Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->At4g35610                                                       ------>NtERF2                                                      <---------DEAR3(1)                                                   --------->ANAC46                                                 ---------->DOF2                                                 <---------DOF5.7(2)                                            <------NtERF2                                           ------>NtERF2                                           <---------RAP2.6(3)                                          --------->RRTF1(2)                                          --------->RAP2.3(2)                                          --------->RRTF1(3)                                          --------->RAP2.3(3)                                          >>>>>>>>>AtERF-1                                          --------->RAP2.6(2)                                          --------->ATERF1(2)                                          --------->ANAC58                                          --------->ANAC46                                          --------->ANAC58                                          --------->DEAR3(1)                                          --------->DREB2C(2)                                          >>>>>>>>>AtERF-7                                          >>>>>>>>>AtERF-4                                          >>>>>>>>>AtERF-3                    <------NtERF2                                          >>>>>>>>>AtERF-2                   --------->HSFB2a(2)                                          >>>>>>>>>AtERF-5                   <---------HSFB2a(2)                                         --------->RAP2.3(1)               <------NtERF2                                         --------->ORA47(2)              --------->ANAC46                                         --------->ATERF1(1)           <---------ANAC58                                         --------->DEAR3(2)            <---------ANAC58                                         <------NtERF2--------->DEAR3(1)--------->LBD16              <---------ANAC58           --------->RRTF1(1)           <---------LBD16              <---------ANAC58           --------->ERF1<---------At4g35610<-----------HVH21      <---------DAG2                    <---------RAP2.3(1)           <-----------------AGL1     ----      <----------DOF2                   --------->At4g35610           ----------------->AGL1  ------>NtERF2  <---------MYB52(1)                    <---------At4g35610          ------>MYB46(1)     <---------GLK1(1) ---------->GT1                  --------->ZAT6--------->DOF5.7(2)   ------>MYB83     --------->ANAC58 -------DOF5.7(2)  <---------ANAC58     <---------ATERF1(1)      --------->ARR11(3)   --------->ANAC46 ------ARR14(2)    <---------ANAC58    --------->ARR14(2)        <---------ARR11(3)   --------->ANAC58 ----->ARR14(2)    <---------ANAC46    <---------ARR14(2)    ---------->DOF2<---------ANAC46 <-------   aaacgttacttttccttcgtggcttcttcttagtaacactggagccgccattaacgccgctgcaaaagaccttccgcgtcgggaaaacacgaactccgac  14140200                                                 --------->LBD16                                                --------->DEAR3(1)                                              ------>NtERF2                                             <---------DEAR3(1)                                             --------->DEAR3(1)                                            --------->ATERF1(1)                                            <------NtERF2                                           ------>NtERF2                                           <---------ATERF1(1)                                          --------->RAP2.3(2)                                          --------->DEAR3(1)                                          --------->O2                                          <---------O2                                         --------->RAP2.3(1)                                         --------->ATERF1(1)                                         --------->ERF1                                         <------NtERF2                                         --------->RRTF1(1)                                        --------->ABI4(1)                                        ------>NtERF2                                       --------->RRTF1(3)                                       --------->RAP2.3(3)                                       --------->RAP2.3(2)                                       <---------DEAR3(1)                                       --------->DEAR3(1)                                      --------->DEAR4(2)                                      --------->ERF1                                      --------->ORA47(2)                                      --------->RAP2.3(1)                                    --------->ANAC46                            <---------DOF5.7(2)<------NtERF2                          ----------->HVH21<-----------HVH21                        <---------ANAC46<---------ATERF1(1)           --------->ARR14(2)                    <-------GAMYB   --------->ANAC58                  <---------ARR14(2)                    <-----------HVH21 --------->RRTF1(1)        --------->ARR14(2)                   <---------DEAR3(2) --------->ATERF1(1)       --------->GLK1(2)                   <---------MYB46(3)<---------ATERF1(1)        <---------ARR14(2)            <------                  <---------DEAR3(1)--------->ANAC58        --------->ANAC46                  -------              <---------At5g28300 <---------DOF5.7(2)    <---------WRKY38(1)                  <------ ------->RAV1(1)------->GAMYB------->TEIL--------->DEAR4(2)<---------LBD16       --------->ANAC46 --ETT(1)    --------->MYB52(1) --------->DOF5.7(2)      --------->ETT(2)      --------->ANAC46  ----   aacacaaacgtagtttaacggcggtcgagtgaacgtgaacgccgccgtcgccgtagtagtcgacggaatccgaatacttctacacaaaaaacttgaagct  14140300                                                              --------->ANAC58                                                          --------->ANAC58                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                   --------->LBD16                                                  --------->LBD16                                              --------->GLK1(1)                                             <---------ARR14(2)                                             <---------GLK1(2)--------->ANAC58            <-----------GT1                  --------->ARR14(2)        --------->ARR11(3)                  <---------At4g35610<---------STY1(2)             -------- ---ZAT2<---------GLK1(2)             <---------HSFC1(2)  --------->ANAC46                  --------- -->At4g35610                         --------->HSFC1(2)  --------->ANAC58                  <-------- ---At4g35610                     ----------->GT1<---------HSFB2a(2)---------->DOF2        <---------LBD16 ----->At4g35610               ---------->DOF2<---------GLK1(1)--------->STY1(2)  ----------->HVH21--   gcttccatcagatttttcccagcgattcaacacaaaaggaaacttcagattcccgagaaaacgcaagctagaaagtggaatctagtgacattttctggga  14140400    ----------->GT1                                         ----------->GT1 ---------->DOF2                             <---------AHL20(2)                        --------->CCA1(2) ->LBD16                        <---------ANAC46--------->ARR11(3)      <---------CCA1(1) >HSFB2a(2)                     <---------ANAC58<---------AHL20(1)      <---------RVE1(1)      <----- -HSFB2a(2)                     <---------ANAC58--------->AHL20(1)     <---------ARR11(3)      ------ ------->YAB1            ---------->DOF2     --------->AHL20(2)        --------->ARR11(3)   ------->TEIL   atcaaaaggaaaatatacagagaaattgaaagtctcgtgtaacttatttatatattggagaaaggttttttcagatatttgagtttgagagacgaattta  14140500                                                     --------------->AGL15                                                     <---------------AGL15                                           <---------YAB1                                         <---------AHL20(2)       --------->LBD16<---------TOE2(3) <---------YAB1      --------->RAP2.6(2)           <---------AHL20(1)      --------->RAP2.3(2)           <---------ARR11(3)                                             --   --------->ANAC46   <---------TOE1(3)<---------AHL20(2)                                  <--------- ----AHL20(2) --------->AHL20(2)    --------->ARR11(3)                *TSS            <---------DAG2 --->AHL20(2) <---------AHL20(2)    --------->AHL20(1)                ------->TEIL    <----------DOF2   aatctaagccgcaaaattaaacttgaggttctcagaaatatttttatttttgtttcattttttggtgaaacgaattttgtttttgagactttatgtcaca  14140600                                                                                     <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                               <---------ANAC55(2)                                                                               --------->ANAC55(2)                                                                               ======================                                                                               <---------ANAC55(1)                                                                               --------->O2                                                                               --------->TGA1a                                                                               <---------TGA1a                                                                               <---------bZIP60(2)                                                                              ----------->STF1                                                                            ----------->TGA1                                                                            ----------->HVH21                                                                           <-----------HVH21                                                                          <---------At4g35610                             ------>ZmHOX2a(2)                            <------MYB46(1)                            <------ZmHOX2a(2)                             <------MYB83                           --------->ARR11(3)                             <---------ZAT2  <---------At5g28300                           <---------ARR11(3)               <---------GLK1(2)<---------TGA2(2)                     <---------YAB1            <---------WOX13(1)         --------->At4g35610                  --------->ICU4              <------------CBF  <----------DOF2<---------O2                <---------ANAC58             --------->ATHB12   =========================bZIP_DOF ------->YAB1   <---------ANAC46            <---------YAB1--------->ICU4  --------->ZAT2 <-----------GT1 --HVH21        <---------ANAC58   <---------ZAT14      <------------CBF<-----------RAV1(2)      ----   aacatagcacagagagagtcgtgatgagagatcgtagtggagagttgtgattggctagtattgattctttgtgggcaggtgacgtgtttaattactgtcc  14140700                <-------GAMYB               --------->MYB52(2)       <---------AHL20(2)  ------>ZmHOX2a(1)                                                                           ------- --------->TOE1(3)                                                                           ------>ZmHOX2a(2) --------->TOE2(3)                                     <---------GLK1(1)                   <---------ARR14(2) =======================MYC_MYB                  <----------DOF2                           --------->ARR14(2) -->ZmHOX2a(1) <---------MYB46(3)         <---------GLK1(2) <----------DOF2         ------>ZmHOX2a(2)   tatccttatatttttgtttgttgacttatacccctgtatttttagattcttctttggagaccctttaagttggattttagaattgatcgaatggatcggt  14140800                                            ---------->DOF2                      --------->TOE1(3)                                  --------->REM1(1)                              --------->TOE2(3)                             --------->ANAC58                              <-----------GT1                             --------->ANAC46                     --------->ANAC55(1)               <               ------>ZmHOX2a(2) <-------TEIL                     --------->ANAC58                  <    ------->TEIL         <-----------GT1 --------->YAB1           --------->ANAC46                  < ---->GT1<---------At4g35610 --------->ANAC58                     --------->ANAC58            -------   agaatgcatccaactgatctgtggattttacaagctacatcattcatatagcacatttgaaatactacacgaaattttttcgaccttaattttgaactaa  14140900                                                                        <---------CCA1(2)                                                                   xxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                          <---------ICU4<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         <---------ATHB12      ------>ZmHOX2a(1)                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  xxxxxxx                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    xxxxxxx                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    ------>ZmHOX2a(2)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    xxxxxxx                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <------ZmHOX2a(2)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     ---------              --------->AHL20(2)                 <---------ATHB12<---------CCA1(2)          <--------          <---------AHL20(2)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <--------         <---------YAB1                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         ---------      <---------YAB1                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         --------- ---------YAB1<---------AHL20(2)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <-------- ---------TOE1(3) --------->ARR11(3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     --------->MYB52(1) ---------TOE2(3) <---------ARR11(3)      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  =====================HOX2a_HOX2a -->ICU4<---------AHL20(2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     ======================HOX2a_HOX2a   ttaagattatttttatttaaaatctcacaaaaatttagtttaaaaaaaacaatcgttccatcattctctatcttctatctcctctaaaaaaacagatcta  14141000                                                      <------MYB83                                                      <------MYB46(1)                                                      <---------MYB46(3)                                                     --------->MYB111(1)                                                     <---------AtMYB61                                                     --------->MYB111(2)                                                     --------->MYB46(2)                                                     <---------MYB46(3)                                                     --------->ALFIN1                                                     --------->MYB55(2)                                                     <---------DEAR3(1)                                                    <---------MYB55(1)                                                    <--------P xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                <-------GAMYB xxxxxxxxxxxxxxxx>smallRNA(si3)                   <------MYB83 xxxxxxxxx>smallRNA(i)                            <------MYB46(1) xxxxxxxxxxxxxxxx>smallRNA(le3)              <---------MYB46(3) >AGP1                                       --------->MYB52(2) -AGP1                                     <---------MYB52(1) -ARR14(2)                     <----------DOF2    <---------ANAC46                xxxxxxxxxxxxxxxx>smallRNA(s) >ARR14(2)               ---------->DOF2 --------->ETT(2)                <---------DAG2--------->YAB1 >ARR11(3)           <---------AtLEC2    <---------ETT(2)                <----------DOF2          xxx -ARR11(3)     <---------MYB52(1) <---------YAB1 --------->MYB59  --------->CCA1(2)   <------ZmHOX2a(2)   tgagtttagttttcgccgtttttgcattaaagtcttttcattgtcgatagttgggttggtggacgaagataaacgcttttcttctccgatcatatgatga  14141100  Previous    Next  AGI:  At5g35970.1    Description:  DNA-binding protein, putative. similar to DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT2G03270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62050.1); similar to hypothetical protein OsI_029429 [Oryza sativa (indica cultivar-group)] (GB:EAZ08197.1); similar to hypothetical protein OsJ_027309 [Oryza sativa (japonica cultivar-group)] (GB:EAZ43826.1); contains InterPro domain DEAD-like helicase, N-terminal (InterPro:IPR014001) Range:  from: 14136106    to: 14140570    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version