Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------TOE1(2)   --------->ARR14(2)   <---------ARR14(2)   <---------ARR11(3)   --------->ARR11(3)  --------->RVE1(1)                                                                   <---------YAB1 ---------GLK1(2)                                                                 <---------GLK1(2) ------>LBD16          <---------At4g35610                                      --------->LBD16 ----->HSFB2a(2)       --------->ZAT2                                          ------->GAMYB ------HSFB2a(2)       --------->At4g35610                                    <---------LBD16 -ZmHOX2a(2)         <---------DEAR3(1)                                      --------->MYB52(1) -->AGP1 ------>ZmHOX2a(1) ----------->ARR10             <------ZmHOX2a(2)   -------->P--------->ATHB12 -->ARR11(3)        <---------At4g35610         ----------->RAV1(1)        --------->MYB46(3) ---ARR14(2)        <------NtERF2   ------>NtERF2 <---------ALFIN1       --------->TOE2(3)         <- -->ARR14(2)        --------->At4g35610         <---------ALFIN1        --------->REM1(1)         <--   cagaatatctcctagttttcgcagcggctgagttactccgactcaatctcccacactggatcaaaatcgcatctacatcaaccggattatgattcgaacc  14639800                                       <---------ETT(2)                                    <-----------RAV1(1)                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 <---------ARR11(3)                                 <---------AGP1                                 <---------ARR11(1)                                 <---------ARR14(2)                                 --------->GLK1(2)                                 --------->ARR14(2)                                 <-----------ARR10                                <---------ARR14(1)                                <---------CCA1(2)                               --------->LBD16                              <---------HSFB2a(2)                              --------->HSFB2a(2)                             <---------LBD16                         --------->HSFC1(2)                         --------->HSFB2a(1)                         <---------HSFB2a(1)                         <---------HSFC1(2)                        <---------ARR14(2)                                                        ---                        --------->ARR11(3)                                                        <--                        --------->ARR14(2)                       <----------DOF2             <-------                        <-----------ARR10                       <---------ANAC58       <---------ALFIN1                        --------->GLK1(2)                       <---------ANAC58       --------->ZAT6 -------P               <---------ARR11(3)          --------->ATHB12               --------->ANAC58 -------MYB52(1)       <---------GLK1(2) <------NtERF2<---------GLK1(1)            --------->ANAC58   ggttgatttcacatcggaaacagaagaatcttccggatctgtcgtcgtcttcgatgatttctcatggcttctccgatgttttatcacgaacacttctttc  14639900              <-----------GT1              <---------ARR11(3)            <---------YAB1          <--------HAHB4          --------->YAB1         <---------YAB1  <---------ANAC58                          <---------TOE1(2)  <---------ANAC58         <----------DOF2  <---------TOE2(2) --->ZmHOX2a(1)         ------->TEIL      <---------ANAC58        ------->TEIL -------LBD16 --------->ARR11(3) <<<<<<<<<TBF1      <---------GLK1(2) ---DOF2 --------->ICU4<---------CCA1(2)  <---------ANAC58       <---------CCA1(2) <----------DOF2---   ctcggcttgctattattatcttcttgtatcttttcttcttcattccttggtttcgattcttctacttgaatcttcttctcttgtgcttctagtttcagag  14640000                                    --------->HSFB2a(2)                                    --------->ANAC58                       --------->CCA1(2)         --------->LBD16                      <---------AGP1<---------ANAC55(2)                      --------->AGP1--------->ANAC55(2)                      <---------ARR11(3)       <-------TEIL                      --------->ARR11(3)       ------>ZmHOX2a(2)                      <---------ARR14(2)      <------ZmHOX2a(2)                      --------->ARR14(2)     --------->AGP1                     <---------CCA1(2)       <---------ARR14(2)             --------->GLK1(1)      --------->ANAC55(1)                                          ----            --------->ARR14(2)      --------->ANAC46                              --------->ARR14(2)            <---------ARR14(2)      --------->ANAC58--------->WOX13(1)            <---------ARR14(2)           <------NtERF2------>ZmHOX2a(2)    --------->ARR14(2)                   --------->ARR11(3)-         <---------ANAC46          <---------LBD16<---------MYB52(1)              <---------ARR11(3)-         <---------ANAC58         <-----------GT1<-----------HVH21               <------ZmHOX2a(1)  -         <---------ANAC58 ----------->GT1    --------->ARR11(3)               <------ZmHOX2a(1)  <---        <---------LBD16<------ZmHOX2a(2)     <---------ARR11(3)         <---------ANAC58<---------At4g35610 ------>ALFIN1      ----------->ARR10      ----------->ARR10            <---------ANAC58--------->At4g35610   gtgtatcaatggcggatttgttcagatctggtgattttacggaacaagatccgtcaattagagaagatgaagaagcttgaggaggatttttgctgagaca  14640100        --------->At4g35610 ----->At4g35610 ------->P     --------->ARR11(3) -------->ANAC58       <---------At4g35610                                               --------->GLK1(2) -------->ANAC58       --------->At4g35610                                              <---------GLK1(2) ------At4g35610    ---------->DOF2   <xxxxxxxxxxxxxxxxsmallRNA(s)     *TSS    ---------->DOF2  <----   gcaacccatttgctgaagaaattgaagcagacgctcttggtgaagaagatgaagagagcgtttttgagtttgaagaaattcaaaagttcaaattctgagg  14640200                                                           --------->AHL20(2)                                              <---------MYB52(1)                                    <-------TEIL   <---------AHL20(2)                                   --------->CCA1(2)       <---------AHL20(2)   <---------DAG2                 --------->ARR11(1)   <---------AHL20(2)   <----------DOF2                --------->ARR11(3)   --------->AHL20(2)            <----------DOF2< --ZmHOX2a(1)  --------->ICU4 ---------->DOF2<----------DOF2--------->MYB52(1)   <----------DOF2    <   agaaacttttttttgaaatgttgatattagagaaaagatacaggtccctttagtttattaattaactgaaatatgtctactaactttctttatatgtatt  14640300             --------------->AGL15             <---------------AGL15             ------>ZmHOX2a(1)                                                               <------ZmHOX2a(1)     ---------->DOF2                              <---------ANAC58                     <----------DOF2 ---------AHL20(2)                     <-----------GT1                           --------->YAB1 -----------GT1               <-----------GT1     <---------ANAC58             <---------WOX13(1)   atttacatatagctcctcaaataagaaacttatcacttgtttcacccttgagtcttgtctcgagtcgaaattgtagactagattgataactttgaggagt  14640400                                     --------->ANAC58                              ---------->DOF2                                                  ------                           <-------GAMYB                                      <---------MYB52(1)                          <------MYB46(1)                   >>>>>>>>>TAC1    <---------RAP2.6(3)                          <------MYB83                      --------->At4g35610    <---------ANAC58  <---------ANAC58        <---------MYB46(3)                <---------At4g35610    <---------ANAC46  <---------ANAC58    <-----------RAV1(1)                   <-------GAMYB------------>MYB.PH3(1)-----  ----------->GT1     <---------MYB46(3)  <---------HSFB2a(1)      ---------->DOF2 <---------ANAC58  <---------ANAC46 <----------DOF2   --------->ANAC58   ------------>AtMYB77----------->GT1    <-----   tttggggtgaattgaaattgacttttgttggttaaagggaaggaacatttgaaatattcgacagttggcaaaagagagccgttatacgtggaagagagat  14640500            --------->WOX13(1)       <---------AHL20(2)    <---------AHL20(1)    --------->AHL20(1)    --------->ARR11(3)    ------->TEIL                        <---------TOE2(3)    <---------ARR11(3) ----------->HVH21                     ---------->DOF2          <-----------GT1 --->ARR11(3)        --------->At4g35610           --------->YAB1            <----------DOF2 ---->CCA1(2)        <---------At4g35610          <---------ATHB12          <---------ICU4 ----ARR11(3)        ------>ZmHOX2a(1)   ---------->DOF2  <----------DOF2 --------->GLK1(2)   -------   atagaatattttatcaattagtcctctgaacgttttttttttcaaaagcgaaatcatcttctttaaagttccaaataatctttatattatacgagtttaa  14640600                      <---------ANAC55(1)                      <---------ANAC46                ------->TEIL                     --------->GLK1(2)               <---------AtLEC2                  --------->ARR11(3)       --------->At5g28300                      <---------GLK1(2)      ----------->GT1 --------->ANAC55(2)   ---------->DOF2                   ----------->GT1   --------->MYB52(1) <---------ANAC55(2)<---------YAB1             ----------->GT1  <-----------GT1 -->AHL20(2)  <-------TEIL            --------->ICU4             <---------AtLEC2  --------->ICU4  --   atttctaacggttaaatgcatgttatgtgttttttgtctgattatgaaaagaatcttggaagaatttccatggttactagtagtaattttcaagttttaa  14640700  Previous    Next  AGI:  At5g37010.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76723.1) Range:  from: 14637962    to: 14640171    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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