Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      ------>ZmHOX2a(1)               --------->YAB1             <-----------GT1                  --------->ANAC46         --------->ARR11(3)                 ------>ZmHOX2a(1)         <---------ARR11(3)           <---------ARR11(3)         <---------AHL20(1)           <---------ARR14(2)         --------->AHL20(2)           --------->ARR11(3)         --------->AHL20(1)           --------->ARR14(2)              --------->REM1(1) >ANAC46 <---------AHL20(2)          <---------CCA1(2)              <-----------GT1 -GT1   --------->AHL20(2)        --------->HSFB2a(2)            ----------->GT1               <-----   ttgtctgaaaatatattacctcctacatggacatttctagtatctcctacacaagtataatctcatatagttacaacacaactatttgagcaaatgttta  14144800                                                           --------->TOE1(3)                                 --------->YAB1         <-----------GT1                  --------->WOX13(1)                                <-------TEIL        --------->AHL20(2)            <-----------GT1                               --------->AtLEC2     <---------AHL20(2)       --------->AHL20(2)                            ------>MYB83           --------->AHL20(2)      --------->TOE2(3)      <--                            ------>MYB46(1)      --------->YAB1            <----------DOF2  ---------        <-------TEIL        -------->P         <---------YAB1        --------->ZAT6<---------At5g28300 ------GT1               --------->MYB46(3)<----------DOF2 --------->TOE2(3) <---------AHL20(2)   ---   ctattttggattcatatagttcttaaaaccaacatgcataatattctttattaataaataaccttcaaataacacaactttaatttacagtcaattagaa  14144900     --------->ATHB12    <---------YAB1                                                                           <-------    --------->ICU4                                                               <---------At4g35610 -------ZAT6                                                                     --------->At4g35610 >YAB1 <---------WOX13(1)                      <---------ALFIN1     <---------ATHB12     <---------REM1(1) ------>ALFIN1                 <---------TOE2(3)               ------>ZmHOX2a(2)<---------TOE1(3)   gtgttgatgattgatttttagagattagacattcaggtatcaaattcaaacacctctctaactgatccaaatgatcaaatttaagctaaaattgtagcta  14145000                                                                                                 <---                                                                                                 ----                                                  <---------ARR11(3)                     ----------->GT1                                                 --------->REM1(1)                     ---------->DOF2                 ----------->RAV1(1)        --------->ANAC58                          <------ZmHOX2a(1)              --------->ANAC58              --------->ANAC46                     --------->YAB1  ----              --------->ANAC46      --------->AHL20(2)                         --------->AHL20(2)<---   ----------->GT1     <---------MYB46(3)   --------->ANAC58            <---------ANAC58<------------ --At4g35610  --------->ANAC58 ----------->GT1 ----------->RAV1(1)      <---------ANAC58-------------   ctgatcagaaaaatagaagcaacatttgttgaatagaaaaaaatagaagcaacatctgttttaaaaaacacattgcttcaaaataataggaaagtacaaa  14145100                               <---------AHL20(2)                               --------->AHL20(2)                           <---------AHL20(2)                           --------->AHL20(2)                          --------->AHL20(2)                          <---------AHL20(2)                       <---------AHL20(2)                      --------->AHL20(2)                                       <---------AHL20(2)                     <---------AHL20(2) <---------CCA1(1)                   --------->YAB1                 <---------CCA1(1)      <---------RVE1(1)            --------->YAB1        <-----------GT1--------->AHL20(2)               <---------YAB1    --------->AHL20(2)       <- ------ARR11(3)  <---------RVE1(1)     <---------ARR11(3)       ------------>CBF  XXXXXXXXXXXXXXXXXXX ----->AHL20(1) --------->AHL20(1)     --------->AHL20(1)   <---------ICU4--------->AHL20(1)       -- ----->AHL20(2) <---------ARR11(3)     --------->ARR11(3)   <---------AHL20(2) --------->AHL20(2)  -- ------AHL20(1) <---------AHL20(1)     <---------AHL20(1)--------->YAB1  --------->YAB1           --- ---AtSPL8      --------->ARR11(3) ---------->DOF2    --------->YAB1 --------->AHL20(2)      -------- -->AtSPL8  ---------->DOF2--------->AHL20(1)        <---------YAB1 <---------ATHB12  --------->LBD16   atattagatttaactaaagatattttaaattaattaaaaaagatatttggattatatgataataaatccaataaaaaataataaaatccagaatacagaa  14145200                <---------At4g35610 <------------CBF --------AHL20(2)            <----------ID1 XX>MIR850     ------------------------>ANAC81                        --------->YAB1 ------->AHL20(1)         ---------->DOF2                             <---------ICU4             ---- ------->AHL20(2)      >>>>>>>>>TBF1                        --------->ANAC58              ----------- ------>AHL20(2)--------->At4g35610       <------ZmHOX2a(1) --------->ANAC58        ------>ZmHOX2a(1) --->GT1      *TSS --------->At4g35610 <-----------RAV1(2)  --------->ANAC46       --------->TOE2(3)   aaaaattgcaagaggggaagcagaagaagaaagaacaaaaatcaggagttggcattttgaagacgaaactcatcatcatcttcttcctcagacaacaaaa  14145300                                                                                           --------->HSFC1(2)                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                             --------->DOF5.7(2)      <------NtERF2<-                                                             <---------MYB52(1)     <---------DEAR3(1)         <---------DAG2                                    <---------MYB46(3)      <---------At4g35610      <-----------GT1                  ---------->DOF2    <------NtERF2    <---------ALFIN1--------->HSFB2a(1)  <----------DOF2                    --------->HSFB2a(2) ------>NtERF2     --------->REM1(1)      <-- ------>DOF2     <---------ALFIN1    <---------HSFB2a(2) <---------RAP2.6(3)   --------->ALFIN1   --- >RAV1(1)<----------DOF2          ------>ZmHOX2a(1)<----------DOF2       ------>ZmHOX2a(1)--------->GLK1(2)   aaagcttttcactttctctccacccttctctctctccttctgaaagtctctctctttgccgtcgttagcctcttcctacacttggggctgcgattcttcc  14145400                                                                             --------->At5g28300                                                                             --------->LBD16                                                                            ----------->GT1                                                                      ----------->HVH21                                                                   <---------MYB46(3)                                                                <------MYB83<---------ANAC46                                                               <---------AtMYB61                                                              <---------MYB52(1)                                                             <-------GAMYB <------NtERF2  ------>ZmHOX2a(1)                                         <---------MYB46(3) --------->TOE1(2)                                          <-----------RAV1(1) --------->TOE2(2)          --------->YAB1                --------->ABI4(2)--------->RAP2.3(1) --------ATHB12            <---------ATHB12          <---------At5g28300  ------>NtERF2    <--------- -------ARR14(2)         --------->WOX13(1)      <----------DOF2<------MYB46(1)         <------ZmHOX2a(2) ------>ARR14(2)     ------>ZmHOX2a(1)  <---------ATHB12 --------->ALFIN1--------->ANAC46  ------>ZmHOX2a(1)   aatcctccgatttcaatttcatcctctcaatcatagtttgaaatcatcgagcttttacggtgctgttggtgtttgacgccgtaaaattcgatcctttttt  14145500                                                                   <---------TGA1a                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                 ------>NtERF2                                                                --------->WRKY12                                                                --------->WRKY38(1)                                                                ----------->HVH21                                                               <------NtERF2    <---------WOX13(1)                                                               <----------CDC5--------->ATHB12                                                              <---------At4g35610                                                              --------->At4g35610                                              <---------TOE1(3)--------->ATERF1(1)               <---------AHL20(2)  <------ZmHOX2a(2)<---------ANAC46         <---------YAB1 -DOF2<---------TOE2(3)     <---------ANAC46  <---------TOE2(3)==============MYC_MYB              <--   atacatttgatgttgattttatcgatagttttgtgagatcgattttttagggtttcgagtttggcgctgacttgagggtttgattggatgagaataaggg  14145600                                                              <----------DOF2      <---------MYB52(1)                                                            <----------DOF2     <-------TEIL                                                          --------->At4g35610 <---------ARR14(2)                                                          <---------At4g35610 <---------GLK1(2)                                  <---------ATHB12        <---------ZAT2      --------->ARR14(2)                         ---------->ID1         ------>ZmHOX2a(1)            <------ZmHOX2a(1)                   <---------ANAC58--------->YAB1  --------->GLK1(1)        <---------YAB1         <- -------ARR14(2)   <---------ANAC58<---------ICU4  <---------GLK1(1)     --------->ICU4          <---   gttatgggacttgagtcaattgggtttgtctccctaatcatcgcaaattcctgatttctcagctctttggaaggaattaggattcgttgatttcgagttt  14145700  Previous    Next  AGI:  At5g35980.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G40120.1); similar to Os02g0702500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047851.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ64205.1); similar to Os04g0602800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053776.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, activ Range:  from: 14145214    to: 14153554    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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