Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------LBD16                             <-----------GT1                     --------->YAB1                       --------->AHL20(2)                       --------->AHL20(2)               <---------ARR11(3)<---------ARR14(2)         <---------AHL20(2)               --------->ARR11(3)<---------GLK1(2)     --------->AHL20(2)              <---------CCA1(2)  --------->ARR14(2)  ----------->GT1                       <---------            --------->AHL20(2)--------->HSFB2a(2)    --------->ANAC58        ----------->RAV1(1)      --------->ANAC46 --------->ATHB51  <---------TOE1(2)  --------->AHL20(2)         --------->AHL20(2) ------At5g28300      <---------MYB52(1) <---------TOE2(2)  --------->AHL20(1)       --------->TOE2(3) -------GT1 --------->YAB1 <-----------GT1           --------->ANAC58       --------->MYB46(3)  <----   acccctaaacacaattatatctccattattttctcgattcgcgcatgtttctctcaagtaaataaaataaaaatcccaacaacaaaacattaaaaaccct  14418300                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR14(2)                                                                                     --------->MYB46(3)                   <-------TEIL                                           <-----------GT1            <-----------HVH21                                <---------CCA1(2)       --------->DEAR3(1) --GT1  <---------ALFIN1                         <---------ANAC46    <---------MYB52(1)<---------ARR14(2) ------DOF2<----------DOF2                    ----------------------->TaNAC69(2)  <---------ALFIN1   ttctctcttcccactttcacatccatagctaaacccttgaagaagattgtttagtgtgttctcgtctcttcgtttatttcttctccaccgatccaacaat  14418400                                                                            <-----------------AGL1                                                                     <---------CCA1(2)                                                                    ------->TEIL                                                                    <---------ARR14(2)                                                                    <-----------ARR10                                                                    --------->ARR14(2)                                                                    <---------ARR11(1)                                                                   <---------CCA1(2)                                                                 <---------ANAC55(1)                                                                 <---------ANAC46             -------                              <---------MYB52(1)                 <---------ANAC55(2)          -------                  ------>NtERF2                                  --------->ANAC55(2)         <-------           --------->WOX13(1)--------->TOE2(3)     <---------TGA1a <---------ARR14(1)        --------         --------->WRKY18(1) ----------------------->TaNAC69(2)  <---------ANAC58          --------->ZAT14       --------->LBD16      ----------->GT1        --------->TGA1a--------->LBD16          <---------ZAT14     <---------LBD16   <---------YAB1       <---------CCA1(2)    <---------ANAC58          <---------ZAT18   gctactctccggtcaatctccgactctgattcgttaatctccctccgtctctctcgtctgattccttccgtatctctctctgattttggccagagcacgc  14418500                                                                                               <-----                                                                                               <-----                                                                                             <-------                                                                                             --------                                                                                            ------>ZmHOX2a(2)                                                                                           ----------                                                                                           <---------                                                                                           <---------                                         ------>ZmHOX2a(1)                                 ----------                           <---------ANAC55(2) <---------TOE2(3)                         --------->YAB1                           --------->ANAC55(2) <---------TOE1(3)                        <---------YAB1                        <---------MYB52(1)--------->ATHB12                         ------------------                       <-------GAMYB     <---------YAB1                           ------>ZmHOX2a(2)                  <---------SPL7        --------------->AGL15                   <---------AGP1 ------     --------->YAB1 --------->SPL7     <-----------------AGL1                   --------->ARR14(2) -->ANAC58        <---------MYB52(1)   <-----------------AG                     <---------ARR14(2) -->ANAC58       --------->LBD16     <---------ARR14(2)              <------------CBF<---------MYB52(1) --ZAT18        --------->ANAC46     --------->ARR14(2)     <---------ANAC58 --------->HSFB2a(2) ->ZAT18       <---------LBD16      <---------MYB52(1)      <---------ANAC58 <---------HSFB2a(2)   ttgataatcaaaatttctccggtacggttatgtaatccgtttcctgattagggttttgaatttcgtcttcgtattgtttctcgatctgttatgatcgtac  14418600     <---------MYB52(1)   <---------ANAC46  ---------->ID1 ----TOE2(2) ----TOE1(2) --SPL7 <------------CBF ->TOE1(2)                  --------->AHL20(2) ----->AtSPL8               <---------AHL20(2) ------AtSPL3       <---------MYB52(1) ------AtSPL8      <-------GAMYB                                                                    < ----->AtSPL3   <---------MYB52(1)                             --------->ZAT14                  <---- ----->TaNAC69(2) --------->MYB52(2)    <---------YAB1         <---------ZAT14      ----------->ARR10 --->SPL7      <-----------HVH21  <---------YAB1          <---------YAB1<----------DOF2--------->CCA1(2)   gtttttcgtttattgttcgtcagttattttttaattttgattttgattcgttgtgaaattttgactgtaggggtctttatatgactgagatttgagaaca  14418700                                                                <----------DOF2           ---------->DOF2                                  --------->ZAT18        ----------->GT1              ---------->DOF2     --------->ALFIN1       --------->DAG2            --------->ANAC58       <-------MYC3                    ----------->HVH21      ---------->DOF2            --------->ANAC58       ------->MYC3        <---------GLK1(1)   <---- ---------ANAC46             --------->MYB52(1)    <---------AHL20(2)      <---------ARR11(3)   <---- --------CBF               <---------MYB52(2) <---------YAB1<---------ZAT18--------->ARR11(3)  ------   ttgtgtagaaaagtaaagaaatgttagaaactaacgagcaaaagggttttgatttaaacgtgtgtgcttcaattgaagatttcagtgagtctgacattaa  14418800                        <---------MYB46(3)                       <--------P                       <---------WOX13(1)               <---------TOE2(3)             --------->GLK1(2)                      <-------GAMYB            <---------WOX13(1)   --------->DAG2   <---------GLK1(2)                     <---------MYB46(3)      --------->ATHB12 ----------->GT1  <---------ANAC58    ----------->GT1  <------MYB83<---------ANAC46 <---------TOE2(3)---------->DOF2 ----------->ARR10 -----TOE2(3)        <------MYB46(1)        <---------YAB1<------ZmHOX2a(1)    <---------ANAC58<----- -----TOE1(3)       <---------AtMYB61    --------->GLK1(2)--------->YAB1--------->ATHB12 <---------YAB1 ---->DOF2          --------->MYB59--------->ALFIN1     <---------TOE1(3) <---------WOX13(1)   <-----   ggctgagggtgaaactgatagtttggttgatggtaatgtggagaatgtgattgagattaaggataagaaaaaagtgattgagcgtgagattctcattacg  14418900                                                                        ---------->DOF2           ---                                                   <---------ICU4  ---------->DOF2                <--             <-----------RAV1(2)             --------->YAB1     ----------->HVH21         <---------MYB46(3) ----ANAC55(2)      <-----------RAV1(1)   ----------->GT1      --------->At5g28300       <---------AtMYB61 ----ANAC46  ===================RAV   <---------ZAT14         ----------->GT1          --------->MYB52(2)   cgtagggttcttcgctcaggctctgtggcaagggatttagtaaacagtgataaacattgtaaggctgtgaaaaggaaaggaaatgttgttagtggtggaa  14419000                                                                       <---------At4g35610                                                                  <---------LBD16                                                                 <---------ANAC46                                                                 <---------ANAC58                                                                 <---------ANAC58                                                                <-------TEIL                                                               --------->GLK1(2)              ---------->DOF2                                 --------->ARR14(2)          <---------ANAC46                                    <---------GLK1(2)          ----------->GT1                                     <---------ARR14(2)          --------->At4g35610                                <---------GLK1(1)  <-------GAMYB                    --------->ALFIN1          <---------HSFB2a(1)            --------- <-----------RAV1(1)            <------ZmHOX2a(1)           ----------->ARR10           <---------ANAC46 ------>ARR14(2)             <-----------RAV1(2)           <------ZmHOX2a(1)          --------->ZAT14 -------ARR14(2)      ----------->GT1                ----------->RAV1(2)              <---------ZAT14   gttctgttgatgaggtgaaagaagaagtgaaacaggagtgtgttaagtctttggtacctgaggagattcgtggagatgattttcgaagtgaagtgaaagt  14419100                   --------->At4g35610                   <---------At4g35610                 <-----------RAV1(2)                <------ZmHOX2a(2)            <---------WOX13(1)         <---------YAB1                                                                         <----       <------ZmHOX2a(1)                          ---------->DOF2                             -------       ================HOX2a_HOX2a             --------->TOE2(3)                             <-------     <---------TOE2(3)                        --------->ANAC46                        --------->WOX13(1)     <---------TOE1(3)               ---------->DOF2    <------ZmHOX2a(1)           --------->WRKY18(1) ->DOF2--------->YAB1       ---------->DOF2<---------WRKY12    <------NtERF2    --------->At4g35610   ggaatctaaggatgatagatcagatgatggaaaagaagagaaagttcaacgtaaaagaggaaggcctcgaaagtttgggatgagcagtcaatctgatgat  14419200  Previous    Next  AGI:  At5g36670.1    Description:  PHD finger family protein. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT5G36740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22541.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 14418721    to: 14423657    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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