Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->AHL20(2)                               -                                     <---------WRKY18(1)                                         ----                         <---------ICU4   ------>MYB46(1)                                       <----                         --------->YAB1--------->DEAR3(2)                                       <----                        --------->ICU4 -------->ZAP1                                            <----                      --------->YAB1 <-----------GT1                               ---------->DOF2  -            ----------->GT1   ------->TEIL------>MYB83  --------->YAB1      <---------MYB46(3)  -----   attgaaatatagaatggttaacaagaataatgaacattttgaccgactcttaaaaaaatcaaaacatgtcttagagatttgttgaaaaagactttccaac  14426000         ------>ZmHOX2a(2)        <------ZmHOX2a(2)      ------->GAMYB     <---------MYB52(2)     --------->MYB46(3)   --------->MYB52(1)                                               <----------DOF2 -------->ANAC46                                        <---------AHL20(1) --->GAMYB   ---------->DOF2        <----------ID1      --------->AHL20(1) -----MYB55(2)                  <---------TOE2(3)       --------->ARR11(3) -----MYB52(2)                ---------->DOF2           <---------ARR11(3) -----MYB111(2)            --------->YAB1              --------->CCA1(2)                ---------->DOF2 -------->YAB1            <---------ATHB12            <---------ARR11(3)      --------->AHL20(2) ---->MYB46(3)            <---------ATHB51            --------->ARR11(3)   --------->YAB1<---------TOE2(3)   aaacacaacgatcgcaaaagacttcccaataataaaggaagacaaaattccatatagatatatttcatgtcttttaatcaaaaaatagattaaagaaaaa  14426100                         <---------YAB1                       --------->YAB1                      <---------YAB1                    --------->YAB1                               --------->CCA1(1)                   <---------YAB1                            --------->AHL20(2)              --------->LBD16                                <---------YAB1          --------->MYB52(1)                             <---------ANAC58         <---------GLK1(1)                               <---------ANAC46                        ----         --------->GLK1(1)                               <---------ANAC58                        ----         --------->CCA1(2)                            <--------P --------->RVE1(1)             <-----        --------->ARR11(3)                           <-------GAMYB                             ------        <---------ARR14(2)                          <---------MYB46(3)              <-----------GT1        <---------ARR11(3)                         <---------AtMYB61         ----------->GT1  -------        --------->ARR14(2)                       --------->CCA1(2)     --------->AtLEC2     <--------   tgcaaaacaagatacccgaatattatgatgtttgagcaatggatgactaagagatggttgcttataaatatccatgcagtcgtaaataacatttttaccc  14426200 -->MYB83                         <-----------GT1 -->MYB46(1)             ----------->GT1           <------ZmHOX2a(2)          <----------DOF2 ----MYB59              --------->DAG2            --------->ARR11(3)          <---------DAG2--------- --->MYB46(3)       <---------ANAC55(2)    ---------->DOF2                 <-----------GT1  <-------- -->ANAC46   --------->AHL20(2)--------->YAB1     <---------ARR11(3)   ------->TEIL--------->TOE2(3) ---GT1----------->GT1 ---------->DOF2 --------->ZAT6               --------->ANAC55(2) <---------WOX13(1)   aactacaagatgaaaaaaaatcacataaagtaaaaataacaacactaaagaagatcacagtattgtatttatgtatttcactttaccttgatggatttca  14426300                                                         --------->CCA1(2)                                                         --------->GLK1(1)      --------->ARR14(2)  -                               <------ZmHOX2a(1)         <---------GLK1(1)      <---------ARR11(3)  -                              ----------->GT1           <---------ARR11(3)      --------->ARR11(3)  <    ----------->GT1   --------->ZAT6    ----------->RAV1(1)           ------------>CBF         <----- >GLK1(1)    ----------->RAV1(1)     --------->ANAC46   --------->ARR11(3)----------->GT1      ------ -GLK1(1)  <-------TEIL    ---------->DOF2          ---------->DOF2  --------->YAB1  ------------>CBF   tatgtatagtagattcaacagataacactgaaaggataaacacaacaaaactcacaaagatatccattgaatcacaatgtaatatcttccaatttgttta  14426400                                                                                              <------                                                                                              <------                                                                                      --------->AHL20(2)                                                                                      <-----------TBP                                                                                  --------->ICU4      <---------TOE2(3)                                                          <---------TOE2(3)---    <---------AHL20(2)                                                         --------->AHL20(2) ---   <---------AHL20(2)                  <---------AHL20(2)                      <---------AHL20(2)<--- -------->AHL20(2)                     ----------->TBP                        <---------ATHB12------- -------->AHL20(1)                <---------YAB1                              --------->ICU4  ------- ---------AHL20(2)              <-----------GT1  ----------->GT1          ------------>CBF<---------AHL20(2) ----AHL20(2)        <---------ZAT6    --------->AHL20(2)            --------->AHL20(2)   <---------YAB1 --->AHL20(2)  <---------ICU4<---------YAB1 ---------->DOF2          <---------AHL20(2)   --------->AHL20(2)   aattttttaatgtttcatcagtagtgatattatgttacgatataaataaagatgtaaaatgttgaatgcattaaaatgcaattaatgtttatataattaa  14426500                                   <---------ARR11(3)                                   <---------ARR14(2)                                   --------->GLK1(2)         <---------CCA1(2)         --------->ARR14(2)      <----------DOF2              --------->ARR11(3) ---------->DOF2                  --------->RVE1(1) ---AHL20(1)                      <---------GLK1(1) ---AHL20(2)                     ------->TEIL                                                  ------ ------>YAB1                 <---------TOE2(3)                                                ------- ------>AHL20(2)          <---------YAB1                                                 ------------ ------YAB1             <--------HAHB4                 --------->GLK1(1)                 <---------YAB1 -->AHL20(1)            --------->YAB1<---------HSFB2a(2)              ------------>CBF <-----------GT1 -->AHL20(2)           <---------YAB1<---------LBD16   <---------GLK1(1)         <----------DOF2 ----   ttataaagcttttatctttcaacctattattaatgaatatctgggagtatttaagagatttctcttgccatttggcaatagttctttttttatcaatata  14426600                                                                               <---------AHL20(2)                                                                           <---------ICU4                                                                          --------->ICU4                                                             --------->TOE1(3)<---------AHL20(2)                                                             --------->TOE2(3)--------->AHL20(2)               --------->TOE2(3)                            <---------------AGL15             --------->ARR11(3)              <---------YAB1 --------------->AGL15              ------ ----->TBP   <---------ARR11(3)  --------->ANAC46           ========================================= -->AHL20(2) <-----------ARR10   --------->ANAC58    --------->DAG2       <---------YAB1       <----- >CBF  ----------->GT1           --------->ANAC58   ---------->DOF2   ------->TEIL   ------->TEIL ------>DOF2 --------->GLK1(2)<-------TEIL --------->YAB1<-----------GT1--------->YAB1        -------   aaagtcatgaggcaaaatcttagcttagtagatgcaagcaaaaaatcataaatataaagttacccttaaatgtatcataattttatgcatccaaaaatta  14426700                                      <----------DOF2                         ----------->RAV1(1)                  --------->YAB1      --------------->AGL15                                    <-----                  <---------ICU4      <---------------AGL15                            --------->AHL20(2)                 --------->ICU4       <---------DAG2                                   <---------AHL20(2)               --------->YAB1    <---------MYB59                    <----------DOF2 <---------ICU4 --->AHL20(2) <---------ATHB12   <---------MYB52(2)                <---------ANAC58<---------ATHB51 =====================================================MADS_MADS    <---------ANAC58--------->AHL20(2) ----AHL20(2) <---------ATHB51   <------------MYB.PH3(2)       <----------DOF2     <---------AHL20(2) -->AHL20(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          <-----------GT1        --------->ICU4  --   atagtatctcataccaataataatgtgccacaataactaactttattttgaaatagccaaaataactttgctttagaaaactgaaataattaaaaaaaaa  14426800                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                        <-------TEIL                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                      <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                    xxxxxxxxxxxxxxxx>smallRNA(s)                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                          xxxxxxxxxxxxxxxx>smallRNA(si3)                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                              <-                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                        <------ZmHOX2a(1)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     <--------                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                   ---------->DOF2                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                   <---------AHL20(2)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                   <xxxxxxxxxxxxx           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                      --------------->AGL15          <---------YAB1 <xxxxxxxxxxxxxxxxxsmallRNA(si3)                             <---------------AGL15       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <-----------GT1    ------>ZmHOX2a(1) -----ID1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->HSFB2a(2)                 ----------------- -------->DOF2 --------->YAB1   --------->YAB1  <---------HSFB2a(2)<-----------GT1  <----------------   acaaagaatgttatgaataatagatggatgcccattataaggctcatcatctagatgtctctagggttttacccttctcttgtactcctatataaaggat  14426900  Previous    Next  AGI:  At5g36680.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G36770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14518.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 14424032    to: 14426367    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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