Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ------>MYB83                 -------->P                                  --------->CCA1(2)                 ------>MYB46(1)                            <---------ARR11(3)               <---------MYB59                              --------->ARR11(3)      --------->ANAC58                              --------->ICU4      --------->ANAC58      <---------ATHB12    <---------ZAT14                             ---------  --------->TOE2(3)    --------->YAB1           --------->ZAT18                            <---------ATHB12  --------->TOE1(3) --------->ANAC46            <---------ZAT18                       --------->TOE2(3) ------->P     <---------MYB46(2)               --------->ZAT14                     -------->P<------ ------MYB52(2)--------->AtMYB61       --------->ATHB12   <---------TOE2(3) ---------->DOF2<---------ATHB51 --->ZAT6      <---------MYB111(1)   <---------WOX13(1)   <---------YAB1<----------ID1--------->TOE1(3)   ctaaccttaagcaaaaacctacccataacaatgaagaagattgatttcaatgcactgattaagatataactaaaaaaacaaagactaacctcaattatgt  13885100                                                                                              <------                                                                                              -------                                                                       --------->TOE1(2)   <---------ANAC58                                                                       --------->TOE2(3)   <---------ANAC58                                    --------->DAG2        ==============================HOX2a_HOX2a                                  ---------->DOF2         <----------DOF2                 --------->HSFB2a(1)     ------>ZmHOX2a(1)       <---------At4g35610          ------>ZmHOX2a(1)               --------->HSFC1(2)     --------->AtLEC2        --------->At4g35610        ------>ZmHOX2a(2)                 <---------HSFC1(2) >YAB1                 <---------ZAT6 ----------->GT1 <---------ARR11(3)         <------ZmHOX2a(2) ---YAB1              >>>>>>>>>TAC1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     XXXXXXXXXXXXXXXXXXXX>MIR3440B-3P   ttgattcctgcaaactcaagctcgagtgttcatcagaaaagggtaacatcaagcttgatcctttttcattcaaccttggaacgatcaaacgaagcgtctc  13885200           <---------MYB52(1)           <-----------HVH21          <-------GAMYB             <---------ARR11(3)         <---------MYB46(3)         --------->ARR11(3)         ------>ZmHOX2a(2)         <---------DEAR3(2)        <---------CCA1(2)     --------->GLK1(2)         --------->LBD16        <---------MYB59         <---------GLK1(2)                ---------->DOF2       <---------LBD16          --------->TOE1(3)     --------->LBD16           <-----------GT1  ----------->HVH21       <---------ANAC55(2)        <---------HSFB2a(2)  --------->ARR14(2) ---ARR14(2)              --------->ANAC55(2)        --------->HSFB2a(2)  <---------ARR14(2) -->ARR14(2)    <----------DOF2 --------->TOE2(3)--------->At4g35610 ------->GAMYB  <----------DOF2   cgatgtaacgccggttaactttctcaattcgtaacctaaatctttcagagaagctccagaatcgatctcaacagagtatttgtttcctttccaaagaaga  13885300                    ------->TEIL                    --------->ARR14(2)                                         --------->GLK1(2)                    <---------ARR14(2)                                --------->GLK1(1)                   <---------CCA1(2)                               --------->ANAC58                 --------->LBD16                    <---------MYB52(1)<---------GLK1(1)                 ------>ZmHOX2a(1)                 <-------GAMYB<------ZmHOX2a(2)               <---------LBD16                    ----------->GT1  --------->ANAC58        <---------AHL20(2)         <---------AHL20(2) --------->AtLEC2 --------->ATHB12  --------->ARR11(3)          --------->AHL20(2)    <---------YAB1 <---------GLK1(2)        <---------ATHB12   <---------ARR11(3)   <---------YAB1   gaaactctgattttttttcctgaatcttccatgcgatgagagaccattgattcggttaatctgaagatcaagaaatctgagaatttgtgataaaaaaatt  13885400                                                     --------->ATHB12                                                  <-----------GT1                   ------>ZmHOX2a(2)                                                <---------YAB1                     <------ZmHOX2a(2)                    --------->ICU4            --------->YAB1                       <---------GLK1(1)                  ---------->DOF2             <---------ICU4                      <---------ARR11(3)               --------->TOE1(3)             <---------YAB1                       <---------AGP1               ----------->GT1            --------->AHL20(1)                      --------->ARR11(3)               --------->TOE2(3)          <---------AHL20(1)                  ---------->DOF2            <---------ARR14(2)            --------->AHL20(2)          >>>>>>>>>TBF1--------->GLK1(1)            --------->ARR14(2)            <---------AHL20(2)        *TSS  ---------->DOF2   cttcaatttagacagaaccgtaaagattagtatgtaagaacaaatttattattatccattggacttgttgaagaagaaaagaaagatctctctctctcta  13885500                               <---------TGA2(1)                                                   <-                               --------->TGA2(1)                                                   <-                               --------->bZIP60(1)                                                 <-                               <---------bZIP60(1)                                                ---         <---------ANAC55(1)   --------->ANAC55(2)                                      <---------ANAC58         <---------ANAC46      <---------ANAC55(2)                                      <---------ANAC46         --------->ANAC55(2)   <---------ANAC46                                  <---------At5g28300<         <---------ANAC55(2)  ----------->STF1                                  --------->MYB52(1)---        <-------TEIL         <---------TGA2(2)                              <---------YAB1<---------MYB52(1)    <---------YAB1--------->TOE1(2)                                    <---------ICU4   <---------ANAC58  <---------At4g35610   <---------YAB1 ---------->DOF2<----------DOF2 --------->ICU4 <---------MYB52(1)  --------->YAB1------->TEIL----------->TGA1  <---------AGP1      <------NtERF2 <-----------GT1 <----   tctctgatgatacgtatgcacatacgatgaatgacgtaatcgaaagtagttctgttcttttttttggctgcaaagattacaataaccgttccgtttcggt  13885600                                                                                  <---------AHL20(1)                                                                                  <---------AHL20(2)                              <-----------GT1                                     --------->AHL20(2)                           --------->YAB1                                        <---------AHL20(2)                          <---------YAB1                                     --------->AHL20(2)        <---------YAB1    <---------AHL20(2)                                 <---------AHL20(2) <--------P ------>ZmHOX2a(2) --------->YAB1                                 <---------AHL20(1) <---------MYB52(1)      --------->AHL20(1)                                  --------->AHL20(1) -----MYB83<-----------------AGL1                     <---------YAB1    <---------MYB52(1) -----MYB46(1)           <---------AHL20(1)      <------ZmHOX2a(1)     <-------GAMYB --------HSFB2a(2)       --------->AHL20(2)    <---------TOE2(3)      ----------->GT1 ------>MYB59  --------->ARR14(2)        <---------RVE1(1)        --------->ARR14(2)     <XXXXXXXXXXX ---------MYB52(1) ----------->GT1       <---------CCA1(1)        <---------ARR14(2)    <------MYB83 ------>MYB46(2)--------->CCA1(2)       <---------ARR11(3)       <---------DEAR3(2)     <------MYB46(1) -----MYB52(1) <---------ARR14(2)       --------->ARR11(3)      ----------->ARR10--------->AHL20(2)   tcggtaagttctgatcggatatggcaatataataaccattcagatattttaggattacaattcgggtcgattcggttattttattaaatttggtttagtt  13885700                                                                       <---------AHL20(2)                                                                       --------->ICU4                                                                       --------->AHL20(2)                                                                  ----------->GT1              <-----                                                                  <----------ID1         <---------YAB1                          ------->TEIL           ----------->GT1 ----------->GT1     ----------->GT1               --------->MYB52(1)           <---------AHL20(2)  ------------------------>ANAC81<-----             <---------KAN4(2)              --------->AHL20(2) --------->DAG2      ---------->DOF2 XXXXXXXXXXMIR850 ------->GAMYB     ----------->GT1           ---------->DOF2 ---------->DOF2 -------   tggatttttagccagaataaccgaaatgaaccgaatagaagtgaaattaatcggaaaaaatacaaaaagggaaaaaattagaaagaaaagtataatttgg  13885800                                                                                                    <                                                                  ---------->DOF2                 ---                                                                 <---------AHL20(2)               <--                                                           <---------ANAC46                 ---------                 <----------DOF2                          <---------At4g35610               ---------              --------->GLK1(2)                       <-----------RAV1(1)                   ---------   --------->AHL20(2)                               <---------GLK1(1)                       ---------   <---------AHL20(2)                               --------->GLK1(1)       <---------WOX13(1)   ---- -MYB83      --------->ARR11(3)                     --------->CCA1(2)     --------->ATHB12  --------- -MYB46(1)   <---------GLK1(2)                     <---------ARR14(2)    <---------YAB1     --------- -->MYB59    <---------ARR11(3) --------->YAB1     --------->ARR14(2)    --------->ICU4     ---------   ttcaattttttaaaagattctttgattttgacaaatataacttaaaacatttggatatgctgcttatataaagtattgattgtttgatttctaaacgtaa  13885900  <---------AHL20(2)  --------->ARR11(3)      <---------ANAC46  <---------AHL20(1)<---------TOE1(3)  --------->AHL20(1)<---------TOE2(3) ---------TOE2(3)   <---------YAB1 ------>AHL20(2)  --------->YAB1 -------AHL20(2)  -------->HAHB4 -->GT1           <---------ICU4 >YAB1           --------->ICU4                                       <---------ANAC58 >ANAC58         <---------YAB1                              <------MYB83 >ANAC58         <---------ATHB51                            <------MYB46(1) ----->ICU4    <---------ICU4                   <---------TOE2(3)     <---------ANAC58         ------ >ANAC55(1)    --------->YAB1      <---------YAB1----------->GT1  <----------DOF2              <----- >ANAC46      <---------AHL20(2)  <---------AHL20(2)        --------->MYB59     --------->MYB52(2)  < >ANAC55(2)   <---------YAB1      <---------AHL20(1)     --------->ATHB12     <---------MYB52(1)  <--   ttaatattttgagtttataattatggttttgtgtattatttttgggtattttggttaaatgtttggttcttttcgtttctgttagtttggataggggatt  13886000  Previous    Next  AGI:  At5g35690.1    Description:  similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G55915.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24086.1); contains InterPro domain WLM (InterPro:IPR013536); contains InterPro domain PUG (InterPro:IPR006567) Range:  from: 13882082    to: 13885468    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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