Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->MYB52(1)                                                                                          --------->AtMYB61                                                                                         <---------MYB55(2)                                                                                         --------->MYB46(3)                         --------->ZAT14                                               --------->ANAC58                         <---------ZAT14                                               --------->ANAC46   <---------ALFIN1  <-----------GT1                  <---------KAN4(1)                --------->ANAC58  --------->ZAT14    --------->YAB1                   --------->KAN4(1)   --------->TOE2(3)---------- -------->ANAC46     <---------ICU4           --------->ZAT6      --------->ANAC46 --------->ANAC46 -------->REM1(1) <---------ICU4        --------->ANAC58          --------->ANAC58 --------->ANAC58 ---->At4g35610   --------->YAB1        --------->ANAC58          --------->ANAC58 --------->ANAC58   ctacaacactctcatccaaataatcactatacttcaacaaaaacgctaacacaagaacaatccactctaagcaaaacatcaatacacacaaaccaccaga  14502200                                                         <---------ARR14(2)                                                         --------->ARR14(2)                 --------->DEAR3(1)   --------->ARR11(3)<---------GLK1(1)               <---------At5g28300    <---------ARR11(3)--------->GLK1(1)                      <-----              <-----------GT1    --------->TOE1(2)    <------ZmHOX2a(1)                    <---------At4g35610             <---------ZAT14    --------->YAB1      <---------TOE2(3)             <---------ZAT14         <-----------GT1   --------->HSFB2a(2)     --------->MYB52(1)         --------->YAB1 ------>NtERF2    --------->ANAC55(2)    <---------HSFB2a(2) ------->TEIL  ----------->RAV1(2)  --------->ZAT14 ->RAV1(1)   --------->ZAT14--------->LBD16   <---------ARR11(3)     <---------ANAC46     <---------ATERF1(1)   gagtttaagtatcacttcaccgtcttcttcccgaacataagatttcaagaacctaaggaaatcccctgttctcgtgaatatcagaacagagacagcgcct  14502300                                                                        <------ZmHOX2a(1)                                                                   --------->ALFIN1                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                               <------NtERF2                   ------                                                               <-------GAMYB                  <------                                                              <---------MYB46(3)              -------                                                             <---------ANAC46             <---------LBD16                                                             <---------RAP2.6(2)         --------->ZAT2                                                             <---------ANAC58            --------->At4g35610                                                             <---------ANAC58         --------->At4g35610                                                            <---------LBD16           <---------At4g35610                                                            --------->ATERF1(1)       <---------ZAT2                                                            <------NtERF2             --------->ZAT2                                                           <---------MYB46(3)     <------ZmHOX2a(2)                                                           ------>NtERF2--------->ATERF1(1) ---------                 <-----------RAV1(1) ----------->GT1      <---------DEAR3(1)     --------->ARR14(2)                 --------->ALFIN1  ------->TEIL           --------->ALFIN1       <---------ARR14(2)              <------ZmHOX2a(1)  <---------ZAT14          <---------AtMYB61      --------->ARR11(3)--          <---------MYB52(1)    ----------->HVH21         ----------->HVH21      <---------ARR11(3)<-        <---------ANAC58     <-------MYC3                <---------ABI4(1) <------NtERF2--------->DEAR3(1)        <---------ANAC58  --------------------->WRI1   <---------DEAR3(1)<---------DEAR3(1)--------->RAP2.6(2) ----ANAC46--------->REM1(2) ------->MYC3             <---------LBD16   =================HOX2a_HOX2a<   tggaaaatggccgtgaggactgtggctaccatgtgtgaaccgtataatctatcgctcgcggtggcggatgtggaggaggcgaagatcgagcagccggata  14502400      <---------YAB1      <---------ANAC58      <---------ANAC58  <-------GAMYB                 --------->DAG2 <---------MYB46(3)            --------->MYB52(1) --->GLK1(1)                  --------->CCA1(2) ---ARR14(2)                 --------->ARR11(3) -->ARR14(2)             <------ZmHOX2a(1) >LBD16            <---------ZAT14                       ----------->ARR10 ------->LBD16     --------->REM1(2)              --------->CCA1(2)                  <-------TEIL --------LBD16     --------->ZAT14         --------->LBD16                        --------->At4g35610 ---------DEAR3(1)--------->ALFIN1      --------->MYB52(1)  --------->CCA1(2)  <------ZmHOX2a(1)<----   ccgcggttgcgattgtgagagtgtagaggaagataagggagagaccggagagagatgggaagagacggagggagattgtgaggaagatgcaacttgaggc  14502500                                                <----------DOF2                                               <---------DAG2                                              <---------ANAC58                                              <---------ANAC58                                          <-------GAMYB                                         <-----------RAV1(1)                                         --------->ALFIN1                                     <---------ANAC58                                     <---------ANAC58                                    <---------ARR11(3)                                     <---------ANAC46                                    --------->ARR11(3)                                   <---------ANAC46                      --------->HSFC1(1)         <------ZmHOX2a(1)     --------->ARR11(3)                        --------->HSFB2a(2) ------CDC5<---------REM1(1)   <---------ARR11(3)                        <---------HSFB2a(2)<--------   tgagcctaagaggatgtagttgcagagaaggaagatgttgtgtgtgttgcctttcgatttcgacattcccattttctcgaattcaagaagagaactttgg  14502600                                               <----------DOF2                                           <---------ZAT18                                           --------->ZAT14                              <---------TOE2(3)                                           <---------ZAT14                       ---------->DOF2                                       *TSS--------->ZAT18                 --------->ANAC58                <---------YAB1   <---------ANAC58                          --------->ANAC58      ---- --DOF2        <---------TOE2(3) <---------ANAC58 --------->ATHB12    <-------TEIL      <---------TOE1(3)   tttttttttggggttttgatgtttgtttttgtgtttcttgataagttcactttgatttggggtttatatgcatacataagaaacaaagttgaggtaagag  14502700                                                                                               ------                     <---------At5g28300                                                      <------                    <-----------GT1                                                           -------          <-----------RAV1(1)                                                              <---------REM1(1)       --------->GLK1(2)                               <---------YAB1                      --------->ALFIN1      <---------ARR11(3)                            <---------MYB52(1)                  <---------TOE1(3)      --------->ARR11(3)  <---------MYB46(3)       <-------GAMYB<------ZmHOX2a(1)       <---------TOE2(3)      <---------GLK1(2)------->GAMYB           ------------>MYB.PH3(1)             --------->WOX13(1) ------>DOF2        --------->MYB52(1)        ----------->HVH21<----------ID1 <--------ATHB1 --------   aaagtagagattttgttgggattaacggtcgtttttgtttttgaaaatatgaccgttatgacttaaggacgaagacagaataattcaattaaggtgtaac  14502800                                                                                             --------                                                                                         <---------ALFIN1                                                                                      --------->PCF2        <---------DAG2                                                              <---------GLK1(1)        <----------DOF2     <---------WOX13(1)                                  <---------ANAC46 --->RAP2.6(3)            --------->ATHB12                       <---------WRKY38(1)--------->GLK1(1) -----GT1                <---------AHL20(2)                      <---------WRKY12 <-------GAMYB -->MYB52(1)             <---------YAB1                      <---------TOE2(3)  --------->ETT(1) --->HVH21  <---------AHL20(2)      <---------AHL20(2)       <---------TOE1(3)<-----------HVH21   ggctcgataactttttaatcttgttttttaattggtttttaatagtatggttttgtaagttttaaggtcaactatgtgaatgtcggatgtcccactgaag  14502900                                                                                             <-------                                                                                           --------->YAB1                                                                                          <---------YAB1                                                                                          -----------                                                                                        --------->YAB1                                                                                       <---------YAB1                                                                                       --------->ICU4                                                                                     --------->YAB1                                                                                    <---------AHL20(2)                                                                                 <---------ARR11(3)                                                                                 --------->AHL20(1)                                       --------->ATHB12                          --------->AHL20(2)                               <---------ICU4                                    <---------AHL20(1)                              --------->ICU4<---------ANAC46   --------->ARR11(3)<---------AHL20(2)                             <---------AHL20(2)   --------->ANAC46          --------------->AGL15              --------->AHL20(2)      <---------AHL20(2)     --------->ANAC58    --------->ARR11(3) ->ZAT14   --------->YAB1   --------->YAB1 <---------MYB46(3)--------->ANAC58   --------->AHL20(2)   acactaatttgtttcataaaatgagatttataaaaattagtttattgggtagacacaattgataagaaattgagtttgctaaatatattatgatgataaa  14503000                                                   ---------->TaMYB80                                            ---------->DOF2                                         --------->ANAC55(1)                                        <                                         --------->ANAC55(2)                                    <----                                         --------->ANAC46                                       <----                                         --------->ANAC58                                       <----                                         --------->ANAC58                                      <-----                              ---------->DOF2--------->DAG2                     --------->AHL20(2) <-     <---------DAG2        --------->YAB1<---------ANAC55(2)                    <---------AHL20(2)--- --YAB1        --------->WOX13(1)    ----------->RAV1(1)            <-----------HVH21       --------- >GT1<----------DOF2     <---------YAB1<---------ALFIN1            ----------->GT1       <---------TOE2(3)   taatacactttatttgttaatcagtttattaataaagtccaacacgtaaagggaatatcaattttagaatggtcacattagtttaaatgttaagaatagc  14503100  Previous    Next  AGI:  At5g36800.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G36710.1); similar to unknown [Brassica rapa] (GB:ABL97950.1); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 14501795    to: 14502639    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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