Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <----------DOF2                                                   ----------------->AGL1                                              --------->YAB1          --------->ANAC46                   <---------YAB1                                 <--------          --------->ANAC58          <---------ANAC58<---------DAG2                       <-----------GT1          --------->ANAC58          <---------ANAC46<---------------AGL15             ------>MYB46(1)   --------->ANAC58                 <---------ANAC58--------------->AGL15           <---------MYB59   --------->ANAC58                --------------->AtSPL3                         --------->SPL7   --------->ANAC46                --------------->AtSPL8                       <---------SPL7 <---------ALFIN1              <---------MYB46(3)<-----------GT1              --------------->AtSPL8 -------->ZAT14                <------MYB46(1)<---------ICU4                  --------------->AtSPL3 ---------ZAT14                <------MYB83 --------->ARR11(3)             <---------ZAT14  <-------- ------>ANAC46    ----------->RAV1(1)       <---------ARR11(3)     --------->MYB52(1) ------>MYB83   acaacactccaaacgcaatccaacaaaattagttggtttcgtacaatatcattaccttttctagtcacaaaacagagtaaaccgtaccaaataacttttc  13872900                                                                                             ------>ZmHOX2a(2)                                                                                            ---------                             --------->ANAC58                                              <---------ARR11(3)                        --------->ANAC58                                                   --------->ARR11(3)                        --------->ANAC58 ----------->GT1                                  --------->YAB1                       --------->DAG2  ---------->DOF2                             ------>MYB46(1) --                ----------->GT1   <---------MYB52(1)           <---------MYB52(1)  ------>MYB83    --                <----------ID1    --------->ICU4             <---------ANAC58     --------->WOX13(1)              ---------->DOF2--------->ANAC58                <---------ANAC46    --------->AtMYB61 <- -DAG2<---------ATHB12---------->DOF2 <------ZmHOX2a(1)      <---------ANAC58   --------->MYB46(3) <- --DOF2--------->AHL20(2)  ---------->DOF2        ----------->GT1         ---------->DOF2<---------ATHB12   cattgccaatgaaataaaaagaaaaaaagcaaagccattaggaaagtgaatagagtgaaattgccgtttgcataagaaaagaaccaatccaatgatctcc  13873000                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                   <---------YAB1        ---------->DOF2                                                          --------->YAB1       --------->AtMYB61                                                         <---------ICU4 <-------TEIL                            ---------->DOF2                      --------->YAB1--------- >GLK1(1)                       <---------TOE2(3)                       --------->ANAC46--------->AHL20(2) ----->MYC2                 <----------DOF2                          --------->ZAT14    <---------AHL20(2) ----->MYC3               <---------------AGL15                      <---------ZAT14--------->AHL20(2) ------MYC3               --------------->AGL15                 --------->ANAC58--------->ICU4 ------MYC2   <---------CCA1(2)---------->DOF2                  --------->ANAC58<---------ATHB12   atgtgcataccaaagcatctctctattactctttaaagtaatccaaagtcgagaccacaaacactcacgacttcactcaaaaatcattatataaatatat  13873100                                            <---------ICU4                                       <---------YAB1   --------->ANAC46 ->ARR11(3)                   <------ZmHOX2a(2)         --------->ANAC58 --ARR11(3)               --------->HSFB2a(2)   <---------ZAT18       <----------DOF2 ->AHL20(1)               <---------HSFB2a(2)   --------->ZAT18       <---------DAG2 --AHL20(2)              <---------LBD16--------->ZAT6  --------->ANAC58 --AHL20(1)       <----------DOF2    <---------ICU4  --------->ZAT14<---------At4g35610 ->AHL20(2)      <---------ANAC58    --------->YAB1  --------->ARR14(2) >AHL20(2)       <---------ANAC58   <---------ATHB12 <---------ARR14(2)       <----------DOF2   ttctctcatttacagagatgcttttcttctggatcacaatcatcactaattgcactatacgctatgtttcagcttttcttctttttctctctaatacaat  13873200                                                                                                    <                                                                                                    -                                                                    <----------DOF2     <----------DOF2               <-----------GT1                  <---------YAB1     <---------DAG2 <-----------GT1<---           <----------DOF2                  <---------ANAC58     ------->TEIL    <-------------------      ------->TEIL                          <---------ANAC58   <---------ZAT18<----------DOF2    ==== ------>ZmHOX2a(1)                       <-------MYC3       ---------->DOF2 ---------->ID1 --------->YAB1 <----------DOF2      ------->TEIL       ------->MYC3    --------->YAB1 <----------DOF2 =============   gtcctttgaatctctttttacatgtactcttgtacatgactcatgtgcttgtgattctaaaataatgcacctttctttttcttttttcttctttcatagc  13873300                                    ---------->ID1                           ------->MYC3                           <-------MYC3                          --------->TGA1a              --------->WOX13(1)  <---------MYB46(3) -----------TBP           <---------TGA1a                 --------->ARR11(3) -------->AHL20(2)        ==============================================bZIP_DOF -------DOF2------------>CBF      --------->MYB52(2)      <---------ARR11(3) -----ANAC81<---------ATHB12     *TSS     <---------CCA1(2) ===================================bZIP_DOF           <---------TOE1(2)     <---------HSFB2a(2)   <- ===================================bZIP_DOF <-----------GT1 <----------DOF2 --------->HSFB2a(2)   <-   ttttatatagagtaatcaatctcatcacatgtgtgtttgttcccatttctcaattcccaagttctttatccaaattgttctgaaacatagagagaaacaa  13873400            <------ZmHOX2a(1)         <------ZmHOX2a(1)                           <---------At4g35610      <-------GAMYB      <-----------RAV1(2)            <------ZmHOX2a(1)    <---------YAB1     <---------MYB46(3)  <-------GAMYB                   <---------LBD16    --------->At4g35610  <-----------RAV1(1) --------ANAC58      --------->At4g35610     --------->ATHB12            ------->TEIL --------ANAC58      <---------At4g35610    <---------ATHB12    --------->REM1(1)   tgggtgttacaggaggattagtcagaagcattttcttcaggaacaaatcatttggagctcatgactacaacaatgtatgtggttgtcattttcatcaaaa  13873500                                                                                                    <                                                                                                    -                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                          <---------GLK1(1)                                                        <XXXXXXXXXXXXXXXXXXXXMIR408       <---------ZAT2                                                      <---------LBD16   <------ZmHOX2a(1) <---------At4g35610   --------->YAB1                                    <---------LBD16    =============================  <---------ATHB12                             --------->ICU4    --------->WOX13(1)       --------->ZAT2   acccatcatcgttctggtttttgttttatctactacttcaaatgttgtaatgttttcagggaagaggcaatctaggagagaagaaacgatggagctcggt  13873600             --------->LBD16                                      --------->GLK1(2)           <---------LBD16                                       --------->ARR14(2) <------ZmHOX2a(2)                                    --------->GLK1(2) ---------ARR11(3)                                   <---------GLK1(2) -------->ARR11(3)                                --------->YAB1 <---------GLK1(2) -----MYB52(1)  --------->At4g35610           --------->ATHB12   <---------ARR14(2) ------HVH21<---------ANAC46                <---------WOX13(1)  <------ZmHOX2a(1)               ----- --GAMYB<----------DOF2  <-----------GT1--------->At5g28300   <---------TOE2(3)              <------- =======HOX2a_HOX2a  ------->TEIL      <---------ANAC46     ---------->DOF2                 ---------   tagatcatacctttgcggagatgaatttaactctgttcgcgctgtgaatgattcagaatcgataaaggattctgaggctcttcttacaatgtctcagcaa  13873700             <---------MYB52(1)            <---------ANAC46   <---------MYB52(1)            <------MYB46(1)   <-------GAMYB         <---------GLK1(2)                      <---------MYB52(1)   --------->ZAT14           <------MYB46(1)       --------->At4g35610                    <-------GAMYB   <---------ZAT14  <----------DOF2                <---------At4g35610                --------->ARR14(2) ---->At4g35610    <---------DAG2               <-------TEIL                          <---------ARR14(2) --At4g35610<------MYB83     <------MYB83     --------->ARR14(2)              <------ZmHOX2a(1) >ANAC46   --------->MYB59  --------->MYB59   <---------ARR14(2)        <------ZmHOX2a(1)<---------ANAC46   ctgagttcagagttcggtatgccttttggttcggttatcgcaatcgaagattcagcttctgtgagacatttggaggatgaggactctggttccgttaaga  13873800  Previous    Next  AGI:  At5g35670.1    Description:  IQD33 (IQ-domain 33); calmodulin binding. similar to IQD3 (IQ-domain 3), calmodulin binding [Arabidopsis thaliana] (TAIR:AT3G52290.1); similar to IQD2 (IQ-domain 2), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G03040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65424.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 13873333    to: 13875289    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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