Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->ATHB12                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(1)                                                                  --------->AHL20(2) --------->AHL20(1)                                                                --------->ANAC58  <--------ATHB1                                                                --------->ANAC58  --------->ATHB51                                  --------->AHL20(2)            ----------->GT1   <---------AHL20(2)                                  <---------AHL20(2)       <---------ARR14(2)     --------->AHL20(2)                                 --------->AHL20(2)     --------->ANAC46          <---------ICU4                              <---------YAB1           ------->MYC3              --------->ICU4                         ----------->GT1               <-------MYC3  --------->AHL20(2) ---------ANAC58      <-----------RAV1(1)              <---------LBD16       --------->AHL20(2) ---------ANAC58     <---------TOE2(3)      <------NtERF2--------->LBD16   ----------->GT1 -AtLEC2      ---------->DOF2--------->AHL20(2)       --------->ANAC46 --------->YAB1<---------AHL20(2)   tatcgtgagaccatagaaaagtttatgttgttaaaattaatatggcatcgtctaacacgcggaaacaagaaaataataagttaataatttattgcatcgt  14107700                                                <---------AHL20(2)                                          --------->AHL20(2)                                --------->ICU4 <---------AHL20(1)                                <---------YAB1<---------AHL20(2)                    --------->YAB1     --------->YAB1                   <---------YAB1     --------->ICU4                                               <-                  --------->AHL20(2)  <---------YAB1                                               --                  --------->AHL20(1)<---------ICU4                                                <--                <---------AHL20(1) <---------YAB1                              <-----------GT1    ---                --------->AHL20(1) --------->ICU4                           --------->YAB1        ---               --------->YAB1 <------ZmHOX2a(1)--------->AHL20(1)         --------->AHL20(2) <-------            XXXXXXXXXXXXXXXXXXXX>MIR400<---------ICU4              --------->ANAC58       <---------HSFB2a(2)        --------->ZAT18     --------->MYB59<---------AHL20(2)      --------->ANAC58       --------->HSFB2a(2)       <------ZmHOX2a(1)  <<<<<<<<<MYB98 <---------YAB1            --------->ANAC46  <----------DOF2   ctaccacgaggacacaaaaatattataagttaggatgattattattatatatatttgcctcgtttgtacaagtcatattaataacttcttttctagataa  14107800         --------->AHL20(2)         <---------AHL20(2)   <---------AHL20(2)                                                    <------------CBF   --------->AHL20(2)                                     --------->ANAC46 --------AHL20(2)                                    <---------ICU4   ------------>CBF ------->AHL20(2)                                 --------->ANAC46  ----------------->AGL1    <------ -------AHL20(2)           <------ZmHOX2a(1)    <-----------GT1 <------------CBF            <-------- ------>YAB1           ---------->DOF2       <---------YAB1  <---------ALFIN1              ------>ZmHOX2a(1) ------>AHL20(2) <---------ANAC46        <---------MYB59  --------->ANAC58          --------->At4g35610 --ARR11(3)<---------AHL20(2)          --------->MYB52(1) --------->ANAC58        <---------ICU4   ttaaaataaatataaatttgtgtataaaaggacaccttcactacctgattatacatcatcactccacattgccacaattgttcatcatctctccttatct  14107900                                                                                             --------       --------->At4g35610                                                                   <-------       <---------At4g35610                                                                  <--------      ----------->RAV1(1)                                                                   ---------    --------->ZAT14                                                     <---------DAG2      <--------    <---------ZAT14                                            --------->ARR11(3)     --------->ZAT18 ---CCA1(2)           ----------->GT1                 <----------DOF2   <----------DOF2 ------------>CBF -CCA1(2)      ----------->GT1         --------->At4g35610   <---------ATHB12        --------->ALFIN1   ctctactgcagcataagaggtaaatggttataacttatagtagctaaaactgtttactttcaaatgattttgaactttttttatcaagtgggcaatgatt  14108000                                              <-------TEIL                                    <-------TEIL --------->ANAC46                                   --------->ARR14(1)                     --------->DAG2   <-----------GT1                --------->ARR11(1)                    ---------->DOF2  --------->AHL20(1)              <---------GLK1(2)                 --------->ANAC58 ->ATHB12                         <---------ARR14(2)                --------->ANAC58 -ATHB1                           --------->ARR14(2)   ----------------->AGL1 -YAB1 --------->ZAT14    --------->ARR11(3)  --------->ZAT18     <---------DOF5.7(2)     ---------->DOF2 >ICU4 <---------ZAT14    <---------ARR11(3)  --------->ZAT14    <---------WRKY38(1)  <---------ANAC46 -ATHB12             ------------>CBF     <---------ICU4   --------->MYB52(1)--------->ALFIN1   caaatatactatactgactaagaaacaatatctctagattcgaataagtacacgatggccctaatggtgaacgctaaaggtggaaatggagggaaagaat  14108100                                                                                            <------MYB83              <---------ICU4                <---------ZAT2                                  <------MYB46(1)             --------->ICU4 ---------->DOF2 --------->ZAT2                                  ---------  <XXXXXXXXXXXXXXXXXXXXMIR842     <-------TEIL                                            <--------P  --------->ATHB12    ----------->GT1       <---------At4g35610                        <---------TOE1(3) ----------->HVH21    --------->ALFIN1<-----------HVH21                                <---------TOE2(3) --------->ICU4 <---------YAB1   --------->CCA1(2)              <---------At4g35610<-----------HVH21   gggatgatgggtttgattatgagggtgtaacaaagatacatgtccgagctggttctgaaggcattcagttcatcaagtttgactatgtcaaggttggaaa  14108200                                                                           <---------ARR11(3)       <                                                                           --------->ARR11(3)     ---             ------>MYB83 <---------ANAC58                            --------->AHL20(2)          ---             ------>MYB46(1)                                        <----------DOF2               <--            --------->WOX13(1)                           <---------ANAC46 <---------CCA1(2)--------->ALFIN1      <---------WOX13(1)  <---------ANAC58   --------->MYB52(1)     <---------DAG2    <------ZmHOX2a(1) -->GT1    --------->AtMYB61          ----------->HVH21  <---------bZIP60(2) --------->TOE2(3)   <---   aactattgatggaccaatccatggtgtttctggccttggtatgacacaaacggtatgtgatgtgtcttaactttatatatcttaactaggaatgtggtag  14108300                                                                                              -------                                                                                              <------                                                                                        <---------AHL20(2)                                                                                   ------>ZmHOX2a(1)                                                                                  <---------MYB59                                                                                 ------>ZmHOX2a(2)            --------->DEAR3(1)                                                  <------ZmHOX2a(2)          <---------At4g35610                                                  --------->ARR14(2)   <---------MYB46(3)                                   <-----------GT1        --------->ARR11(3)   < ---------ANAC46                                       <-----------GT1         <---------ARR11(3)  <- ------>ZAT14                                       ------->TEIL     <---------TOE1(2) --------->AHL20(2) ------>ZAT18     <----------DOF2       <---------MYB46(3)           <---------TOE2(3) <---------AHL20(2) -------ZAT14 <------NtERF2 <---------ZAT6      <-------MYC3         <---------TOE1(3) <---------AHL20(1) ------ZAT6 --------->PCF2  ----------->HVH21   ------->MYC3 <---------DAG2    <---------ARR14(2)  --   tgtagtggttacagcccccgcttagaggcagtgatagagcattggttccacatgtattttccaatttttctaaggttttaagatcctaatttttttttta  14108400                                                                            <---------ZAT18                                                                            --------->ZAT18                                                                      --------->ATHB51                                                                      <--------ATHB1                                                                      --------->ATHB12                                                                      <---------ICU4                                                                      -------->HAHB4                                                                     --------->ICU4           ---------->DOF2                                           <---------YAB1    ----------->GT1                                                  <---------ATHB51 -->AHL20(2)                                                       --------->YAB1 ---AHL20(2)                                     ---------->DOF2 --------->AHL20(2) ---------YAB1                     --------->ZAT18              --------->YAB1 --------AHL20(1)             ---------->DOF2   ------>ZmHOX2a(1)--------->AHL20(1) ------->AHL20(1)        ----------->GT1 --------->AHL20(2)   --------->AHL20(2)     <-------TEIL   atatttttgtaaataaagtccaaatttttgttaaaagtgcaaaataaatcctaaagttttcagaaaaaataataattgggcactaggttcaaaacaaatt  14108500                                                                       --------->ALFIN1                                   <---------ANAC46                  <---------ANAC58                                   <---------ANAC58               --------->ALFIN1                                   <---------ANAC58      --------->TGA1a                              <---------MYB46(3)         <---------O2<---------ANAC46                              <------MYB46(1)            --------->O2<---------ANAC58    <---------TOE1(3)               <--------P     <------MYB83  ------>ZmHOX2a(1)    <------ZmHOX2a(1)       <---------TOE2(3)             <---------MYB46(3)   --------->MYB52(2)     <---------TGA1a     ---------->DOF2       <----------CDC5        <---------DEAR3(2)         ===============================bZIP_DOF    -   tgagttggccctgagtggttagcatttgaagttggttccttgtgtcctagttctatctcacttgggaggaggggtgttccaaagggagattaaggtctaa  14108600  Previous    Next  AGI:  At5g35940.1    Description:  jacalin lectin family protein. similar to jacalin lectin family protein [Arabidopsis thaliana] (TAIR:AT5G35950.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72271.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 14108055    to: 14110207    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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