Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------MYB52(2)                   <----------DOF2                --------->ARR11(3)                <---------ARR11(3)                                      ---------->DOF2        ----------->HVH21   --------->ZAT6                          --------->ANAC58 <-----------GT1<---------ARR11(1)       <----------DOF2            --------->ANAC58              --- -------DOF2   <---------CCA1(2) -------->P                       ---------->DOF2                 <--   ttttctctctctgacacatatctttttctctcactaaccatttctttctctctctctcttctgtttttgaaagccaaagtgtctctcttggacagtgatg  14646900                             --------->ANAC46                             --------->O2                             --------->TGA1a                             <---------O2                             <---------TGA1a                             =================================================bZIP_DOF                          --------->TOE1(2)               --------->AHL20(2)                                        <---------ANAC58               <---------AHL20(2)                                        <---------ANAC58              --------->AHL20(2)                                      <------------------------ANAC81    ===================================bZIP_DOF            --------->ARR11(3)    <----------DOF2    <-----------GT1                     <---------ARR11(3) ------>ARR14(2)   --------->AHL20(2)               >>>>>>>>>TBF1  <----------DOF2 -------ARR14(2)   <---------AHL20(2)       <---------MYB46(3)  ---------->ID1   <----------DOF2   --   gaactgcttcaagagatttaattttttacccacgagagaagtcaagttgttgaagaagaaagatttgttcttttgtcttgtttctttcattttttcatcc  14647000                                                  <---------ANAC58                                          <---------ANAC58                                          <---------ANAC58        ---------->DOF2                   <---------ANAC46     ------>ZmHOX2a(2)                 <--------P <---------ANAC55(2)    <------ZmHOX2a(2)                 <-------GAMYB                        <---------MYB46(3)   --------->ARR11(3)            <---------MYB52(1)                 <---------ANAC58   <---------ARR11(3)           <-------GAMYB     --------->ANAC55(2)   <-----------RAV1(1)    <-----   <---------AGP1              <-----------RAV1(1)<---------ANAC58  <---------ANAC58        <-------- -------->DOF2              <-----------GT1<----------DOF2        --------->ARR11(3)        ---------   acaaagatctcaaagacaagagtttttttttttctgttggggttgcttcaatgcgtacttgtagtagagagcttgtgttgttgttcatggtttgatgatg  14647100                                                          <----------DOF2                                                     <---------TOE1(3)                        --------->CCA1(2)      <---------ANAC46    <------MYB83      <----------DOF2<        <---------ARR14(2)                 <---------ANAC58        ----------->GT1 --------->HSFC1(2) ----YAB1--------->GLK1(2)                 <---------ANAC58        <------MYB46(1) <---------HSFC1(2) -YAB1  <---------GLK1(2)                  <---------ANAC46   <---------TOE2(3)    --------->HSFB2a(1) >ICU4  --------->ARR14(2)       <---------MYB46(3)  <---------TOE2(3)    <---------YAB1            <   agaagaaacagattctggttttgaagaaatggggtttgttctgtttcttgtgtttaagggttttatggatggttttttgattcgaagctttcactgagtc  14647200                                                                       ---------->DOF2                                                                    <---------At4g35610              <---------ARR11(3)                                    --------->At4g35610        <-----      <---------YAB1 <---------------------WRI1                  --------->LBD16              -------    <---------MYB46(3)                                          <---------HSFB2a(2)           ------- ---------YAB1--------->ARR11(3)---------->DOF2           *TSS  --------->HSFB2a(2)     --------->ZAT14 ---------TOE2(3)   <---------LBD16          ---------->DOF2   <---------LBD16          <---------ZAT14   ttatggttgtgagtgagatttttgggggtttgaacaaaggagatggagaaagacgagtttgtacttccggagctaaagagttatagctactgtagtagct  14647300                          <<<<<<<<<SPL4                          <<<<<<<<<SPL5                          <<<<<<<<<SPL1                         <---------SPL7                       <---------------AtSPL3                       <---------------AtSPL8                <---------AHL20(2)     <---------TOE2(3)               <---------AHL20(2)      <---------TOE1(3)                                         <---           <---------RVE1(1) ----------->GT1               <---------ANAC58                --------->ARR11(3)          <---------GLK1(2)<---------LBD16                 <---------ANAC58                <---------ARR11(3)          --------->ARR11(3)--------->ANAC58               <---------ANAC46            <---------ETT(2) ----ANAC46<---------CCA1(1)--------->ANAC58          <------MYB46(1)             <---------At4g35610 -->ZAT2  <---------ARR11(3)--------->ANAC46          <------MYB83                --------->At4g35610 -->At4g35610  --------->AHL20(2)--------->ICU4      --------->MYB59             ------->TEIL    ----   ggaagtgaagaagattttttaatagattgtacggaaaaattagggttttcaaagtttggtttcttgaagttgaattagacatgaagctgtcaacatctgg  14647400           <-----------HVH21    <---------WRKY12    <---------WRKY38(1)       <-----------GT1                                                <-------   --------->WRKY18(1)  <---------ANAC46                  <---------HSFB2a(2)  <---------ANAC58 ------ARR14(2)         <---------ANAC58                  --------->HSFB2a(2)  <---------ANAC58 ----->ARR14(2)         <---------ANAC58           <-----------------AGL2    --------->ARR11(3)   attgggtcaacagggtcatgaaggtgacttgtttactctctgattttcttagttctgtttctggacaagtgttttcttagttcttgtgtctgtgtttgtt  14647500                                         <-----------RAV1(1)                   <---------GLK1(1) <---------ANAC58                                     <----------DOF2        <---------ZAT14          <---------ANAC58                         <--------P   <-----------GT1    <------ZmHOX2a(1)            <---------ANAC58  <---------MYB52(1)    <---------MYB52(1) --MYB46(3)        --------->GLK1(1) <---------ANAC58            <XXXXXXXXXXXXXXXXXXXXXXXMIR829.1   <   ctaacaggagagaagtgtctgaattctgagctatggcatgcttgtgctggaccattagtctctcttccatcatctggtagtcgagttgtttactttccac  14647600                      --------->MYB111(2)                      --------->MYB55(2)                                                       ------                      <---------MYB46(3)                                                     --------                     <--------P                                                              <-------               --------->ALFIN1                                                              --------        <---------ZAT14        ---------->DOF2                                    --------->AHL20(2)        --------->ZAT14<-------GAMYB           <---------YAB1   <---------YAB1    <---------AHL20(2)< -----------HVH21   <-------GAMYB          <----------DOF2 <---------ZAT6 --------->GLK1(1)  <-------   agggtcacagtgaacaggtttgggttgttgtttaaaagtatggagctttatttttagacttgtgttatatttgggcatttccatttaaatagaagtgtac  14647700      --------->At4g35610      <---------At4g35610      <---------ZAT2     --------->MYB111(2)    <--------P                                                  --------->AtMYB61  <------MYB46(1)                                            --------->AtMYB61  <------MYB83                                              <---------MYB55(2) ->TEIL                                               --------->ANAC58                   ----------->GT1 ->ZAT18                                   <---------MYB59  --------->MYB46(3)  <---------At4g35610 --ZAT14                <------ZmHOX2a(1) --------->ANAC46 ------>MYB83         --------->At4g35610 ->ZAT14              <---------TOE2(3)   --------->ANAC58 ------>MYB46(1)      <---------ZAT2 --------P   --------->REM1(1)            --------->ANAC58 -------->P           --------->ZAT2      - --ZAT18 --------->At4g35610      <-----------HVH21   --------->ANAC58         ------>NtERF2<--------   ttgtaggtagctgctacaactaataaggaagttgatggtcacatacccaattacccaagcctaccaccacaattgatatgccagctccataatgttacaa  14647800  Previous    Next  AGI:  At5g37020.1    Description:  ARF8 (AUXIN RESPONSE FACTOR 8); transcription factor. Identical to Auxin response factor 8 (ARF8) [Arabidopsis Thaliana] (GB:Q9FGV1;GB:Q9ZTR9); similar to ARF6 (AUXIN RESPONSE FACTOR 6), transcription factor [Arabidopsis thaliana] (TAIR:AT1G30330.1); similar to ARF6 (AUXIN RESPONSE FACTOR 6) [Arabidopsis thaliana] (TAIR:AT1G30330.2); similar to auxin response factor 8 [Solanum lycopersicum] (GB:ABS83388.1); similar to Auxin response factor 12 (OsARF8) (GB:Q258Y5); similar to auxin response factor 8 [Ipomoea nil] (GB:ABN10955.2); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Aux/IAA-ARF-dime Range:  from: 14647258    to: 14651617    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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