Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------------AGL15                                        --------------->AGL15                                       ----------------->AGL1                                       >>>>>>>>>>>>>>>>>LFY                                       ----------------->AG                               <---------AHL20(2)                               --------->AHL20(2)                            ----------->GT1                           ----------->GT1                                                 --------->At4g35610                          <---------ARR11(3)                                               <---------At4g35610                    <-----------GT1    <-----------------AG                                ----------                --------->CCA1(2)      <-----------------AGL1                 --------->GLK1(2)               --------->ARR11(3)      ----------------->AGL2                <---------GLK1(2)    ---               <---------ARR11(3)    <-----------GT1               --------->TOE1(1)      ------->TEIL >DOF2     ---------->DOF2--------->ARR11(3)                       --------->TOE2(1) <----------DOF2   attagaagttttgtaaagatatatacaagatgttaaattatacccattgtggaatgtgtttagcataccttgtaccaaagaatctctctttgcatctgaa  14011400                                              ----------->RAV1(1)                                          ------->MYC2                                          <-------MYC2                                          ------->MYC3                                          <-------MYC3                                         <---------ANAC58                   <----------DOF2       ------>ZmHOX2a(1)                 <---------ANAC58               <---------GLK1(2)     ----------->RAV1(2)               <---------DOF5.7(2)           <---------TOE1(2)  <---------At4g35610             --------->ALFIN1                  <---------MYB52(1)              < ->RAV1(2)                     <---------AtMYB61                   <-------GAMYB  <----------DOF2   - ------>ALFIN1      <-----------GT1   <---------WRKY12<-------TEIL<---------MYB46(3)               <-   gtgctgctcctgatacaacttgtaacctatttggaggtggtaaacgtgccacaagatgcaacaagttgtcgttggattctttctctttatacatagctat  14011500                                              ----------->TGA1                                      <---------CCA1(1)                                      <---------RVE1(1)              --------->LBD16        <---------ARR11(3)             <------NtERF2           <---------GLK1(2)                                           ----           --------->PCF5            --------->ARR11(3)                                       <------    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)     <---------AtLEC2                   <---------AtMYB61-----   <----------DOF2                <---------TOE2(3)                          <----------DOF2 <------- ---------ARR11(1)        --------->GLK1(2) --------->YAB1                --------->ANAC58  --------- -------->ARR11(3)       <---------GLK1(2)<-----------GT1                 --------->ANAC58  ------>ZmHOX2a(2) --------CCA1(2)   <-------TEIL  ---------->DOF2 <---------YAB1    --------->ALFIN1     <---------YAB1   caaatctttgatggccccgagttcatagattctattaaagattttttcatgacgatttatagcagcaatgtggaacaagctttggttcttatgatccacc  14011600         --------->CCA1(2)        --------->ARR11(3)        <---------ARR11(3)        <---------AGP1        --------->AGP1                                      --------->ZAT18        <---------ARR14(2)                                  <---------ZAT18        --------->ARR14(2)                             <---------GLK1(2)       <---------CCA1(2)                           ----------------->AGL1   <-----------HVH21                            <---------GLK1(1) ----->ORA47(1)                                 --------->GLK1(1) ---At5g28300                                  --------->ARR11(3) ---->DEAR3(1)                       ---------->DOF2<---------HSFB2a(2)                   =========== --ALFIN1<------ZmHOX2a(2)--------->YAB1       <---------ARR11(3)   ---------->DOF2       ------>ZmHOX2a(2) >MYB46(3)------>ZmHOX2a(2)      <---------ANAC55(2)--------->HSFB2a(2)             <---------At4g35610   gtccatatcagatctggataagaacgaatgagaataagtaaaagctcaagatttccagattgtgcagcatcaaagagtagcattggagatgatcccacaa  14011700             <---------ALFIN1           ------>ZmHOX2a(1)                                                          --------->ANAC58           >>>>>>>>>>>>>>>>>LFY                                                       --------->ANAC58         <-----------------AGL1                                           <----------DOF2     --------->HSFC1(2)                                                 <------NtERF2 --------->ANAC55(2)     <---------HSFC1(2)--------->AHL20(2)                     --------->At4g35610<---------ANAC58  --     <---------HSFB2a(1)    <-----------GT1         --------->AtMYB61   --------->LBD16          <---     --------->HSFB2a(1)<---------AHL20(2)         --------->MYB46(3) <---------LBD16 --------->ANAC46 =================HOX2a_HOX2a                  ------>ZmHOX2a(1) ---------->DOF2 <---------ANAC58====   attgcgaaatttcctccactggcaattttataacaaaactccatagctcctctaccaccatatgagctaaagtccgcattttggcttcacgaaatacccc  14011800                              --------->ALFIN1                            --------->TGA1a                            <---------O2                            <---------TGA1a                            --------->O2                            <---------At4g35610                           >>>>>>>GRF7                          <-----------RAV1(2)                        <-----------HVH21                     <---------ANAC58                     <---------ANAC58             ---------->DOF2--------->At4g35610                                               ------- --------->TBP     --------->ARR11(3)                                              <-----------HVH21 -------DOF2 =========================bZIP_DOF                     --------->AHL20(2)         <------ =====================================bZIP_DOF<---------TOE2(3)    <---------AHL20(2)         <------   tttaaaaactaaatggaaagagttcttgtcaggtgtgatgttcaaacaaaggtttagactataggttatataattctcaaactttggtcacttctgagca  14011900                           <---------YAB1                     --------->AHL20(1)                     <---------AHL20(1)                    <---------AHL20(2)                                                         ------                  --------->AHL20(2)                                                        ---------                  <---------AHL20(2)                                              --------->MYB52(1)                  <-----------TBP                                                 ------>MYB83 ------                --------->AHL20(2)                                                ------>MYB46(1)     ------>ZmHOX2a(1)<---------AHL20(2)                                         --------->MYB55(1) -->ZAT14       <-----------TBP                             ------->TEIL        --------->MYB46(3) ---ZAT18       <---------AHL20(2)                        <---------ZAT18       <---------MYB46(2) ---ZAT14     <-----------TBP      ---------->DOF2        --------->ZAT18       <---------MYB59------   cttgttcctactacttatatatatatattttgatatgaaaagaatgagttaactaagaggtgtacttgtgagaaactcgttaccaaacgacctgttcacc  14012000 ----------->GT1 --->ANAC46         --------->TOE1(2) >ZAT14             --------->TOE2(2)                               <---------ANAC46             ---- --->ANAC58      <-----------GT1                       ---------->DOF2       <---------HSFB2a(1) ---- --->ANAC58   <---------YAB1              <-----------GT1          --------->MYB59             ------   ccaaggttaatttgatattatacctgtgagtttttggtctaaattcaccaagtatgagaaagactctattcggtatagagggttcgaagttcaaatgaaa  14012100                                                                                 --------->ZAT2                                                                                 <---------At4g35610                                                                          ------>ZmHOX2a(2)                                                                         <---------GLK1(1)                                                                         --------->GLK1(1)                                                                         <------ZmHOX2a(2)                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <---------ARR11(3)                       <-----------HVH21                                --------->ARR14(2)        --------->CCA1(2)   <----------DOF2                             <---------ARR14(2)     <----- --------->ANAC58  <---------LBD16             <----------ID1           --------->ARR11(3)     ------ --------->ANAC58<---------ARR14(2)      <----------DOF2                <---------ARR14(3)     ------ ----->ANAC58    --------->GLK1(2)       <---------DAG2                <---------GLK1(1)       <----- ----->ANAC58    --------->ARR14(2)  <-------TEIL                      --------->GLK1(1)  --------->YAB1 ---->DOF2--------->CCA1(2)<---------ANAC46    --------->ANAC46  ---------->DOF2 --------->At4g35610   agcaaggaagagataagagtttctgggtcgcttagagggttcactttatgcgccaagtttgagaaacaaaaggagatctcttcagctctctctcatgaca  14012200                                                              <------NtERF2                                                             ------>NtERF2                                                            --------->RAP2.6(2)                                                            --------->RAP2.3(3)                   ---                                                            --------->RAP2.3(2)                   <--                            --------->At4g35610             --------->DEAR3(1)                    ---           --------------->AtSPL3                        --------->ANAC46                         <--           --------------->AtSPL8                        --------->ANAC58                         --- <----------DOF2     ----------->RAV1(1)                 --------->ANAC58                --------->LBD16 ----bZIP60(1)    --------->ANAC46                     ---------->DOF2                  --------->ANAC55(2) --->TGA2(1)      --------->ANAC58                    <---------ATHB12                  <---------ANAC55(2) --->bZIP60(1)    --------->ANAC58                  --------->WOX13(1)                  --------->ANAC58 ----TGA2(1)    ---------->DOF2            ----------->GT1 --------->RAP2.3(1)          --------->ANAC58   tcactttgtcgagttcgtacaagcaacaagagcagacaacaagaatggtttcttcaatcaagccgcctaagagattgcagcaattcaggcccgtaattgc  14012300  Previous    Next  AGI:  At5g35810.1    Description:  similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT3G54070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68568.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41965.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 14010658    to: 14011779    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version