Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                   <-                                                                                                 ----                                                                                          <------MYB46(1)                                                                                          <------MYB83                                                                                         --------->MYB111(1)                                                                                         <---------MYB46(3)                                                                                         <---------DEAR3(1)                                                                                         <---------AtMYB61                                                                                         --------->MYB46(2)                                                                                         --------->MYB55(2)                                                                   <---------ANAC58      --------->MYB111(2)                                                                   <---------ANAC58     <--------P --                                                                <---------TOE2(3)       <---------MYB55(1)                                                                <---------TOE1(3)      <-------GAMYB-                 <---------TOE2(3)                     <---------AHL20(2)             <---------MYB46(3) --TOE1(3)       <---------TOE1(3)                    --------->AHL20(1)              --------->MYB55(2) ---GT1        <---------AHL20(2)                     <---------AHL20(1)             <---------TOE2(3) ----ANAC81<----------DOF2     <---------MYB52(1)  --------->AHL20(2)              <-----------RAV1(1)   tctgctagtctgtctttttaatgttatattctcgtttgctattcaatcttcgtttatatatttgctaaggcttatccatcttattttgtggttggtgttt  14189700                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        <---------MYB59                       <---------ANAC55(2)                                                    =======                       --------->ANAC55(2)                                         ---------->DOF2  <---------YAB1     <-----------GT1                                               ================== ---------ICU4    <---------AHL20(2)                                          ----------->GT1 ------- --------YAB1     <---------ICU4                                            <---------ANAC58  <------ ----->YAB1      --------->AHL20(2)     <---------ARR11(3)                  <---------AtLEC2  ------- ------->ICU4  ------->TEIL <---------WOX13(1)     --------->LBD16          <---------ANAC46  ------- -------->ATHB12 --------->ICU4         --------->ARR11(3)                  <---------ANAC58<--------   catgattacagtctatgtatttattacctgattgtttatggagaacttgttcccccataaatgagtccctgttcgattgcatgttaaaagacatccacgt  14189800                                                            <---------AHL20(2)                                                           <---------AHL20(2)                                                           --------->AHL20(2)    <---------AHL20(2)                                  <--------ATHB1 =========================bZIP_DOF                      --------->ATHB12 ===bZIP_DOF                                           <---------YAB1 -->O2                <---------ANAC46                 <---------ATHB12                         ----- ---O2          --------->DAG2                    --------->ANAC58                     --------->TGA1a -->ANAC46     ---------->DOF2                    --------->ANAC58                     <---------O2 -->TGA1a   --------->YAB1                        --------->ANAC46                     <---------TGA1a -ALFIN1   <---------YAB1          ----------->RAV1(1) --------->ICU4                  --------->O2   ctatattttatatatcataaagttgtgtctatttggacaacaaaatttggacacacaatgatttattttggacatgagaaaacttactcacatgtctaat  14189900                                   -------->P                                 --------->AtMYB61                             <------NtERF2                            ------>NtERF2                 ------>MYB83                          --------->ATERF1(1)             -------->P                         <---------ATERF1(1)              ------>MYB46(1)                         <-----------HVH21               <---------ALFIN1                        --------->bZIP60(1)             <---------ALFIN1                        <---------bZIP60(1)          --------->ANAC46                        ====================MYC_MYB  --------->ANAC58                        <---------TGA1a              --------->ANAC58                        <---------bZIP60(2)      --------->AtMYB61                        --------->bZIP60(2)      <---------ALFIN1                        ====================MYC_MYB--------->ANAC46                        <---------DEAR3(1)      --------->ANAC46                   <---------TOE2(3)                     --------->ANAC46         --------->ANAC46                     xxxxxxxxxxxxxxxxxx    <---------AHL20(2)  <---------O2          <---------ALFIN1              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->AHL20(2)  --------->O2          --------->AtMYB61           ---------->DOF2    <---------AHL20(1)  --------->TGA1a      --------->MYB46(3)       ----------->HVH21 ---->ICU4     <------ZmHOX2a(1)<---------MYB52(2) <---------ALFIN1   <----------ID1              ---   ttttaaaaaattttgtaggactcacgacgtcgccactaacccatctcaccaccacaccccaacctcttcaatgtgacaaagtattagggttcccattcta  14190000       ---------->DOF2    ------>ZmHOX2a(2)                    --------------->AtSPL8   <------ZmHOX2a(2)               ------>ZmHOX2a(2)  --------->ARR11(3)        --------->YAB1  <---------ARR11(3)     --------->TOE2(3)        <----------DOF2 xxxxx>smallRNA(fl3)   ----------------->AGL3<---------ZAT18                  ---------->DOF2       - ------>YAB1           <---------YAB1 <----------DOF2              ----------->GT1 *TSS      <-------   tcacgatctcaaagttacaaaaattttcattaatagatcgctatttgtacacctttagtactatccgaatcgataatccaaaatgcccaaaatcgtctgc  14190100                                    ------>MYB46(1)                                    -------->P                                    ------>MYB83                                    --------->MYB52(1)                                  <---------MYB59                                  <---------MYB55(2)                                  <---------MYB111(2)                                  <---------MYB46(2)                                  --------->MYB46(3)                                              ---                          --------->MYB52(1)       <---------ANAC58                             -----                        --------->MYB46(3)         <---------ANAC58                             -----                       --------->ANAC58            --------->ETT(2)                             <----                       --------->ANAC58--------->ANAC46                                      <-------              --------->MYB46(3)  --------->DEAR3(1)           <---------ZAT18              <--------            <-----------GT1       <---------MYB111(1)          --------->ZAT18        <---------ATHB12            <---------ARR14(2)   <---------At4g35610------>NtERF2        --------------->AGL15 <-----            ------->TEILxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------ALFIN1<---------------AGL15<-----  --------->DAG2   --------->ANAC46--------->MYB55(1)--------->ATERF1(1)----------------->AGL1 ------ --------->DOF2<---------ALFIN1  --------->At4g35610<---------ATERF1(1) <-----------------AGL1------- --DEAR3(1) --------->ARR14(2)  ------>NtERF2      <---------ETT(2)    ------->TEIL --------->GLK1(1)   gaaaaaggcaaatgtatccaccctcaaccaatggcacctaccagacatttctggcgacccccaagtgcccttgcacctattaggggaaatcaatttgccg  14190200          --------->WRKY18(1)      <---------ALFIN1    ------>ZmHOX2a(1) ------>SPL7 ---->ORA47(1) ->NtERF2<-----------HVH21 -----RAP2.6(3)                           ----------->GT1                                         <-- --At5g28300                      -------->P                                                      --- ---GT1------>ZmHOX2a(1)          ------>MYB83 <-----------GT1                        <---------TOE2(3) ----ANAC58                       ------>MYB46(1)                                     --------->MYB59 ----ANAC58        <---------MYB46(3)     --------->ICU4                              <---------TOE1(3) --->DEAR3(1)     <---------AtMYB61  --------->ANAC46                     --------->MYB46(3)   ------ -------->AtSPL3<----------DOF2 --------->AtMYB61        <---------ICU4 --------->WOX13(1)  <--------   tccatcctcctcgtcaagctttggttcaattccacctacaggtaatgtttaactactaatctttgctatctgaacaatcacccgaatttaggtttaacat  14190300                                                           ----------->GT1                                                           --------->At4g35610                                                        <---------At4g35610                                                    --------->ANAC55(1)                                                    <---------ANAC55(2)     --------->AHL20(1)                             --------->ANAC55(2)    <---------AHL20(2)                              <---------O2                        <---------DEAR3(1)    --------->AHL20(2)                   <-------MYC3   --------->At4g35610            <---------ORA47(1)    --------->ATHB51              <---------GLK1(1) --------->ANAC58                  <------ZmHOX2a(1)   --------->ICU4                 --------->GLK1(1) --------->ANAC46                 ----------->HVH21 -------HSFB2a(2)     ------>ZmHOX2a(1)  ------->MYC3   --------->ZAT2             <---------At4g35610 ------>HSFB2a(2)  <---------ATERF1(1)   ------->MYC2   <---------ZAT2             --------->At4g35610 --->ARR11(3)   --------->At4g35610      <-------MYC2  ------->TEIL     <---------At4g35610 ---GT1 <---------AHL20(2)<---------MYB52(1)        --------->ANAC58    --------->At4g35610--------->ALFIN1   ctggaattattttatatcagcctcctccgttctctgatttccacatgcctgaacacgtagctgctaaaatagtaagcttagtttcagaggacggtgttga  14190400                                                     --------->LBD16                       <------ZmHOX2a(1)  <----------DOF2                    <---------ICU4      <---------At4g35610                    --------->YAB1      --------->At4g35610              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->LBD16        <---------ANAC58          ---------->DOF2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        <---------ANAC58    --------->At4g35610     <---------LBD16        <---------ANAC46  <-----------RAV1(2)      <---------LBD16   ---------->DOF2 <---------ATHB12 <---------ARR14(2)                                  <---------ANAC46 <<<<<<<<<MYB98  --------->WOX13(1) --------->ARR14(2)        <----------DOF2         --------->ZAT18   tatgttaaaggcttggattcaatcaggaccagatggcaaagccgctgttttttccagggaaactctttcttctgttcgactagataagtcccctgtattc  14190500                                                                                                  xxx                                                                                           <---------ZAT6                                                                                           <---------                                                                                         <---------ANAC46                                                                                       <---------ZAT14                                                                               <----------DOF2   <---                                                                            --------->ARR11(3)   <---                                                     --------->TOE1(3)      <---------ARR11(3)   <---           <---------YAB1                            --------->TOE2(3)     <---------CCA1(2)    <----  <---------O2------->TEIL              --------->ANAC46             <---------ZAT18   --------->ZAT14   attcacatggctcatgaatcttctagttatcacatgttttacacaaaatgcctagccttaaaaaatccctatgcactatatctttagagtttagtgttgg  14190600  Previous    Next  AGI:  At5g36070.1    Description:  transposable element gene. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G35080.1) Range:  from: 14190083    to: 14190965    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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