Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            ----------->HVH21                                                        ----------->GT1                                                       --------->TOE1(2)                                                       ------->MYC3                                                      <---------ANAC46                                                      =========================bZIP_DOF                                                      <---------ANAC58                                                      <---------ANAC58                                                      <---------O2                                                      <---------TGA1a                                                      --------->O2                                                      --------->TGA1a         --------->ANAC58        <---------At4g35610                      <---------ZAT6               --------->ANAC58        --------->At4g35610                    ----------->GT1                --------->ANAC46  <---------ANAC58                             <---------ANAC46              <---------ZAT18  <---------ANAC46                           <---------ZAT14            <---------ANAC58  <---------ANAC58                           --------->ZAT18            <---------ANAC58 -------->MYB52(1)                    <------ZmHOX2a(1)<-------MYC3 <----------DOF2        <---------MYB46(3) ---->ANAC58              <------NtERF2      --------->ZAT14       <---------DAG2    --------->YAB1 ---->ANAC58        <-------TEIL     <----------ID1   <---------ANAC55(1)    --------->ZAT18   gcttacgggcagatgctatgggttcggaggcactagaagaggacaagtgtagtgaaacgtgtgaaactgcctttccttgtgcgcaattcatagttgttgt  13852900                        --------->At4g35610                       <---------------AGL15                       ------->TEIL                               --------------->AGL15                    --------->ANAC58                             ----------------->AGL3                    --------->ANAC58                             ----------------->AGL2                  <---------ALFIN1                            ------>ZmHOX2a(1)                 <---------REM1(2)                     --------->ANAC58               <-----------GT1    <---------ZAT14      --------->ANAC58---------->DOF2    <----------DOF2 --------->ANAC46            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------ANAC46   ccaaggctttgaaaatttctccacgcatctcaagagtgaagaacatagaaagaatgtaagcatcctatccaaaaaaagacagacttgttgtgtccataca  13853000                                                                             <---------ZAT2                                                                         --------->SPL7                                                                       <-----------HVH21         <---                                                                       <---------SPL7           <----                                                                      <---------ANAC58        -------                                                                      <---------ANAC58  --------->HSFC1(2)                                                                   <-----------GT1      <---------HSFC1(2)                                                             <---------RVE1(1)        <---------ARR14(2)                                                            <---------GLK1(2)--------->ZAT2  --------                                              --------->TOE2(3)<---------AHL20(2)   --------->ANAC58                                         --------->At4g35610<---------ARR11(3)      --------->ANAC58 <---------YAB1                         <-----------RAV1(1) --------->ARR11(3)     xxxxxxxxxxxxxxxxxx   tttttcattgtctaactacatatgtagggttcttctagttatctgttgccttaatttgactagattttttttccgtccgagcagggacgatacttcgata  13853100          --------->ZAT2          <---------At4g35610          <---------ZAT2          --------->At4g35610              --------->ARR14(2)                                      <-    ---------->DOF2            >>>>>>>>>TBF1--------->CCA1(2)        <---------ANAC46             <-- ------TOE2(3)              >>>>>>>>>TBF1  <---------ARR14(2)        <---------ANAC58       <-------- -----DOF5.7(2) --------->ANAC58          <------ZmHOX2a(1)  <-------TEIL                   <-------- -->DOF5.7(2)   --------->ANAC58  >>>>>>>>>TBF1            <---------PCF2                <-----------GT1 ->HSFB2a(2)  ---------->DOF2  ------------------------>ANAC81       <---------ANAC58 <----------DOF2 xxxxx>smallRNA(fl3)     >>>>>>>>>TBF1   ----------->GT1 <---------MYB46(3)           <---------DAG2-   acgatacaaagcagctgaaagcaagaagaagaagaagaagaagaggatataagagttgatgggtccatatggcgaatgtcaagactcgcttttacttttc  13853200                                                             <---------MYB52(1)                    <x                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <x                                                --------->ARR14(1)                                 <x                                                --------->CCA1(2)                                  <x                                               --------->ARR11(1)                                 <xx                                               --------->ARR11(3)                                 xxx                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                     xxxx                                       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    xxxx                                      --------->ANAC58   <---------At5g28300                    xxxxx                                      --------->ANAC58 ----------->HVH21                        <----                            --------->ANAC58   <---------GLK1(2)                      <---------LBD16             --------->YAB1 --------->ANAC55(2)<---------ARR11(3)                     <---------At5g28300          <----------DOF2   --------->ANAC55(1)<---------ARR14(2)        <xxxxxxxxxxxxxxxxsmallRNA(i) --------MYB52(1)           --------->ANAC46   --------->ARR14(2)  ---------->DOF2   <-----------GT1< -------At4g35610           --------->ANAC58  xxxxxxxxxxxxxxxx>smallRNA(i)          <---------REM1(2) -DAG2    --------------->AGL15    --------->ZAT18     <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)      ------- --DOF2   <---------------AGL15   --------->ALFIN1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------MYB52(1) -------->ZAT14            <---------LBD16   ----------->ARR10    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   agttaactaatacttttataagaaattttcacggaagtggacgaaaaaagatttgctctcaccgtttgtcaaagtgagaactggttttcacggtttgtct  13853300                     <---------At5g28300                 ------>MYB46(1)                 ------>MYB83       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   ------------>CBF <-----------GT1          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)      *TSS  <---------MYB59 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)      --------->ZAT18 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  --------->ATHB51        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->YAB1         <---------At4g35610 xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)    -------->HAHB4         --------->At4g35610 xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->ATHB12      ----------->RAV1(1) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------ICU4      <---------ZAT14 xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <--------ATHB1      --------->SPL7 xxxxxxxxxxxxxxxxxxx>smallRNA(le3)    --------->ICU4 --------->MYB52(1)--------->ARR14(2) xxxxxxxxxxxxxxxxxx>smallRNA(le3)     <---------ATHB51     --------->ZAT14 xxxxxxxxxxxx>smallRNA(i)--------->LBD16<------------CBF  --------->ALFIN1  <---------MYB52(1) xxxxxxxxxxxxxxxxx>smallRNA(le3)      <---------AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  ---- ------DOF2     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)------>MYB83      <---------ARR14(2)        ---- xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------YAB1 ------>MYB46(1)<---------ANAC58           ------ --->ID1       <---------MYB59   --------->TOE2(3) --------->AtMYB61<---------ANAC58           <-----   tttcattcaatttcggaccaaattaccctgagaaaacttaataattgcacaaaccaaaccgtgcagcagttcgtatcggttaagttgatggcataaacca  13853400                                        <xxxxxxxxxxxxxxxxsmallRNA(i)                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                    <xxxxxxxxxxxxxxxxsmallRNA(i)      <---------At4g35610          <-------TEIL <----------ID1   ---------->DOF2                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                      -------- -->MYB46(1)                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    <----------ID1 -->MYB83             xxxxxxxxxxxxxxxx>smallRNA(s)                           --------->MYB52(1) --->AtMYB61   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ------------------------>ANAC81 ---------->DOF2 ----MYB59<---------MYB52(1)  <---------LBD16 ---------->DOF2         <xxxxxxxxxxxxxxxxsmallRNA(le3)   aaccctacagcagttgttttcggtttagtttatgcggttcagttttgaaaaagacaaaaaaaaaaaaactgaaacgaagaaaccgaagaaaaagaaaaag  13853500                                                                                                   xx                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              <------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <------MYB46(1)                                                                                            <------MYB83                                                                                           <---------MYB46(3)                                                                                           --------->MYB55(2)                                                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                     <---------ARR14(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 --------->CCA1(2)                   --------->ARR14(2)    <---------MYB59 --------->MYB59              ----------->ARR10            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <-----------RAV1(1)          ------->GAMYB                   --------->ANAC58   <---------ANAC58       xxxxxxxxxxxxxxxxx         <---------ANAC46           <xxxxxxxxxxxxxxxxsmallRNA(i)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       --------->MYB52(1)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->ANAC58   <---------ANAC58  xxxxxxxxxxxxxxxxxxxxxx -->DOF2>>>>>>>>>MYB98           ---------->DOF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ATHB12   agaagagagtaacggagagatttgagagagaattagaaagcgaaacgaaattcagtatccattgcttcaaaattcgacataacttcgaattgttgggtag  13853600                          <---------LBD16                          --------->LBD16  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ---GAMYB                ------->GAMYB --->MYB111(1)           <---------LBD16 --->MYB46(2)           <---------LBD16                   --------->ANAC58           --------->LBD16 ----MYB46(3)          --------->MYB52(1)                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --->MYB52(2)        <---------MYB55(2)               --------->LBD16                <xxxxxxxxxxxxxxx --->MYB55(2)        <---------ALFIN1                 ------>NtERF2                  ------>NtERF2 --->MYB111(2)<---------GLK1(1)                      --------->LBD16                 <xxxxxxxxxxxxxxx --P          --------->GLK1(1)                      --------->ANAC46               <---------LBD16 -ANAC58    <---------ZAT18                     <-----------GT1          <---------At5g28300 -ANAC46    <---------ZAT14              <---------At5g28300<xxxxxxxxxxxxxxxxsmallRNA(i) -ANAC58    --------->ZAT14             <-----------GT1   --------->ANAC58      --------->KAN4(2) xxxx>smallRNA(si3)  --------->MYB46(3)xxxxxxxxxxxxxxxx>smallRNA(i)     <-----------GT1          ---- x>smallRNA(si3)   --------->ANAC46---------->DOF2  <---------LBD16---------->DOF2 <---------LBD16---   ttgaattgagccactgaactcccacaaccggggaagagaaagttactgtttttccccgcgaagccaagagaaagttactgtttattccggcgaaatttga  13853700                                                                                       <---------ANAC46                                                                                     --------->GLK1(2)                                                                                 <------ZmHOX2a(1)   ------>NtERF2                                                           --------->ANAC46   --------->LBD16                              ---------->DOF2           --------->LBD16  <---------DEAR3(1)                      --------->MYB52(1)              <---------LBD16 <---------LBD16 --------->TOE2(3)   --------->DAG2     --------->LBD16  <---------LBD16 ----------->GT1 xxxxxxxxsmallRNA(si3)      <---------ANAC58<----------ID1 <------ZmHOX2a(1)<xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxsmallRNA(si3)       <---------ANAC58--------->ANAC58             <-----------RAV1(2) --->TEIL---------->DOF2    <---------ANAC46--------->ANAC58      <---------AtLEC2 ---------->DOF2 ------>MYB46(3) <----------DOF2    ---------->DOF2    --------->LBD16xxxxxxxxxxxxxxxx>smallRNA(i)   acctccggcgaaatagcaactttagctatggctgggaataaagcaaacgacaaagtcccgaggaagtagcatggtccagggaaggagaagcgggtattaa  13853800  Previous    Next  AGI:  At5g35640.1    Description:  similar to nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G01355.1); similar to Os07g0637200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060400.1); similar to hypothetical protein OsI_026076 [Oryza sativa (indica cultivar-group)] (GB:EAZ04844.1); contains InterPro domain Protein of unknown function DUF537 (InterPro:IPR007491) Range:  from: 13851863    to: 13852836    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g35643.1    Description:  transposable element gene. pseudogene, hypothetical protein Range:  from: 13853345    to: 13860385    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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