Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              -------                                                                                           <---------WRKY38(1)                                                                                           <---------WRKY45                                                                                           <---------WRKY12                                 <---------GLK1(1)                                        --------->WRKY18(1)                                 <---------ARR14(2)                               --------->HSFB2a(2)                                 --------->ARR14(2)   <-----------ARR10           <---------HSFB2a(2)                           ------>MYB46(1)            --------->ARR11(3)      <----------DOF2 -------                           -------->P                 <---------ARR11(3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                           --------->MYB52(1)         <---------ARR14(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              --------->YAB1  --------->ANAC46       --------->GLK1(1)------->GAMYB     <------MYB46(1)       --------->MYB52(1)  ------>MYB83       --------->GLK1(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---------AHL20(2)<-----------GT1--------->GLK1(1)--------->LBD16  --------->MYB52(1)<------ZmHOX2a(1) ------->AHL20(2)--------->AHL20(2)           --------->ARR14(2)   <---------DOF5.7(2)  <------MYB83< --->GT1  ----------->GT1 ------>ZmHOX2a(1)   <---------ARR14(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ataaaattcaaacggataataaactatcctacccgaattccgaaccaaaatccgaatatctagcttagataacggtatgtctttctaggatggtcaacgc  14611800                                                                  ---------->DOF2                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                           <---------AHL20(2)                                                           --------->AHL20(2)              <---------YAB1                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                         <---------AHL20(2)       <---------TOE2(3)                                                         --------->AHL20(2)       <---------TOE1(3)--                                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     <---                                                       <---------AHL20(2)       <---------AHL20(2)<--                                                       --------->AHL20(2)      --------->AHL20(2)<---                                                     --------->AHL20(2)    <xxxxxxxxxxxxxxxxsmallRNA(i)                                                     <---------AHL20(2)  ----------->RAV1(1)     <---                                                   --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <-----------GT1                          <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -->ANAC58                                       --------->AHL20(2)--------->DAG2---------->DOF2 <--- -->ANAC46                     ------->MYC3    <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -->ANAC58<---------At4g35610  <-------MYC3    --------->AHL20(2)<---------AHL20(2)        <xxxxxxxxx xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------->DOF2 <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   attcttatatttagctcatatatgaaatgaccacatgtaaagttgatatatatatatatatatatatataaagggccacaatttaaagttgttatcagtc  14611900                                            <---------AHL20(2)                                            --------->AHL20(2)                                           <---------AHL20(2)                                        <--------ATHB1                                        --------->ATHB12    <-----------HVH21                   --------->YAB1    <-----------TGA1                    <---------ICU4   --------->ANAC46                    --------->ICU4                                              <x  <---------TOE2(3)                    <---------ATHB12                                <xxxxxxxxxxxxx  <---------TOE1(3)                    <---------YAB1                                 <---------AHL20(2) <---------DOF5.7(2)                <---------WRKY12                                 --------->AHL20(2) ------->DOF5.7(2)                  <---------WRKY38(1)                            <xxxxxxxxxxxxxxxxx ------MYB46(3)               <---------ANAC58         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         <xx -----GAMYB       ----------->GT1  --------->WRKY18(1) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <---- ---MYB46(1)    <---------ANAC46 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            <xxxxxxxxxxxxxxxxxx ---MYB83  <-----------GT1    <---------AtLEC2       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       ----- ------DEAR3(2)xxxxxxxxxxxxxxxx>smallRNA(s)--------->AHL20(2)  --------->WOX13(1)<xxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxsmallRNA(se3)  <---------ANAC58     <---------AtLEC2         <-----------GT1   <xxxxxx   ggttaacgtcatataacgtcgtgtaaattttggcatggtcaatgattaaatttgtatgaaatagtccatcaacgatttttacatgtattaaatagtcaca  14612000                    <---------RVE1(1)                   --------->ARR11(3)            ---------->DOF2 xxxxxxxxxxxxxxxsmallRNA(i)                 ---------->DOF2                           <---------ZAT14 xxxxxxxxxxsmallRNA(si3)             <---------ANAC58                      <-----------GT1 xxxxxxsmallRNA(le3)<---------CCA1(1)<---------ANAC58          --------->AHL20(1)     --------->ZAT14 xxxxxxxxxxxxxxsmallRNA(s)           --------->ANAC55(2)       <---------AHL20(1)     --------->ZAT18 ---MYC3      <---------AHL20(2)--------->ARR14(2)             <---------AHL20(2)    <---------ANAC46 xxxxsmallRNA(si3) <---------ARR11(3)<---------ANAC46          --------->AHL20(2)   <---------------AtSPL8 -->MYC3     --------->AHL20(2) <---------ARR14(2)        --------->LBD16<---------AHL20(2) xxxsmallRNA(fl3) --------->YAB1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->AHL20(2) <-------- xxxxxxxxxxsmallRNA(i)  <---------AHL20(2) <---------AHL20(2) <---------ATHB12<----------DOF2   tgcgaagttcacatattaaatgatattttttgaaaattcgcgtattaaaagaaaagtttccccaattaattgcatttaaactttattgtgtacagaattg  14612100                           ----------->GT1                           <---------DEAR3(2)                          <---------ATERF1(2)                          <---------MYB46(3)                          --------->RAP2.6(2)                                     --------------->AGL15                          --------->ATERF1(2)                        ------>MYB83 --------->TOE2(3)                         --------->SPL7                       <---------KAN4(2)  <-----------------AGL3                     --------->DEAR3(2)                      --------->YAB1      <-----------------AG     --------->TOE2(3) <---------SPL7                    ---------->DOF2       <-----------GT1      - -GLK1(2)          <-----------GT1                ----------->GT1    ------>MYB46(1)               --   catcaaaacttaacccaaaataaaccggccggtacaaatcggttaacaaactctgttaaaaaagaataacctagccccttaaaacctcatttggaactca  14612200                                                             --------->GLK1(1)                                                            ------->TEIL                                                            --------->GLK1(2)                                                            <---------ARR14(2)                                                            <-----------ARR10                                                            <---------ARR11(1)                       <---------ZAT2                       --------->ARR14(2)           *TSS        --------->At4g35610                 <---------ARR14(1)          --------->LBD16                                --------->DEAR3(1)         --------->HSFB2a(2)                           --------->At4g35610         ----------->GT1                               ------>NtERF2         <---------HSFB2a(2) <-----------HVH21         --------->LBD16        <---------LBD16<---------At4g35610            --------->ANAC46       --------->MYB52(1)    <---------MYB52(1)       --------->DEAR3(1)      <---------ARR14(2)    --------->LBD16          <---------LBD16      --------->ARR14(2)  <---------LBD16       <---------GLK1(2)<---------ALFIN1   --------->GLK1(1) -------->DAG2         --------->ZAT2    --------->DEAR3(1)<---------GLK1(2)        <---------GLK1(1) -------->DOF2     <-----------RAV1(1)  --------->DEAR3(2) <---------CCA1(2)   <---------LBD16    ---   aaaaagcagtaccggaaaataatgctgctccggtcatttcgcaccgtcgagcttctccgccgaatctccacttcttcagtctctggatatcgaacttctc  14612300                                                       ----------->RAV1(1)                                       --------------->AGL15                                     <---------At5g28300  ------->GAMYB      --------->ANAC46                                    <-----------GT1   --------->MYB46(3) <-----------HVH21   <----------DOF2         ---------->DOF2    ----------->GT1      ------>ZmHOX2a(1)     --------->GLK1(2)   <---------DAG2     <---------ANAC58 <---------------AGL15       <----------DOF2      <---------GLK1(2) --->ZmHOX2a(1)       <---------ANAC58----------------->AGL1      ----------------------->TaNAC69(2)   cttcacttttacaacgttgcaatggcttccaaagctatttaccacacagagtaacaacaacagagagtcctttcccttcacacatctctcgattctgttc  14612400                                                                                                <----                                                                                           <---------DEAR3(1)                                   --------->ANAC58                                       <---------LBD16                                   --------->ANAC46                                     --------->ANAC46                                   --------->ANAC58                                    <---------At5g28300                          <---------ARR14(2)                       <-------GAMYB       <---------LBD16                          --------->GLK1(2)                       ----------->GT1  <---------GLK1(1)                          --------->ARR14(2)                 --------->ANAC46     <---------ARR11(3)                      --------->YAB1        --------->YAB1  <---------LBD16       --------->ARR11(3)<           --------->ARR14(2)    --------->ANAC46         <---------REM1(2)   ---------->DOF2<------NtERF2           <---------ARR14(2)  <---------ALFIN1     <---------MYB52(1)   --------->MYB52(1)<---------ANAC46   ttctcagagcgcgaattcgcaaaatgagaatcgacacacgactctatcatcaccggtttcttcacggagggttaataacagaaagatttcacggcggagg  14612500                                      <---------MYB46(3)                                  <---------ARR14(2)                                  --------->ARR14(2)                                 <-------GAMYB                                 --------->ATERF1(1)                                 <------NtERF2                                <---------MYB46(3)                               <---------ANAC46                              <---------LBD16                              <------NtERF2                              --------->ATERF1(1)                              <---------At4g35610                             <---------ORA47(2)                             <---------RAP2.3(1)                             <---------DEAR4(2)                             <---------ERF1                             ------>NtERF2                             <---------ATERF1(1)                             <---------RAP2.6(1)                            <---------ATERF1(2)                            <---------RRTF1(3)                            <---------RAP2.3(3)                            <---------RAP2.3(2)                            --------->ATERF1(2)                            <---------DEAR3(1)                            --------->DEAR3(1)                            <---------RRTF1(2)                           --------->RAP2.3(1)                           <---------ABI4(1)                           <------NtERF2                           --------->ATERF1(1)                            <-----------GT1                          <---------ERF1<--------P                      <----------DOF2                          <---------RAP2.3(1)                          ------>ZmHOX2a(2)                          <---------RAP2.6(1)                          ============================HOX2a_HOX2a                          <---------ORA47(2)                          =============================HOX2a_HOX2a            <---------YAB1<---------ATERF1(1)                         <---------RVE1(1)            --------->ICU4------>NtERF2 <---------MYB52(1)            <------ZmHOX2a(2)          --------->YAB1  --------->LBD16 --------->ATHB12           <---------ARR14(3)          <---------ICU4  <---------DEAR4(2)                         <---------ARR14(2)         <---------ATHB12--------->DEAR3(1)                          <-----------ARR10         --------->ICU4  <---------RAP2.3(2)                         <---------AGP1   ----------->GT1       --------->ATERF1(2)                         --------->ARR14(3)   <------NtERF2         <---------DEAR3(1)                          --------->ARR11(3)  --------->LBD16        <---------ATERF1(2)     <---------ANAC58    <---------ARR11(3)            <-  ----------->GT1       --------->ATERF1(1)      <---------ANAC58    --------->ARR14(2)         <---- <---------ANAC46       <---------LBD16<-------GAMYB          <---------MYB46(3)   --------->HSFB2a(2) --ZmHOX2a(1)    --------->WOX13(1)  <---------RAP2.6(2)     --------->ALFIN1      <---------HSFB2a(2) ---------LBD16<---------YAB1<---------RRTF1(1)  <---------ANAC46  ----------->ARR10        ------>ZmHOX2a(1)   aaggcgggaaaatcattatcaatctcgccggcggcggatgcggttgatttggcgttagactcagtggtgaagatctttactgtttctacaagtcctagtt  14612600      <---------ANAC58                      ----------->GT1            <----------DOF2      <---------ANAC58         <-----------ARR10                      <---------ANAC58           <<<< ---------DOF2                 --------->GLK1(2)            <----------DOF2                     <---- -------GT1                   <---------GLK1(2)  --------->ICU4       <---------ANAC58     --------->ICU4   actttcttccttggcagaataagtctcaacgagaatctatgggctctggtaatacttagtctctttggaattgcttcaagtgtgattttggtgattttta  14612700  Previous    Next  AGI:  At5g36950.1    Description:  DEGP10 (DEGP PROTEASE 10); serine-type peptidase/ trypsin. Identical to Protease Do-like 10, mitochondrial precursor (DEGP10) [Arabidopsis Thaliana] (GB:Q9FIV6); similar to DEGP3 (DEGP PROTEASE 3), serine-type peptidase/ trypsin [Arabidopsis thaliana] (TAIR:AT1G65630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15604.1); similar to hypothetical protein OsJ_017802 [Oryza sativa (japonica cultivar-group)] (GB:EAZ34319.1); similar to hypothetical protein OsI_019296 [Oryza sativa (indica cultivar-group)] (GB:EAY98063.1); contains InterPro domain Peptidase S1 and S6, chymotrypsin/Hap; (InterPro:IPR001254); contains InterPro doma Range:  from: 14612211    to: 14615601    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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