Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------YAB1                                                                         <------     --------->AHL20(2)                                                                     <--------     --------->YAB1      <---------AHL20(2)                                               <---------AHL20(2)    --------->ICU4       --------->AHL20(2)                                              --------->AHL20(1)    <---------YAB1 ----------->RAV1(1)       --------->ARR11(3)                    ------>MYB83  --------->YAB1  --------->DREB2C(2)        <---------ARR11(3)    <---------YAB1  ------>MYB46(1) --  <---------ICU4 --------->DEAR3(2)        <---------AHL20(2)     --------->AHL20(2)     <---------AHL20(1) <---------ATHB12--------->MYB46(3)       --------->AHL20(2)--------->TOE2(3)     ----------->RAV1(1) ------>ZAT6   --------->MYB52(1)   ----------->GT1      <-----------GT1        --------->MYB46(3) <-   ccactaattataaatccaaaccgacatataattttgtttagttataaaatctaaactataaacctcatttttataaacccaaaccaacatatatattttt  13718200                                                                 --------->AHL20(2)                                                                 --------->YAB1                                                                <---------YAB1                                                             <---------AHL20(2)                                                             --------->AHL20(2)         <---------ARR11(3)                                 --------->AHL20(2)         --------->ARR11(3)                             <---------AHL20(1)       <---------AHL20(2)                               <---------AHL20(2)      --------->AHL20(2)                                --------->AHL20(2)       --------->AHL20(2)   --------->YAB1                                       --------->AHL20(1)     --------->TOE1(3)   --------->AHL20(2)                                  <---------AHL20(2)      --------->TOE2(3)  <---------YAB1                                       --------->AHL20(2)      <----------DOF2 ---AHL20(2)                   --------->YAB1      <---------AHL20(2)  --------->ARR11(3) -AHL20(2)                  <----------DOF2        --------->AHL20(2)  <---------ARR11(3) ------->AHL20(2)--------->TOE1(3)              --------->AHL20(1)   <---------AHL20(2)      -------- --------AHL20(2)--------->TOE2(3)              <---------AHL20(1)  --------->AHL20(2)    <----------DOF2   tttaattataaaatctaaaccttaaatactctttaataaactcaaactaatatataattttatttaattataaaatctaaactttaaatactcttttata  13718300                                                                                                 ----                           --------->YAB1                                                        ----                           --------->AHL20(2)                                                    ----                           -------->HAHB4                                                       -----                          <---------YAB1                                                       ------                       --------->AHL20(2)                        <-----------ARR10          <--------                       <---------AHL20(2)    <----------DOF2     --------->GLK1(2)     <---------YAB1             --------->AHL20(2)  <-----------ARR10              <---------GLK1(2)     --------->AHL20(2)             <---------AHL20(2)  --------->GLK1(2)          ---------->DOF2           <-----------TBP ->YAB1     --------->AHL20(2)  <---------GLK1(2)         --------->YAB1         ------>ZmHOX2a(1)  -   aactcaaactgatatttaattttgtttaattatagaatctaaactctctttttttttttatcaaaagaatctaaactctattcctcatttttataaacca  13718400                       --------->ALFIN1                     --------->ALFIN1                     <-----------RAV1(1)                    <-------MYC3                    <-------MYC2                    ------->MYC2                    ------->MYC3                   <---------TGA1a                   <---------ANAC55(2)                   <---------ANAC46                   ================================bZIP_DOF                   =====================bZIP_DOF                   =====================bZIP_DOF                   ================================bZIP_DOF                   --------->ANAC55(2)      <---------AHL20(2)     <---------DAG2 ----->MYB52(1)    --------->O2                      <----------DOF2 -->MYB46(1)       <---------O2                      --------->TOE2(3) -->MYB83          --------->TGA1a                 <---------YAB1 ---->MYB55(1) <----------DOF2<----------DOF2     <---------ARR11(3)               --------->AHL20(2) --->AtMYB61   ==============bZIP_DOF             --------->ARR11(3)               <---------AHL20(2) ---GT1<---------AHL20(2)    <----------DOF2 <-------TEIL            <----------DOF2    <----------DOF2 ---------->GT1<-----------HVH21        ---------->DOF2      <---------MYB52(1) --------->YAB1   aacggttttttaatgggcttcacgtgttgggccttttgttttgaaagttcattatctttaactgttatgggctttctattagtaataaaacttttgtttt  13718500                                                                                                -----                                                                                     <---------GLK1(1)                <---------YAB1                                                    <---------TOE1(3)         <------------CBF        <-------GAMYB                        --------->MYB52(1)        <----       <-------TEIL          ------------>MYB.PH3(1)                --------->MYB46(3)          ----- <---------ANAC58            ------------>AtMYB77                   <---------MYB55(2)          <---- <---------ANAC58         ---------->DOF2                      ------>ZmHOX2a(1)  <---------TOE2(3)   ctgtcttggttcattgttatgaaattcaaaaagacagttactgaaattcaacttctagtcttctcctccaactactggcaaattagggtttctgagttcg  13718600         --------->At4g35610         <---------At4g35610                                                --------->ARR11(3)    <-------TEIL                                                            <---------ARR14(2) --------->HSFB2a(1)                                                        --------->ARR14(2) <---------HSFB2a(1)                                                        <---------ARR11(3) <----- --------->HSFC1(2)                                                         <---------GLK1(2) ------- <---------HSFC1(2)                                                     ------>ZmHOX2a(1)     ------- ---->HSFC1(1)                      --------->DAG2                     --------->TOE2(3)  --------->ANAC58 -----HSFC1(1)                     ---------->DOF2                  <---------ARR14(2)    --------->ANAC58 ---->HSFB2a(2)                --------->ANAC58<---------ZAT6 ------->TEIL----------->ARR10  -------- -----HSFB2a(2)----------->GT1 --------->ANAC58--------->ALFIN1     --------->ARR14(2) --------->ANAC46   agaaaattcgtagcagagtgtgaaaatggaaggaagcaaaagcgaggcagtgttcgattccatgaatctaaatcctcagattttcatcaacgaagcaatc  13718700                          <----------DOF2        ---------->ID1   --------->LBD16     ------>MYB83              <---------CCA1(2)   <-----------HVH21   ------>MYB46(1)        <-------TEIL                                       <--- ----ATHB12      --------->ETT(2)            --------->ARR14(2)                                  <--- -->ANAC58       <---------ETT(2)            <---------ARR14(2)                        ----------->GT1 -->ANAC58--------->ARR11(3)                <---------MYB52(1)      ---------->DOF2 --------->MYB52(1) ->WOX13(1)     --------->DDF1           <---------LBD16      <-----------RAV1(1)  ---------->DOF2   aactccgtcgaagattatgtcgaccaagcttttgacttctatgcccggttcgtctctctcgctattgttgcaaagcttattctaacaaagggttttattt  13718800                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  --------->ARR14(2)                                                  <---------ARR14(2)                                                  <---------AGP1                                                  --------->GLK1(2)       <----------DOF2                                                  <---------ARR11(3)      <---------DAG2                                                  --------->ARR11(3)   --------->ANAC58 ---MYB83                      <---------CCA1(2) <------ZmHOX2a(1)     --------->ANAC58 ---MYB46(1)              ------->TEIL       ---------->DOF2  ---------->DOF2               <--------   ggttcttacttacatttttgcagtgatgcatccaaatctctcaaaatcaaaggatctgataaacaaaagtcacaagctttatcaaatgtgagttttggtg  13718900                                                                 <---------ANAC58                                                            <---------ANAC58                                                            --------->MYB52(2)                                  <-----------GT1           <---------ANAC58  ----------->GT1   <---------GLK1(2)               <---------ANAC58 <---------TOE2(3) <---------At4g35610              <---------ANAC58 -AtMYB61          --------->At4g35610      <---------TOE2(3)    <---------ANAC58   attttggttaattctttgttcagcttcttactcttgttacatttttagggtattgctcgtgttcgtggtttgctactatctgtaatcgacaatcgtttga  13719000                                                   <---------ZAT6                                               <---------GLK1(1)                                    --------->ARR14(2)        --------->ANAC58            <---------ARR14(2)                                          <----        --------->ANAC58           --------->GLK1(1)                                          <------      ---------->DOF2  --------->GLK1(2)   <---------WOX13(1)   --------->ALFIN1              -------  <---------ANAC46    <---------GLK1(2) ------>ZmHOX2a(1) ---------->DOF2           ------>ZmHOX2a(1)   aattgtgggaaagctattctcttcgattctgtttcgcagttcctgatggatttgtgttaccaaagagtgtgagtctcttctatgtccttcattgtctcgt  13719100  Previous    Next  AGI:  At5g35520.1    Description:  kinetochore protein-related. similar to kinetochore protein [Arabidopsis arenosa] (GB:BAF63146.1); contains InterPro domain Mis12; (InterPro:IPR008685) Range:  from: 13718626    to: 13720719    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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