Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ------>ZmHOX2a(2)                                       ====================HOX2a_HOX2a                                      <------ZmHOX2a(2)                                      =====================HOX2a_HOX2a              ----------->HVH21                                     --------->ARR11(3)                             ------->GAMYB                                     <---------ARR14(2)                            <---------MYB52(2)                                     <---------ARR11(3)       <----------DOF2      <------------AtMYB77                                     --------->ARR14(2)   --------->ANAC58        <---------At4g35610                                --------->MYB52(1)        --------->ANAC58        --------->ZAT2                                ----------->RAV1(1)     --------->MYB46(3)        --------->At4g35610                       <---------ARR14(2)           ------>ZmHOX2a(1)         --------->ANAC58       ------>ZmHOX2a(1)   --------->LBD16         --------->TOE2(3)          --------->ANAC58 ->HVH21               --------->ARR14(2)     --------->At4g35610             --------->ANAC46   agtttcttcctctctctcaaactaaaatccgagacaacagatcccatcggcttcctcaacaagcctttcacaactctctctcgcaactgaccataagtct  13770300                                        ----------->HVH21                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                      --------->At4g35610                                     <---------AGP1                                     <---------ARR14(2)                                     --------->ARR14(2)                              --------->AtMYB61                              <---------ALFIN1                             --------->MYB46(3)  ---------->DOF2                           --------->ANAC46   --------->LBD16                                      <-                        --------->ARR14(2)  <---------LBD16                                      ----                        <---------ARR14(2) ------->TEIL                ------>ZmHOX2a(2)         ====              <---------At4g35610    <-----------ARR10               --------->ARR11(3) <--------P --              --------->At4g35610   <---------CCA1(2)                --------->AGP1    --------->At5g28300   gatgttttctattgagagcagaatcaaatccaccactcggatctgaaccggaagagccagaaacaatctctgatctaggtgaattaagcggtagatcgat  13770400                                                                                --------->ATHB51                                                                            <---------YAB1                                                                 <---------TGA1a--------->ATHB12                                                                 <---------ANAC46                                                                 --------->O2--------->YAB1                                                                 --------->TGA1a<XXXXXXXXXXXXXXXXXXXXMIR834                                                   ------>NtERF2 <---------O2<---------ICU4                                                   --------->ABI4(1)        --------->ICU4                                                  --------->DEAR3(1)      <--------HAHB4                                      <---------MYB46(3)         ====================================                                      <---------REM1(1)<---------MYB52(2) --------->YAB1       ------->TEIL                   <-----------RAV1(1)    --------->DEAR3(2)<---------YAB1 --------ANAC55(2)           <---------MYB46(3)   --------->ANAC46       <---------YAB1          ---- -->ZmHOX2a(2)            --------->ALFIN1        --------->DREB2C(2) --------->ICU4             <--- ============================HOX2a_HOX2a       <---------ALFIN1  ==================================== ------->ANAC55(2)    <------ZmHOX2a(1)      <-----------HVH21--------->DEAR3(1)<---------ICU4   <---   ctcgtgatgaactctcaaggtcgaggaagtgttgttgttgttgttgccatcaccgccactaacaccgacgtgagtattattattattgctactactacca  13770500                                                                          <---------TOE1(3)                                                                          <---------TOE2(3)                                                                          <---------------AtSPL8                                                                          <---------------AtSPL3                  <--------ATHB1                                     --------->ICU4        <------NtERF2                                             ----------->HVH21        --------->LBD16                                         <---------bZIP60(1)        ------>NtERF2                                           <---------ANAC55(2)       --------->DEAR3(1)                                       <---------ANAC46              <------    --------->DEAR3(1)                                          <---------ANAC58           --------->DEAR3(1)    ------->GAMYB --------->ATHB12                              <---------ANAC58          --------->MYB46(3)   <---------ABI4(2)                                            --------->ANAC55(2)      ------>NtERF2   <------------AtMYB77                                         --------->O2            <---------ALFIN1   --------->DEAR3(2)                                           --------->bZIP60(1)     --------->DEAR3(1)   --------->MYB46(3)                                           <---------TGA1a    <---------ATERF1(1)   --------->ATERF1(1)                                          --------->TGA1a--------->ANAC46  <---------ATERF1(1)                                           <---------O2   --------->ANAC58    <- <---------ARR14(2)                                            ----------->STF1--------->ANAC58    -- --------->ARR14(2)                                          ----------->TGA1 --------->SPL7<-------- ===========MYC_MYB <---------WOX13(1)      ----------->GT1  --------->WRKY12 <-------TEIL--------->DEAR3(2) ----->At4g35610 <---------YAB1             --------->LBD16<-------GAMYB  --------------->AtSPL8   <- ------At4g35610 --------->ICU4            ----------->GT1 ===============MYC_MYB --------->DEAR3(1)< ===============MYC_MYB                   <---------LBD16 <---------MYB46(3)<---------SPL7<------NtERF2 ------LBD16    <---------WOX13(1) --------->ATHB12    <------ZmHOX2a(1)  --------------->AtSPL3-----   gcggaaccgccgcgtttgaatgattgagcacgacgagtcattggaccggaaaatcgaggactgttgacgtgatgttgaggtacgccatcgccaccgtcgt  13770600    <------NtERF2 --------->ATERF1(1) ---ANAC46 --------DEAR3(1)              --------->MYB52(2)                                       *TSS ------->ALFIN1                <---------MYB46(3)                                       --------->YAB1 ---HVH21                      <-----------RAV1(1)                            <---------CCA1(2) --------AtMYB61<---------ARR11(3)                    <----------ID1      <---------ANAC58       ---- ---------MYB46(3)     <<<<<<<<<TBF1     <----------DOF2                  <---------ANAC46      <---- ---->ALFIN1    --------->ARR11(3) <XXXXXXXXXXXXXXXXXXXXMIR391            <---------ANAC58<---------YAB1   ggtggtggcccatttcaagctcttcttcttcgattgttgctatcttttttgtgaagaagacgaagaattggtttttgcgtttatcttcaattttgatttt  13770700                                                       <---------ANAC58                                                       <---------ANAC58                              <----------DOF2          <---------ANAC46         <------------CBF ------>ZmHOX2a(1)      --------->ARR11(3)  <---------AHL20(2)  <-----------GT1            <---------ARR11(3)      <---------At5g28300        < -------->CBF     ---------->ID1               ----------->ARR10  <---------ZAT6  <-----------GT1   - -------GT1     <-----------RAV1(1)  --------->ALFIN1 ---------->ID1    <-----------GT1  <---------AHL20(2)   tcaatttatcgaattgttttgttgtttcctctctttcaagtgggaaactgagattttgcgttttgttagtgtttttactgtttttctctgttttattttg  13770800                        <---------ZAT6               --------->YAB1                      <------MYB83               <---------ICU4                      <------MYB46(1)              <---------YAB1                       ----------->GT1           <---------AHL20(2)                     <---------AtMYB61           <---------YAB1                         <---------MYB46(3)        --------->AHL20(2)                       <---------WOX13(1)        <---------AHL20(2)                     --------->ATHB12       <---------AHL20(1)             --------->ZAT14       <---------AHL20(2)             --------->ZAT18                         <---------------AtSPL8       --------->AHL20(2)             <---------ZAT14                         <---------------AtSPL3 ---------ETT(2)  <---------AHL20(2)  <---------ZAT18                   ----------->GT1 -------->ETT(2) <---------YAB1   --------------->AtSPL8            --------->AHL20(2)------->TEIL   tgtcgacaatttttttattattatttgtgttattacatagtacacttatggattggtgaataaacaaaaaaaaaatgtgaatagtacgaatttgtcgagt  13770900                             <-----------HVH21                          --------->At4g35610                                                --------                          <---------ZAT2                                                     --------                          --------->ZAT2                                        --------->YAB1                          <---------At4g35610                               <---------ARR11(3)                      <---------ARR14(2)                ------>ZmHOX2a(1)   --------->AHL20(2)             <---------AHL20(2)                     --------->ANAC46      --------->ANAC58   --------             --------->AHL20(2)             --------->AHL20(2)            --------->ANAC58  <--------    --------->MYB52(1)--------->ARR14(2)    <---------AHL20(2)            --------->ANAC46<----------   tgggaccaagggaaattaaacgagtatcagctgtcaagctgttcaaataaatacactcctctagtttctatactacaagaaattatagcatattaccata  13771000                                   --------->GLK1(1)                                          <------                                   <---------GLK1(1)                                          <------ ---------->DOF2               <---------ANAC46                  <---------ZAT6              <------- ->TOE1(3)           --------->ANAC58                            ----------->GT1       <---------ARR14(2) ->YAB1              --------->ANAC58                        <---------SPL7            <---------GLK1(2) ->TOE2(3)       <---------HSFB2a(2)                       --------------->AtSPL3      --------->ARR14(2) -YAB1           --------->HSFB2a(2)  <-------TEIL      --------->ALFIN1           ------>ZmHOX2a(2) -GT1         --------->GLK1(2)--------->ETT(1)       <---------ANAC46           --------->ARR11(3)   aacaaaagcgttggaaattctggacgaaatatgtcggaaattcgttgaaaaaactagggtggacgtactgtgaatttcagtttgatctcgattcgccttt  13771100      <---------TOE1(3)                                                    <---------MYB52(1)      <---------TOE2(3)                                                  <---------ANAC46     <---------At5g28300                                              --------->ARR14(2)    <-----------GT1                                       <<<<<<<<<<MYB80<---------ANAC58 ------------------ANAC81                                <------MYB83 <---------ARR14(2) ----DOF2         --------->YAB1                         <------MYB46(1) <---------ANAC58       <---- --DAG2     <-----------GT1 --------->TOE2(3) <----------DOF2      <---------TOE2(3)   <-----------GT1   ttagttttacggtttttcaattttaaaaaaacttaaaccatataaaaacttttgtaatttggtttgattacggttccgttttatagtttttactgatttt  13771200  Previous    Next  AGI:  At5g35570.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37980.1); similar to Os09g0442900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063294.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15763.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 13766941    to: 13770688    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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