB46(1)     <--------   --------->MYB46(3)   --------->MYB52(1)       ------>MYB83           ------>MYB83 <---------AtLEC2 ------DOF2 <---------ATHB12  <-----------HVH21 <---------ALFIN1     --------->MYB46(3)     <------NtERF2   tttgatccaccccagtcattagaaactgactgcatcagctccttgaatccctacctcctctggcaggctgaaccaactcatgcactggcatggcagaggc  14658300          ------>MYB46(1)          ------>MYB83        <---------MYB46(2)        <---------MYB59    <---------MYB52(1)    --------->DOF5.7(2)   <-------GAMYB -------->LBD16 ----->NtERF2 ------->DEAR3(1) --------ALFIN1                                                   <---------ZAT18 ------>RAP2.3(1)                                          --------->TGA1a ------>ATERF1(1)                                          --------->REM1(1)             --------->At4g35610 ----NtERF2  --------->MYB52(1)                <---------YAB1     --------->ZAT14        ----------->RAV1(2) ------ATERF1(1)                           ----------->RAV1(1)    <---------ZAT14       --------->GLK1(2) ------RAP2.3(1)                        --------->AtLEC2   --------->O2              --------->ANAC58 -----ARR14(2)                   --------->DEAR3(1)      ----------->RAV1(1)         --------->ANAC58 ---->ARR14(2)          <---------GLK1(2)--------->MYB46(3)--------->bZIP60(2)  <---------ZAT6 -At4g35610 --------->MYB46(3) <---------At5g28300    --------->ANAC46        --------->MYB52(2)   tccgccgttaccaaacaactgttttggaatcttcaccgtgccatccaacatcatagaggccacatcagtgctcacattggtagtggcaagcatctggaga  14658400                                    --------->ZAT18                                    <---------ZAT18                                    --------->ZAT14                                 --------->ALFIN1                          -------->HAHB4                         <---------YAB1                      ------>ZmHOX2a(1)                      --------------->AGL15         --------->ANAC58                      <---------------AGL15   <---------ATERF1(1)                     <-----------------AGL3 ----------->RAV1(2)                     ----------------->AGL3 <---------ANAC58                     <---------MYB59<---------ZAT14 --------->ANAC58           <-----------HVH21   <---------ANAC46 --------->ANAC46               <---------At4g35610           <-----------TGA1    <---------ANAC58 --------->ANAC58               --------->At4g35610          --------->ANAC46--------->YAB1    <---------ANAC58          <-----------ARR10          --------->bZIP60(2)  <---------ANAC58 --------->ANAC58  --------->YAB1   aacactttcaactcgtcactgttcctaataatagggtgtgcacatagcctgcgcaagtatttctacaatgctaatcttctctgctccaaaaaactcttgt  14658500                                       --------->ATERF1(2)                                       <---------ATERF1(2)                                     <---------ARR14(2)                                 <------ZmHOX2a(1)                              <-----------RAV1(2)                            ----------->RAV1(1)                         --------->ANAC58                         --------->ANAC55(1)                                ------->TEIL                         <---------ANAC55(2)                >>>>>>>ZML2   <-------TEIL                         --------->ANAC46                   --------->HSFC1(1)                 --------->CCA1(2)   --------->ARR14(2)     <---------HSFB2a(2)                 --------->At4g35610<------ZmHOX2a(1)       <---------HSFC1(1)              <-------- <-----------HVH21       --------->ANAC58 <---------ALFIN1  --------->HSFB2a(2)           --------->YAB1   ttctgtcaaccctgaagagagatgaagacgcaacaggaggaccggcactggttcttagggttctagagagtttagatgcatctagcgaagaatcatcttt  14658600                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                            --------->ANAC46                           <-------TEIL                                     --------->ANAC58                           ---------->DOF2                             <---------ARR14(2)                          --------->CCA1(2)                            --------->ARR14(2)                         --------->ARR14(2)                          --------->ANAC46                     <---------ZAT14                                <---------HSFB2a(2)                     --------->ZAT14                                --------->HSFB2a(2)    >>>>>>>>>>                <---------ZAT14                                    <---------LBD16 ----------->RAV1(1)                --------->ZAT18                              <-----------ARR10---------->DOF2   <----                --------->ZAT14                         ------->GAMYB--------->LBD16 --------->MYB46(3)            --------->ALFIN1  <---------At4g35610    ----------->RAV1(1)    --------->ANAC58--------- -YAB1 --------->GLK1(1) <---------ARR14(2)         <------NtERF2 --------->MYB52(1) <---------MYB52(2)   gaaacacagaaatcgtggagcactgcagatacagcacataaaaacagccatggcgcaacagagagtcttaccggaaacactcaagcaacaaatgtccaat  14658700                 <-----------GT1              --------->YAB1              <---------ICU4           --------->TOE2(3)     <----------DOF2                                                                                <    ------>ZmHOX2a(2)                                                                            <---  --------->ARR11(3)                       <-----------ARR10                                    <----  <---------ARR11(3)                   <-------TEIL                                          <------- >>>>>>>LFY--------->YAB1           <---------At4g35610                                     <-------- -----ATHB12 <---------YAB1         --------->At4g35610                           <------ZmHOX2a(1)-- --->CBF   --------->TOE1(3) ---------->DOF2          --------->YAB1         <------ZmHOX2a(1) ------   gtttgatctttaaccataataacatttcagagaaagatagctgcatttcttagctatcttcattttaaacacaaattcaggacaggaacatggagattga  14658800    <---------TOE2(3)   --------->YAB1 <---------WOX13(1) ------------CBF ------WOX13(1)                                                                                    <- --------CBF                                                 ------>ZmHOX2a(1)                     -- --WOX13(1)                                       <---------ALFIN1                      <---------YAB1 ----CBF<---------YAB1                          <-----------GT1   ----------->RAV1(1)  --------->ARR14(2) ------->ATHB12                     <-----------GT1     <----------DOF2     ----------->HVH21      -- --->ATHB12       <-------TEIL  --------->AHL20(1)--------->ZAT6 <----------ID1        <---------ARR14(2)   ttgattgatgatgtttcaaatacattttgaaaaatatgttacatttgttttcacactcctttcctatgcaacaaatttctgacaacgagtatccttgtga  14658900                                                                    --------->MYB52(1)                                                                  <---------MYB52(2)                                                 <-----------GT1------->GAMYB               <----------ID1                 --------->YAB1    --------->TOE2(3) --------AHL20(1)                           <------------CBF   --------->MYB46(3) ------->AHL20(1)              ----------->RAV1(1)  --------->TOE1(2)               <----------ID1 ------->ARR11(3)       --------->TOE2(3)------------>CBF    <-----------GT1   --------->YAB1       <   atattttgacaacgaatagaacaaaacctcatcccacataaacaacaattgtaacctgcaatgtaaccacaaaccgagcaaaaatagcgacgagaagacg  14659000              --------->At4g35610     --------->ANAC46              <---------At4g35610    --------->TOE1(2)             <-----------RAV1(1)<------MYB83 --------->At5g28300            <------------AtMYB77<------MYB46(1)                                        <---------MYB59            --------->MYB46(3)  <---------DEAR3(2)                      --------->MYB52(1)           <---------At4g35610 --------->MYB59            --------->ARR14(2) --------->GLK1(2)     --------->GLK1(1)  --------->ANAC58    ----------->GT1            --------->TOE1(2) ------>MYB46(1)    <---------TOE1(2)   --------->ANAC58----------->HVH21 <---------ARR14(2)<---------GLK1(2) ---------LBD16    <----------DOF2 <-------TEIL---------->DOF2        <---------MYB52(2) ------>MYB83   aactcggaggtccaactgctgctttcaagtaagtcggtacatgcgacggtaaagactccaaatttgcctaaaacaaacgattcttagaaccaaacttcta  14659100                        --------->MYB111(1)                        --------->MYB111(2)                        --------->MYB46(2)                        --------->MYB59                        --------->MYB52(2)                      <---------MYB52(1)                           <------ZmHOX2a(1)             --------->LBD16                                <------ZmHOX2a(1)                 <------            --------->ANAC46                          --------->ANAC58              ---------->DOF2            --------->RAP2.6(2)    <-----------GT1    --------->ANAC58 <---------DAG2         <------ --------->TOE2(3)   ------------>MYB.PH3(2)     --------->At4g35610   <----------DOF2   <----------DOF2   atgccttagcctagccgcaaaatagttagttagtaagttacctcttgcaatagctcaaggaaggatttaggagctttacgagcttctaaagctttcgctt  14659200  Previous    Next  AGI:  At5g37050.1    Description:  similar to phox (PX) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G58440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21370.1); contains domain SORTING NEXIN (PTHR10555); contains domain gb def: Emb|CAB87268.1 (PTHR10555:SF2) Range:  from: 14657740    to: 14658651    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g37055.1    Description:  ATSWC6. similar to zinc finger protein [Nicotiana benthamiana] (GB:AAW83129.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23542.1); contains InterPro domain Zinc finger, HIT-type (InterPro:IPR007529) Range:  from: 14658781    to: 14659670    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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