Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->YAB1                                                               <---------ATHB12                                                              --------->ANAC58            <---------MYB52(2)                                --------->ANAC58    <------MYB46(1)                                           ------>MYB83    <------MYB83                      <---------DAG2          ------>MYB46(1)    <---------ANAC46                  <----------DOF2  --------->ANAC58          <---------TOE2(3) -------AHL20(2)                  <-------MYC3         --------->ANAC58--------->TOE1(2)   <---------ZAT18 ------>AHL20(2)                  ------->MYC3----------->RAV1(1)    ------->TEIL<---------TOE1(3)   ttaatttggtggaaactaacatgtaggccaagttcacatgctttttggcaacaagagaagcaccaagcatgaaactgggatttgaggtattagtgcaact  13807900                                                                                  <---------ALFIN1                                                                                  --------->DEAR3(1)                         --------->ICU4                                          --------->ATERF1(1)                       --------->YAB1                                            --------->ORA47(2)                 <---------ALFIN1                              <-----------GT1   --------->DEAR4(2)                --------->ZAT14                              <----------DOF2    <---------ATERF1(1)                <---------ZAT14                             <---------ICU4      ------>NtERF2               <---------ALFIN1                           --------->ARR11(3)    <---------RAP2.3(1)              --------->ANAC46                           --------->GLK1(1)     <---------ANAC58            --------->YAB1                               <---------GLK1(1) <---------ANAC58           --------->MYB46(3)                       ---------->DOF2        <---------ANAC58         --------->WOX13(1)                    --------------->AGL15 <----------DOF2  ------>ZmHOX2a(1)        --------->MYB46(3)                     <---------------AGL15 <---------DAG2------>NtERF2   ----------->GT1   <-----------HVH21   <---------GLK1(2)<---------ARR11(3)   <---------ANAC58    <-   tgtgagcgtaacaatcaccacactgtcatagttaagctctacaggttttccattgaaagaaatctttactacttttttcttgcgcctccttaggtatagc  13808000                                           ------>MYB83                                         <---------MYB111(1)                                         --------->MYB46(3)                                         <---------MYB55(2)                                         <---------MYB111(2)                                        --------->ANAC58                               ---------->DOF2                             --------->ANAC58                             --------->ANAC58          <---------ALFIN1                           --------->YAB1--------->DEAR3(1)            <---------------AtSPL8      --------->ANAC58 --------->ANAC46  --------->AHL20(2)            --------------->AtSPL8     --------->PCF2------>NtERF2     --------->AHL20(2)      <---------ATHB12    <---------ATHB12 ------>MYB46(1)        --------->AHL20(2)    --------->AHL20(2) --------ALFIN1         --------->WOX13(1)--------->ANAC46    ----------->GT1   ----------->GT1   caaaccctatcaagaatgtacacatccaatcaagaaagtagcacccaccaagtgcctccacagcaagtttaaatcaaatatatgctaaaaaaaaatacac  13808100                                                                            <----------DOF2                                                                           <---------------AGL15                                                                           --------->TOE2(3)                                                                           --------------->AGL15                                                                          ----------------->AG                                                                          <-----------------AGL3                                                                          ----------------->AGL3                        --------->TOE2(3)                                 <-----------------AGL2                   --------->TOE2(3)                                      <-----------------AG                 <-----------ARR10                                        ----------------->AGL1                 <---------ARR11(3)                                       <-----------------AGL1                 --------->ARR11(3)                               <----------DOF2                  <-                 --------->AHL20(1)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   <-                 <---------AHL20(1) --------->TOE2(3)           --------->ZAT2                     <-                --------->CCA1(1)   <----------DOF2             --------->At4g35610           <------                --------->RVE1(1)------>MYB83                   <---------At4g35610         ---------              --------->YAB1     ------>MYB46(1)                <---------ZAT2        --------->ZAT6           --------->YAB1      <---------MYB59              <-----------HVH21  ---------->DOF2<------   ctccatataccaagtataatatcttaacttaaacctaactttagtgtctaaacacgagtgccagtcagctttcatttcctttaaaggaacactatcatgt  13808200                      <---------YAB1                  --------->ARR11(3)                  <---------AHL20(1)                  <---------ARR11(3)            --------->YAB1                   --------->YAB1          <---------ARR11(3)                 --------->AHL20(2)          --------->ARR11(3)            --------->AHL20(2) ----------->GT1 --------->CCA1(1)     <---------ATHB12                             --------->CCA1(2) --------ANAC58  --------->RVE1(1) <---------ATHB12                                --------->AHL20(1) --------ANAC58<---------ICU4      ------------>CBF                                <---------AHL20(1) --------ANAC46--------->AHL20(2)--------->WOX13(1)                           >>>>>>>>>>GT-3b -----RAV1(1)  --------->YAB1  ------------>CBF       ----------->GT1    ---------->DOF2           <- >YAB1  ----------->GT1        --------->WRKY18(1)  ---------->DOF2    <---------AHL20(2)       <---- ---O2---------->DOF2<----------DOF2 --------->WOX13(1)         --------->MYB52(1)--------->AHL20(2)-   ggcctgtgaaaagataataatatctttatagtggtcaatcaatcaaataatatcaaaagaaaaaaaaaacgatttaaaagaaaaatatataagtttagtt  13808300                                         <---------ARR14(2)                                       <---------MYB46(3)                                      <---------ANAC58                                    ------------>AtMYB77                                --------->ALFIN1                        <---------ICU4<---------ANAC58                        --------->ATHB51<-------GAMYB            <------NtERF2      <------NtERF2           --------->LBD16     <-------GAMYB                                       <---------LBD16          <---------ANAC46    <---------MYB46(3)                                  <---------bZIP60(2)          *TSS          <--------ATHB1<---------ANAC46                            <---------O2          <---------ANAC58   <---------RAP2.6(2)                                  <---------ANAC46          <---------ANAC58   <---------ANAC46                                   --------->MYB52(1)         <---------LBD16--------->YAB1<---------DEAR3(1)                       ----------->TGA1    <---------AHL20(2) <---------ATHB51<---------DEAR3(2)                      ----------->HVH21 <---------AHL20(2)    --------->ICU4 <---------RAP2.6(2)                      --------->ALFIN1   --- --------YAB1    --------->ANAC58--------->MYB52(2)                          --------->At4g35610----- -----AHL20(2)   --------->ANAC58<---------MYB46(3)                          <---------bZIP60(2)<---- -------->AHL20(2)   --------->YAB1--------->ALFIN1                  --------->CCA1(2)      <--------   tattatataatggcgggaaacgacaataatggcggtagtggcggtttctatcgagattggatgtacaagagatttgatgaggtgacggggaatttgtcag  13808400            <------ZmHOX2a(1)    <-----------RAV1(1)    =================RAV   --------->ARR11(3)                                                                               - <---------ARR14(2)                                         --------->ZAT14                         < --------->ARR14(2)                           --------->ANAC58       --------->At5g28300   <---------ANAC46 ------>RAP2.6(2)                             --------->ANAC58      ----------->GT1      <---------ANAC46 ---->At4g35610          --------->YAB1     <-----------GT1 <---------ZAT14          ------>ZmHOX2a(1) -----At4g35610         <-------TEIL     --------->YAB1<---------ZAT14      <---------AHL20(2)      < ---HVH21<-----------RAV1(2)          --------->YAB1   --------->ZAT14      <---------YAB1 <---------ZAT6   ccgaatatgttgcaggagttgagaaattcatgacattctctaatagtcaccctatagtacagagtagtcgaggtaaatttcattgtccttgtagtgtatg  13808500                                                                                <------MYB46(1)                                                                                <------MYB83            --------->ANAC46                                                    <---------ANAC46   <---------YAB1                                                              --------->MYB59   ----------->GT1                                                             --------->MYB46(2) --------->YAB1                                                            <---------YAB1 <---------ICU4               <---------ZAT6                         --------->ICU4                 = -------->ICU4          <--------P                                   <---------YAB1                 < ---------ATHB12    <---------ANAC46                  <---------TOE2(3) <---------YAB1        ------- ---------ATHB51    <---------LBD16                --------->WRKY18(1)<---------ICU4    <---------AtLEC2   caataatgaaaaacacatcatctcgggtagaagagttagtagtcatttgtttagtcaaggatttatgtctgattattatgtttggtataagcatggaaaa  13808600                                                                                                xxxxx                                                                                               ------                                                                                     <---------------AGL15                                                                                     --------------->AGL15                                                                                    <----------------                                                                                    -----------------                                                                                    -----------------                                                                                    <-------TEILxxxxx                                           <---------AHL20(2)                       <----------------                                        ------->TEIL              <------MYB46(1) --------->ARR11(3)                                     <---------ANAC55(2)          <------MYB83    <---------ARR11(3)                --------->TOE1(2)    --------->ANAC55(2)         <---------MYB46(3)<------ZmHOX2a(2)            <---------ARR14(2)     <------ZmHOX2a(1)    <---------YAB1            --------->ARR14(2)            --------->ARR14(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               <---------ARR14(2)           --------->CCA1(2)--------->ANAC58          <---------ICU4      <---------ANAC58    -------        ----------->GT1     --------->ANAC46          --------->YAB1      <---------ANAC58    <------ ==================================================================================================== -----------------AGL3    <-----------------AGL1     --------->ICU4       <---------ANAC46xxxxxxxxxxx --->DOF2  <---------GLK1(1)--------->ANAC58   <---------ZAT6   --------->ALFIN1 xxxxxxxxxxxxxxxxxxxx   gaactgaatatggatatacgaacgagttacacgaataggacgtattttagtgagaattatgaagaagtgggtaatgtcgtagaagatccatatgtggata  13808700                           <---------ANAC58                           <---------ANAC46  <---------DOF5.7(2)   --------->ALFIN1 <---------WRKY38(1)  <---------ANAC58 xxxxxxxxxxxxxxxxx>smallRNA(le3) --->CCA1(2)          <---------ANAC58                        --------->YAB1 -AGL2                <---------ANAC46                        <xxxxxxxxxxxxxxxxsmallRNA(i) >AGL3            <---------AHL20(2)                    --------->MYB111(1) >AGL2       <---------AHL20(2)                         <---------MYB46(3)                        --- xxxxxxxxxxxxxxxxx>smallRNA(se3)                       <--------P --------->GLK1(2)               <-- -AGL3  <-------TEIL <---------TOE2(3)               ----------->GT1                              <-- -->ARR14(2) --------->AHL20(2)                      <------MYB46(1)                              --- ---ARR14(2)--------->AHL20(2)              --------->YAB1   <---------YAB1                      <--- MADS_MADS------->TEIL<---------O2 --------->YAB1    <------MYB83<---------GLK1(2)         --------->AtLEC2 xxxxxxxxxxxx>smallRNA(le3)<---------ANAC58<---------YAB1 --------->ICU4                --------->MYB46(3) >smallRNA(si3)  --------->YAB1   <---------YAB1  <------ZmHOX2a(1)             <-----------HVH21----   tggtgaacgatgcatttaattttaacgtggggtttgatgataactatcatcaggatggtagttatcagaatgtggaagaagcggtcagtaaccattcaaa  13808800  Previous    Next  AGI:  At5g35606.1    Description:  transposable element gene. CACTA-like transposase family (Tnp2/En/Spm), has a 9.5e-133 P-value blast match to GB:CAA40555 TNP2 (CACTA-element) (Antirrhinum majus) Range:  from: 13808310    to: 13811468    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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