Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------YAB1             --------->TOE2(3)            --------->YAB1           <---------ATHB12         ------>MYB83         ------>MYB46(1)       --------->AtMYB61       ------->GAMYB      --------->MYB46(3)       --------->ANAC58     ------>MYB83              --------->ANAC58     ------>MYB46(1)          --------->DAG2     -------->P --------->WOX13(1)                         <---------ATHB12   --------->AtMYB61 =============================HOX2a_HOX2a   <---------MYB111(1)       ---------->DOF2      --------->ZAT14--------->ARR11(3)               <--  --------->MYB46(3) ------>ZmHOX2a(1)            --------->ARR14(2)  <-----------GT1     <---------YAB1  --------->DEAR3(2) <----------DOF2       ------>ZmHOX2a(2)     <---------ARR11(3)      <---------GLK1(2)   cagaaccaaccaaatcatcaatcctttctcaaaaagccaatgtgatccaaagtatacactaatcaaagattttaaccaattcaacgtttcagattattgt  14252000                                                                                                    <                                                                     >>>>>>>>>TBF1          ---------             --------->ANAC58                                     >>>>>>>>>TBF1            ----------       <---------ATHB12  --------->GLK1(1)                   <----------ID1             ------>ZmHOX2a(1) --------DOF2--------->ANAC58             ---------->DOF2  --------->MYB52(1)  --------->YAB1    <---   ctttgagtaatcaagaagcaagaacagagacccttagagataccaaaagaaaacaaaaaaaaaacgaagaagaagaagtaatcttacttcctagcgacag  14252100                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                            <---------DEAR3(2)                                                                           ------>ZmHOX2a(2)                                                                           ==========================                                                                        --------->ATHB12                                                                      <----------DOF2                                                                     <---------ANAC46    --------->LBD16                                                  <---------ANAC58    <---------HSFB2a(2)  <---------LBD16                                                    <---------ANAC58    --------->HSFB2a(2) --------->MYB52(1)                                              --------->At4g35610    <---------LBD16 ---------ALFIN1                     --------->SPL7              <---------At4g35610 <---------ZAT2 -->RAV1(1)          <---------MYB46(3)       <-----------HVH21 ------->GAMYB  --------->SPL7 ->HVH21 >>>>>>>>>TBF1             <---------SPL7              --------->MYB46(3) ---------->DOF2 ---ZmHOX2a(1)       ----------->GT1--------->MYB52(1)      --------->REM1(1)<---------SPL7 ---------   gaacaccggaagaagaagagtagttgttaaacttggtcgaacggacagcatcacagatggcttcaacagcggcttgatcggtacgaaagctcgggaacgg  14252200          <---------MYB52(1)             <---------ALFIN1         <-----------HVH21               --------->AtMYB61     ------>ZmHOX2a(2)             --------->REM1(1)    <---------GLK1(1)              <---------bZIP60(1)   <---------ARR14(2)     <---------ANAC46                                            <--------P   --------->ARR14(2)     <---------ANAC58                                          --------->YAB1  <------ZmHOX2a(1)       <---------ANAC58  --------->DEAR3(1)                 --------->ANAC58     - <---------HSFB2a(1)      <---------bZIP60(2)<-----------HVH21        <---------TOE2(3)             < <---------HSFC1(2)      <-----------------------TaNAC69(2)           <---------TOE1(3)           <-- --------->HSFC1(2)    ----------->HVH21 --------->DEAR3(1)   <---------TOE1(3)<---------YAB1     --- ========HOX2a_HOX2a   ----------->TGA1 --------->MYB46(3)    <---------TOE2(3)--------->ANAC58 ----- >MYB52(1)----------->HVH21        --------->bZIP60(1)   --------->ATHB12    --------->YAB1 <--------   agaaggatcgccgtgacctagtgggatgacgggtcttacatcaccaccgtcgagacaattgattaaggtgttaaggtaatcacgaatggtaagtgagtta  14252300                                                                                 *TSS                                                                               ----------->HVH21                                                                             <---------ANAC55(2)                                                                             --------->TGA1a        ------>NtERF2                                                        ----------->GT1       --------->DEAR3(1)                                                    <---------bZIP60(2)   --------->SPL7                                                            <---------O2 <---------SPL7<---------MYB52(1)                                            --------->O2----------->HVH21 --------->TOE1(2)<---------ZAT2                                             <---------bZIP60(1) ----->ZmHOX2a(2) <---------At4g35610                                        <---------ANAC58 ---------HSFB2a(1)    --------->LBD16                                       <---------ANAC58  ------ -------ARR11(3)  --------->At4g35610        <---------MYB52(1)              <---------TGA1a  ------- ------>ARR11(3) --------->MYB52(2)<---------ANAC58                          --------->bZIP60(1) ---->MYB59--------------------->WRI1     <------NtERF2                      --------->ANAC55(2) ---------------TaNAC69(2)         <---------ANAC58      <---------AHL20(2) <-----------------------TaNAC69(2)   gatcgttcgacgacctcgttagctccgaagttccatcgcttggctccgttttctcccatttttttttttttaagaagagacgtgacaaaatgtgacaccg  14252400                                               <------MYB46(1)                                               <------MYB83                                              <---------TOE2(2)                                              <---------TOE1(2)                                             <---------MYB52(1)                                            <-------GAMYB                                           <---------MYB46(3)                                        <---------MYB46(3)                                      <-------GAMYB                                --------->ANAC46                                     <---------MYB46(3)                            --------->ANAC58                                    <---------AtMYB61                    <---------YAB1        ------          <---------YAB1            --------->ALFIN1           --------->AHL20(2)  --------->ANAC58    <---------TOE2(3)             <---------ANAC46             <---------AHL20(2)  <----------ID1   - --->DEAR3(1)                     <---------ANAC58            --------->AHL20(2)<---------ARR14(2)  < -->DEAR3(2)     <---------ANAC46 <---------ANAC58        <---------AHL20(2)    --------->ARR14(2) --   acgattttggttatgaatggtttgtgaatgggactggtgtggttgtcgttggtaaactatttcatttattttggtatgagagaaaacgccaaattttgtc  14252500                                                  ---------->ID1                                              --------------------->WRI1          --------->CCA1(2)                   <----------DOF2                       --------->ANAC46         <---------ARR11(3)                --------->ARR14(2)        <---------AHL20(1)       <---------TOE2(3)                   --------->ARR11(3)        --------->AHL20(2)          ----    <---------AHL20(2)                     <---------ARR11(3)        <---------AHL20(2)        ------    --------->AHL20(2)                     <---------ARR14(2)    <---------AHL20(2) --------->ANAC58 ---->ID1--------->ARR11(3)               --------->GLK1(1)     <---------AHL20(2)  --------->ANAC58 -------->AHL20(2)                        <---------GLK1(1) <----------DOF2         --------->AtLEC2 ---------AHL20(2)                     <---------TOE2(3)---------->ID1       <-----------GT1--------- ------->AHL20(2)                     <---------ANAC46 <-----------GT1  <---------YAB1      ---------   atttaatttaagatatgtcttactcactgattttggagtttagggtatctttgtttttttctcttttttattttatttttgactacatgcaagtatgcaa  14252600                           <---------AHL20(2)                          <---------AHL20(1)    --------->ANAC55(2)                          <---------AHL20(2)    --------->ANAC58                          --------->AHL20(2)    <---------ANAC55(2)                      <---------AHL20(2)        --------->ANAC58                      --------->AHL20(2)        <---------ANAC46                      <---------YAB1         --------->ARR14(2)                    <---------At4g35610    <-----------GT1  --------->AHL20(1)    <---------ZAT6             <---------ZAT6 <---------ZAT18 ----->ZAT6          <---------AHL20(1)   <---------TOE1(3)         --------->YAB1 --------->At4g35610 ----->RAV1(1)       --------->AHL20(2)   <---------TOE2(3)      --------->YAB1    --------->ZAT2 >ANAC58            --------->YAB1  --------->DAG2              <---------YAB1     <---------ZAT2 >ANAC58       --------->TOE2(3)   ---------->DOF2            --------->YAB1  ----------->HVH21   cactatctacaattctacataaatataattttttttaaaaagttagggttacgcataaatcgtttcataatagtattagagtgacagctccctcttggaa  14252700                                                                 <---------GLK1(2)                                                                <---------HSFC1(2)                                                             ---------->DOF2              -----------                                                             =====================================bZIP_DOF                                 <------ZmHOX2a(2)        <------ZmHOX2a(2)             --------->TGA1a                                 --------->CCA1(2)        --------->CCA1(2)             <---------O2                                --------->ARR14(2)       --------->ARR14(2)             <---------TGA1a                                <---------ARR11(3)       --------->ARR11(3)    <-----------HVH21                                <---------ARR14(2)       <---------ARR11(3)   --------->bZIP60(1)                                --------->ARR11(3)       <---------ARR14(2)   <---------bZIP60(1)  --   ---------->DOF2            ----------->ARR10    >>>>>>>>>TBF1--------->HSFC1(2)      --------->O2   cattacaaaggagaatagagaagagagaagagaagatccaaatcagacaagaagaagaagatccaaagcttctcaaaacgatgtcatcccatgtgacaaa  14252800                                                                   <-----------HVH21                                                                  ------->GAMYB                                                          <---------At4g35610                                                          --------->ZAT2                                                          <---------ZAT2 --------->ANAC58                                          <---------ARR14(2)     --------->MYB46(3)                                          --------->ARR14(2)   --------->MYB52(1) <----------ID1                                         --------->GLK1(1)--------->At4g35610  <---------ATHB12           --------->MYB52(1)        --------->ANAC58   <---------ALFIN1 --------->ANAC58         ---      <----------ID1                 --------->ANAC58 <---------ALFIN1 --------->At4g35610   -------- >HVH21  <---------MYB59        ---------->DOF2       ----------->RAV1(1)--------->ANAC46    -------- ------->YAB1                ----------->RAV1(1)     --------->ZAT18 <---------WRKY38(1)     --------   atgagaatgggccaaactgaagtataaggcccaacaaagaagcaaatccatttagcccacagctccaacggtcaccagcaaatgaagacaaaaccaagac  14252900  Previous    Next  AGI:  At5g36160.1    Description:  aminotransferase-related. similar to aminotransferase, putative [Arabidopsis thaliana] (TAIR:AT5G53970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69786.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421); contains InterPro domain 1-aminocyclopropane-1-carboxylate synthase; (InterPro:IPR001176); contains InterPro domain Tyrosine/nicotianamine aminotransferase; (InterPro:IPR005 Range:  from: 14250340    to: 14252381    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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