Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    =                                                                                                    <                                                                                                    -                                                                                                    -                                                <---------GLK1(2)         <---------ZAT18        ----                                          --------->ANAC58                --------->ZAT14       -----                       <----------DOF2    --------->ANAC58         ------>ZmHOX2a(2)            <----             --------->RVE1(1)         <------NtERF2             <---------ARR11(3)             <----         --------->AHL20(2)           ------>NtERF2              --------->ARR11(3)<---------ANAC58 - ---------DOF2  <---------ETT(2)    <---------LBD16 --------------------->WRI1     <---------ANAC58 <   tctttctccaaaaaaatatcgacaacttttgtccaaactgcggcaagacacattctttgaaagttttgatctccattgcacaattgcttaagctctgaat  13775800            --------->HSFC1(2)            <---------HSFC1(2)            <---------At4g35610  ------>ZmHOX2a(1) <---------------AGL15 --------------->AGL15 -----------------AGL3           ------>NtERF2 ===========================================================================================MADS_MADS -----------------AG          --------->At4g35610 ---------------->AG          --------->ZAT2 ---------------->AGL2        <---------At4g35610                                         <----------DOF2 ----->KAN4(2)           <-------TEIL                                                    <---------ANAC58 ---->KAN4(1)          --------->ARR14(2)           <---------ATHB12                     <---------ANAC58 ------TaMYB80         <---------ARR14(2)   <-------TEIL                             <---------ANAC58 -----KAN4(1)       <---------MYB59        --------->ARR14(1)                        <---------ANAC58 ---------------->AGL1------>MYB46(1)     <---------GLK1(2)                 <---------------AGL15 -----------------AGL1------>MYB83        --------->ARR11(1)               <-----------------AGL2   attcctcatatggaagcttataccaaattcgttgctgccaaatagattcgttcaatgactccatcaaattagtcaatactacttgtggtttgctttcaag  13775900                           <----------DOF2                           --------->TOE1(3)                           --------->TOE2(3)                      <---------MYB52(2)                    --------->ZAT14                      <------------MYB.PH3(2)           <---------ALFIN1                            -                      <---------MYB59                  --------->MYB46(3)                 --------->ZAT14                 --------->YAB1                 ---------->DOF2                           <---------ZAT14               ----------->RAV1(1)           ----------->RAV1(1)                          --------->At4g35610            ------>ZmHOX2a(1)               --------->REM1(1)                    ------->TEIL    ----   gctgagaatacctcctccaacataactaactttaatcccattctctacaacaaagttcccaccgtagtagcattgaaaaactgcatcttcagtgctgaat  13776000                                                              <---------ANAC55(2)                                                              --------->ANAC55(2)                                 <---------AHL20(2)         <-----------GT1                      <---------ANAC58                      --------->AHL20(2)         --------->DAG2   ----------->HVH21             <---------AHL20(2)        ---------->DOF2 <---------MYB46(3)              --------->AHL20(2)  ----------->GT1     <-------GAMYB                    --------->AHL20(2) --------->DOF2       <---------ANAC58           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              -- ----->YAB1          <---------MYB46(3)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <--------   aagaaagaaataaagtgagtttttggttgtgacattttatcgaacacttggtgttcataaaattacatatcgcttatcaactaaaaaaactccacaatct  13776100                                                   --------->ANAC58                            ------                                        <-----------GT1                                     <--------                                        --------->YAB1                                 <---------AHL20(2)                           <---------ICU4          --------->ANAC58                   --------->AHL20(2)                        --------->GLK1(1)          --------->ANAC46             <---------MYB59------ ------->At4g35610      <---------GLK1(1)     --------->ZAT14 --------->ATHB12  --------->TOE1(3) -GLK1(2)         ---------->DOF2   <---------AHL20(2)       <---------YAB1     --------->TOE2(3) ---   catctaaactatagaaataccaaaggaattcattacattttataacaatacactcgcaatttgatgatttgataaaaaaaaacctaaattttataaacca  13776200                                                                                             <-------                                                       --------->GLK1(1)                     <-------                                                       <---------GLK1(1)            --------->ANAC46           <---------ICU4                        <---------ZAT2                     <---------YAB1     <---------AtLEC2                            --------->At4g35610                --------->ANAC58 --->TOE2(3)                               --------->GLK1(2)                        --------->ANAC58 ---GT1 --------->YAB1   *TSS    ------------>CBF<---------At4g35610             <---------REM1(2) --->TOE1(3)  <-----------GT1  ------>ZmHOX2a(1) --------->ZAT2              --------->ARR11(3)  ---- ------>AHL20(2) --------->TOE2(3)         --------->ICU4   ------>ZmHOX2a(1)<---------ARR11(3)  <---   taaatttgaatgaaaattacctcattttccttcctcacaatagagattatgagctggaactcctattccactaatataagctcttcacgatagatgctta  13776300                                                                 --------->O2                                                                 <---------bZIP60(1)               ---------->DOF2                                   <---------O2   <------------CBF             ---------->DOF2                  --------->bZIP60(1) --ANAC58  <---------ANAC46    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                             <---- --ANAC58 <------NtERF2    ----------->GT1           <----------ID1                             ===== ----->HSFB2a(2)         ---------->DOF2 ----------->GT1      xxxxxxxxxxxxxxxx>smallRNA(i)      ===== ------HSFB2a(2)     ---------->DOF2    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            ---------->ID1   tggaacattgtcgtcgtgaaagaaaaagaaagaaaaaagaagaaggtgatttaagacgacaaaaacgacgtcgttttacaaaaatttgtttgtctcttct  13776400                                   ------->MYC2                                   ------->PIF5                                   <-------MYC2                                   <-------PIF5                                  --------->O2<---------MYB52(1)                                  <---------O2--------->DOF5.7(2)                                  --------->TGA1a                                  ======================MYC_MYB                                  <---------TGA1a                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       =====================bZIP_bZIP                       =================================MYC_MYB                       --------->O2<-------MYC3                  <-----------TGA1                       <---------TGA1a--------->ANAC58  <---------ANAC46                       --------->TGA1a--------->ANAC58  --------->ANAC55(2)                       <---------O2------->MYC3         <---------ANAC58                       <---------ANAC58--------->At4g35610       <-----------HVH21                       --------->ANAC55(2) <------------AtMYB77 --------->DEAR3(1)                       <---------ANAC58<---------At4g35610     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                 <-----------HVH21=================MYC_MYB     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              <---------ANAC46    --------->ANAC46      <---------ANAC55(2)              <---------ANAC58    --------->bZIP60(2)   ----------->GT1              <---------ANAC58  <---------ALFIN1--------->MYB52(1)    <xxxxxxxxxxxxxxxxsmallRNA(s)            <-----------HVH21<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->ANAC58           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------DOF5.7(2)  --------->ANAC58           <---------bZIP60(1)  <------------OsbHLH66   <---------ANAC58           <---------O2<---------ANAC55(2) --------->MYB46(3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)<---           --------->O2============================MYC_MYB   <---------ALFIN1                    <--- ------DOF2--------->bZIP60(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)----------->HVH21              <--- ================================bZIP_DOF -------->P <---------ARR14(2)                    --------->ATHB12 ===========================================bZIP_DOF --------->ARR14(2)                   <---------YAB1   ttcatctaaaacgacgtcgtgtcatacgtggcatccacgtgagcaaccgttaacggtttcgtaacaccgtcacggcttaggcatgtattgacatgaatgg  13776500                                                                  <---------ANAC46                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                  <------MYB83                                                                  <------MYB46(1)                                                                 --------->MYB55(2)                                                           --------->MYB52(1)                                                          ------->GAMYB                         <----                                                         <---------MYB55(2)                     <----                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                       <----                                    <---------TOE2(3)    <---------MYB52(2)                <---------At4g35610                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       --------->At4g35610                               --------->MYB52(2)        --------->MYB46(3)                <---------ZAT2                               <---------MYB46(3)      ----------->RAV1(1)      <xxxxxxxxxxxxxxxxxxxx                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ------ANAC58              <------MYB46(1)  --------->ARR14(2)   <---------MYB46(3)        --------->ZAT2 ------ANAC58              <------MYB83     <---------ARR14(2) <---------MYB52(1)      <---------DAG2 ------ANAC46              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------MYB55(1)     <----------DOF2   tgtgagtttgggatttgaatttgaaaatttggtttgttaatgtatggatttgcacaacaacaaacgttgggtatgaattgaacatactactttagctggg  13776600                                  ---------->DOF2                           <---------ICU4                                                 <--------ATHB1                        <---------ICU4                                                    -------->HAHB4                        <--------HAHB4                                                    <---------ICU4           <---------MYB52(1)    ------>ZmHOX2a(1)                 <---------TOE2(3)     --------->AHL20(2)     ----------->HVH21  --------->ATHB51                         --------->ICU4          <---------ATHB51 -----ANAC58           <---------YAB1               <---------AHL20(2)                   <---------AHL20(2) -----ANAC46           --------->ICU4              --------->AHL20(2)          --------->MYB52(1) -----ANAC58         --------->YAB1             ----------->GT1 <---------YAB1--------->ICU4 xxxsmallRNA(fl3) ------>ZmHOX2a(1)          --------->CCA1(2)<---------ZAT6--------->YAB1--------->ATHB51   gtatgaaatgaccgtttttcctagcataattagtcctaaagatgaagataagataaaattgttagtattaatgaatagtcataactgataaataattgta  13776700  Previous    Next  AGI:  At5g35575.1    Description:  transposable element gene. Mutator-like transposase family, has a 7.5e-41 P-value blast match to GB:AAA21566 mudrA of transposon=""MuDR"" (MuDr-element) (Zea mays) Range:  from: 13773358    to: 13776225    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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