Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------ANAC58                                                       <---------ANAC58                                                    <---------ZAT18                                                    --------->ZAT18                                                   <---------ANAC58                                                   <---------ANAC58                                                   <---------ANAC46                                                  --------------->AtSPL3                                          <---------ARR14(2)             --------->SPL7               --------->ARR14(2)          <------MYB46(1)                <---------CCA1(2)          <------MYB83                --------->HSFB2a(2) <-----------HVH21         <---------------AtSPL8  <<<<<<<<<TBF1    --------------->AtSPL8                       <-----      <-----------RAV1(1)     <<<<<<<<<TBF1    <---------MYB52(1)              <----------DOF2------>ZmHOX2a(2) -------GT1<---------SPL7 ----------------------->TaNAC69(2)         ----------->GT1 <---------TOE1(2)   acaacattttgttggtacgaagagagttgttcttcttcttctcgtatccgatagcgtacttgtcacaaaactggtaattagcttttctaggtttgatcca  14263100                                                                --------->YAB1                                                                --------->MYB52(1)                               --------->ANAC58              --------->YAB1               <---------AHL20(2)                               --------->ANAC58             --------->ZAT6        ----------->GT1                           ------->GAMYB          ----------->HVH21           <---------ZAT14  <---------ANAC58        --------->MYB46(3)    <---------DEAR3(2)            --------->ZAT14  <---------ANAC58      --------->ARR14(2)     <---------DEAR3(1)         --------->ATHB12--------->AHL20(2) ----ALFIN1         <-------TEIL               <---------At1g77200--------->ZAT6----------->GT1     <   ccttgtttgccctaaatgagggttcgtaaccacaagcttgatgccatcgtcggtgaagcctaacaataacagtaaaccattgcagtgaaaaattatatat  14263200                                                    <---------WOX13(1)                <---------ICU4                    --------->ATHB12      <---------ANAC46                           <---------YAB1            <------NtERF2 -------->ATHB1<---------YAB1                  <---------AtLEC2 <-----------RAV1(1) --------->ATHB12                            <---------YAB1    <---------TOE2(3) --------->ATHB51                        <---------DAG2      <---------AHL20(2) ---------YAB1 --------->ICU4            <----------DOF2    --------->AHL20(2)     <----------DOF2   gtattattgagtatgtcatcatcgtttaggctaatgagtttagctttatgcatgatagatgatttaatgttgttgtcgtcgttttctttgtgaattctat  14263300                                              <---------MYB46(2)                                              <---------MYB111(1)                                              <---------MYB55(2)                                              <---------MYB111(2)                                     <---------ICU4                                     --------->YAB1                                    <---------YAB1                                    --------->ICU4                                                ---                            --------->GLK1(2) --------->AtMYB61                               -------                      --------->TOE2(3)       --------->MYB46(3)                             ========                      --------->TOE1(3)      --------->ANAC46                          --------->At4g35610                   <-----------GT1<---------ICU4------>MYB83                          <---------ARR11(3)              <---------AHL20(2)  --------->YAB1------>MYB46(1)      <---------YAB1   --------->ARR11(3)             --------->AHL20(2)--------->WOX13(1)                 ---------->ID1  ---------->DOF2----  <---------WOX13(1)  --------->TOE1(2)   --------->MYB46(3)  <----------DOF2 <-----------GT1------>ZmHOX2a(1)   ggagattgacgctcattaaataaaccttagaatccatcatcatgaccaccaaacactcattttcctttgttgttattgttttaccaaagagcttcctcgt  14263400                                                                                                  ---                                                                                                 <---                                                                                               ------                                                                                               ------                                                                                             <-------                                                                                             --------                 --------->DAG2                                                             ---------         <-------GAMYB                                               --------->ARR14(2) ------>ZmHOX2a(1)        ------>ZmHOX2a(2)                                            <---------ARR14(2) =============        <---------MYB46(3)                                         --------->LBD16  ------>ZmHOX2a(2)       <---------YAB1    --------------->AGL15                    <---------HSFB2a(2)   =============     --------->YAB1     <-----------------AGL1                    --------->HSFB2a(2)  --------->ANAC46    <---------YAB1  --------->ALFIN1                             <---------LBD16   --------->GLK1(1) ------>DAG2    ---------->DOF2                            <---------ARR11(3)     <-----------ARR10 -->TOE1(1)<---------TOE1(2)                     <---------ZAT18<---------At5g28300<---------GLK1(1) ==============HOX2a_HOX2a                <---------At4g35610  <-----------GT1    <---------ARR11(3) ------>DOF2<---------MYB46(3)    <---------AtLEC2         --------->ARR11(3)     --------->ARR11(3)   aaagctatgatcgttggataaagtgttccagtttttgcaagtagagcttactgctcttatagattttaccggaaccctagagatgatctcctccaccaaa  14263500                                                                                 <----------DOF2                                                                                <---------ANAC58         <------ZmHOX2a(2)                                                      <---------ANAC58        --------->ARR11(3)                                                   <------NtERF2        <---------ARR11(3)                                                 =================bZIP_DOF ------>ATHB12                                                             <---------bZIP60(2) ------ATHB12                                   =====================================bZIP_DOF >MYB83 <---------ARR14(2)                      <----------DOF2            <---------O2 >MYB46(1) ----------->HVH21             <------MYB46(1)                   --------->O2 --MYB111(1)              <---------ANAC58    ------>ZmHOX2a(1)            <---------ANAC58 ->AtMYB61------>ZmHOX2a(2)              <------MYB83                      <---------TGA1a >ANAC46--------->ARR14(2)<---------ANAC58 ---------->ID1                  <---------ANAC46 ===============HOX2a_HOX2a             --------->MYB59              --------->ZAT6 ================HOX2a_HOX2a      ---------->DOF2     ----------->HVH21    <---------ANAC58        <-   tcatttggaagatcggacatcgccattgtcgtttctcaaagtttggtcctctttctctgactaggggattaccactggcgtggctttatatcaacaagat  14263600                                                                               <---------AHL20(2)                                                                              --------->AHL20(2)                                                                              <---------AHL20(2)                       ------------>CBF                                   --------->AHL20(2)          --------->ARR11(3)                                            ----------->GT1          <---------ARR11(3)                                          ---------->DOF2          <---------GLK1(2)                                       --------->TOE2(3)        <---------TOE2(3)   --------->TOE2(3)                   --------->ARR11(3)  ----------->GT1        ----------->ARR10--------->WOX13(1)  <---------AHL20(2) <---------ARR11(3)--------->DAG2 --------TOE2(3)       <---------ATHB12      --------->AHL20(2)<---------CCA1(2)---------->DOF2------   taatgttactaagatttttctcttaatcaatctcagtttttttttttttaaatgagtaatcttctatatcttaaaagtaattaaaaggggaaaactcctt  14263700               <---------AHL20(2)          <---------ARR11(3)        --------->ANAC58        ----------->GT1        --------->ANAC58     ---------->DOF2                      --------->ANAC46    --------->ANAC58      <-----------GT1              --------->ANAC58    --------->ANAC58  <---------AHL20(2)               ----------->GT1   --------->DAG2  --------->AHL20(1)           <-----------RAV1(1)                      <----------DOF2  ---------->DOF2  <---------AHL20(1)    <---------DAG2--------->ANAC58          <----------DOF2 ---- >ZmHOX2a(1)  --------->AHL20(2)         <----------DOF2  >>>>>>>>>>GT-3b     <-----------GT1  ------   acaaaaaagcaagttatttaatattttttcacaaagcatagaacttttttttgtggcaagaaaaatacacatcaaacatttttcttttcttcttttcttc  14263800                                    --------->AHL20(2)                                   --------->ARR11(3)                                    <---------AHL20(2)         --------->AHL20(2)        --------->AHL20(1)                                --------->AHL20(1)     <<<<<<<GRF7                       <---------ARR11(3)       <-----------HVH21        <---------AHL20(1)  <---------MYB59           <---------AHL20(2)    <  <---------TOE2(3)             <---------AHL20(2) --------->ANAC55(2)      <---------RVE1(1)       -  ------------>CBF           --------->YAB1        ----------->RAV1(2)     <---------GLK1(2)<-------- <-----------GT1           ------------>CBF      <-----------GT1<---------AHL20(2)       <---------AHL20(1) ----->WOX13(1)   <-----------TBP  --------->AHL20(2)----------->HVH21     <---------ARR14(2)   ----- ------>CBF--------->ANAC55(2)  --------->AHL20(2) <---------At4g35610     --------->ARR14(2)  <-----   aattaacaatgtcatgtgttttttatatcaacaataaattaatctgtctatttacctgacaaatattaaataagtcggattttttttagaatattttcct  14263900                                                                     --------->ANAC46                                                         <---------ICU4                                                         --------->ATHB12  ---------->DOF2                                       <---------YAB1 ---------AHL20(2)                                     <---------ARR11(3) -------->AHL20(2)             --------->ANAC58        --------->ARR11(3) ----------->GT1          -- ---GT1                        --------->ANAC46       --------->YAB1 --------->ANAC58        <------- ->ZmHOX2a(1)                  --------->ANAC58      --------->ICU4  --------->ANAC58   <------MYB83 ----MYB59       <-----------GT1            <----------DOF2        ---------->DOF2      <------MYB46(1)   aattaaaagtgtatttttgtttccaaacagacctcgcaagagagagctttacaaaatgatcattgacatacaagcagagaaaaaatttgttggtactcgg  14264000  Previous    Next  AGI:  At5g36200.1    Description:  F-box family protein. Identical to Putative F-box protein At5g36200 [Arabidopsis Thaliana] (GB:Q9FHK1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G36730.1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G36820.1); similar to hypothetical protein 25.t00068 [Brassica oleracea] (GB:ABD64961.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 14261336    to: 14263526    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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