Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->ANAC58                   <-----------RAV1(1)                   <---------MYB46(3)                        --------->ZAT2      ------>ZmHOX2a(2)    <---------AtLEC2                  <---------ZAT2                      <---    --------->ARR11(3) --------->At4g35610                  ------>MYB83             <---------At4g35610    <---------ARR11(3) <---------At4g35610 --------------------->WRI1                --------->At4g35610 --->DOF2       --------->GLK1(2)  --------->ANAC58         ------>MYB46(1)          ----------->RAV1(2)   gacgatgatctaggtgagcatctgttgctgcatgggcaagcgtttctatggaagtttagaccaagctggtttagaacaacgttgttcacctgcaagtttc  14656000                                              <------ZmHOX2a(2)                                             --------->ARR11(3)                                     ----------->HVH21                                    ------>ZmHOX2a(2)                                   <---------At4g35610                                   <------ZmHOX2a(2)                                   --------->CCA1(2)                                  --------->ARR14(2)                                  --------->ARR11(3)                                         <-------                                  <---------ARR14(2)               <---------YAB1            <-------                                  --------->AGP1          <---------YAB1                     <-------           <-----------HVH21      <---------AGP1   <---------ARR11(3)         ------------>CBF     --------->YAB1               <---------ARR11(3)   --------->ICU4<------------CBF----------->HVH21 -------DOF2              <-------TEIL      --------->GLK1(1)<---------YAB1 --------->WOX13(1)   tttggaataacaatgtcaaatggtttgatacatatagatctgacagagatcaaggtcattgttatagttgtaattggtctatcaatgctgacagtgcttg  14656100        --------->HSFC1(2)        <---------HSFC1(2)     <------ZmHOX2a(1)       <------MYB83                           --------->YAB1    --------->ANAC46         <------MYB46(1)                        <---------ICU4  <---------LBD16       <---------YAB1                        ----------->GT1                  ------ --ANAC58          <---------AHL20(2)                   ------------>CBF                    --------- --ANAC46          --------->AHL20(2)              ------------>CBF--------->ICU4     --------->AHL20(2) --ANAC58          <---------AHL20(1)         --------->AHL20(2) --------->YAB1   ----------->GT1   -   tatttcaggaaacttcaacaaaaaatttgataggtgttatccatggaattaaaaacaattcaatttgtaataatgtctagtattttgttaaaatataaaa  14656200                                                 --------->ZAT6                                               <-----------GT1                                            <---------ICU4                                           --------->ICU4                                         <--------ATHB1                                         --------->ATHB51                                         <---------ICU4                                         <---------AHL20(1)                                         --------->YAB1                                         --------->AHL20(2)                                ----------                                        <---------ATHB51                              <----------DOF2                                        --------->ICU4                                <--------------                                        <---------ATHB12              <-----------GT1 ===============      <---------YAB1                ------------>CBF              <------------------------ANAC81 ---->DOF2    ------------>CBF  --------->ARR14(2)              <---------AHL20(2)   --------->TOE2(3) -->TBP      <-----------GT1    ---------->TaMYB80        <---------WOX13(1)     <---------ANAC58   - --------->DOF2                 <---------ARR14(2)       <------------CBF        <---------ANAC58   -   agaaaagtatcattttctcaattcatatttgtcgaatatgcaataatttttactctatagattgattttttttttcttcccttgcttcctttacaaagaa  14656300                                                                                                    -                                                                                         <---------HSFB2a(2)                                                                                         --------->HSFB2a(2)                                                                                        ------>ZmHOX2a(2)                                                                                      <---------ARR11(3)                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)                                                                                      --------->AGP1<                ----------->TBP                 ---------->DOF2          --------->DAG2<------ZmHOX2a(2)           <-----------GT1                 <----------DOF2         <------NtERF2      <---------AGP1<           --------->ZAT6                  <---------------AGL15  ------>NtERF2       --------->ARR11(3) >DOF2<---------ICU4   --------->AHL20(2) --------->TOE2(3)   <-----------RAV1(1)   ----------->ARR10 -AGL15  <-----------GT1              <---------ANAC58      --------->MYB52(1)    <---------MYB52(1)< ==========================================================MADS_MADS    ---------->DOF2--------->CCA1(2) -------->TOE2(3) <---------AHL20(2)  <---------ANAC58   --------->TOE2(3) --------->HSFC1(2)       - -------->TOE1(3) ----------->TBP <------------CBF       --------->TOE1(3) <---------HSFC1(2)     ---   aaccctaatatttacactatataaaaaaaattcttacattgcttcctttacaaagaaaaccctaatggtgccgaaaaagcttccattagatctggaagaa  14656400                                              <---------MYB52(1)                                           ------>ZmHOX2a(2)                                           <-------TEIL                      --------->CCA1(2)                                         --------->ARR14(2)             --------->LBD16      <----------DOF2                    <---------ARR14(2)            --------->HSFB2a(2) -------->ARR11(3)                       --------->AGP1                <---------HSFB2a(2) ---------GLK1(2)                      ----------->ARR10           <----------DOF2 ---------ARR14(2)                  <----------DOF2           --------->ANAC58 ---------ARR11(3)                 <---------ANAC58           --------->ANAC58 -------->ARR14(2)       ------>ZmHOX2a(2)<------ZmHOX2a(2)   <---------HSFB2a(1)                  <- -------->ARR10 <---------ALFIN1   <---------ANAC58           --------->HSFB2a(1)     --------->WOX13(1)   gagatactctttcgagttccacctcgatctctccattgctttagatccgtttgcaaagaatggaacgctctttccagagataagagattaatcaacaaaa  14656500                --------->LBD16               <---------HSFB2a(2)             ------>ZmHOX2a(1)          <---------ATERF1(1)        <---------At4g35610         <-------MYC2                                                 ----       <---------ANAC58             ------->MYC3                                               <-----       <---------ANAC58             <-------MYC3                                               <-----   <---------ANAC58                --------->ANAC58                       --------->YAB1       <-----   <---------ANAC46         ---------->DOF2    <---------AHL20(2)      --------->YAB1         <------   <---------ANAC58--------->GLK1(1)------->MYC2                 --------->TOE2(3)     <---------YAB1 ---------DOF2 --------->HSFB2a(2) --------->ANAC58           --------->WOX13(1)     --------->YAB1 <   actttgcttgcgctcctccagaattcatcttaaagacacgttccaatatttattcgataagcgtcaatctcaacgatgacaatccaactataaatgtgcg  14656600                                                                                                   <-                                                                                                  <--                                                                                               <-----                            <---------WRKY12                                                   <-----         <---------AtMYB61  <---------WRKY38(1)         --------->At5g28300                  <-------    <---------YAB1         --------->WRKY18(1)         --------->YAB1                       <------NtERF2 ------->HVH21            <--------ZAP1                ----------->GT1                      --------- ----ANAC58          <---------At5g28300        --------->TOE1(2)                         --------->ALFIN1 ----AtLEC2    <---------YAB1                  --------->At4g35610                        <---------DEAR3(1) ----ANAC58    --------->ICU4                  <---------At4g35610                  --------->ANAC46 -TEIL <----------DOF2<---------ANAC46         <---------ZAT2                  <----------DOF2<------ ---------ANAC46     <---------LBD16         <---------PCF2              --------->YAB1  <------ZmHOX2a(1)   tgacttatgctttggtgatcatttacggggtcaacattctctctatgggacctgcgatggtaacttcttcttgtatgatcactttcacgaaggaggcgga  14656700                                                                                    --------->ANAC58                                                                         <------MYB46(1)                                                                         <------MYB83                                                                        <---------TOE2(2) --------AtLEC2                                                      <---------ANAC58 -----TEIL                                                           <---------ANAC58 -NtERF2                                                             <---------ANAC55(1) --GAMYB                    <---------ANAC58                         --------->ANAC55(2)            < --ANAC46                   <---------ANAC58     <-----------RAV1(1) <---------ANAC55(2)   ---------- >ATERF1(1)           <---------AHL20(2)  --------->LBD16            <---------ANAC46  ---------->DOF2 ---MYB46(3)         --------->AHL20(2) <------NtERF2          <---------TOE2(2)    --------->ANAC58<   tgcatggttttgtttgagacagattaaatggtttgccaaggctccgaaaatatgtggcaagggcataggttacgtaggtagtagacccgaaaagagttac  14656800              ------->MYC2              <-------MYC2                    <---------HSFB2a(2)              ------->MYC3              ------>ZmHOX2a(2)              <-------MYC3             <------ZmHOX2a(2)                                       <-----             <---------ANAC58         --------->ARR14(2)                 --------->ANAC46   ---------  --------->ATHB12                    <---------ARR14(2)                 --------->ANAC58   --------- <---------YAB1     ===========================HOX2a_HOX2a               --------->ANAC58 <---------ANAC58 ---------GLK1(2)   ------>ZmHOX2a(1)--------->GLK1(1)       <---------------------WRI1   <---------ANAC58 ->GT1       <---------ANAC58        <---------GLK1(1)    <---------KAN4(1)           --------->CCA1(2) ---------ARR11(3)  ==========================HOX2a_HOX2a --------->KAN4(1)        <---------TOE2(3)   aagattattgagagaacgtgtcctctcggtttacaagggagatcggttctcggtgttagaacaatccaaaaaaacaaggaagattgagatttgggtgacg  14656900  Previous    Next  AGI:  At5g37040.1    Description:  F-box family protein. Identical to Putative F-box protein At5g37040 [Arabidopsis Thaliana] (GB:Q9FHW4); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G58090.1); similar to unknown [Arabidopsis lyrata] (GB:AAL65603.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 14656365    to: 14657164    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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