Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 <---                                                                                                 ----                                                                                    <---------TOE2(3)                                                                                   <---------ICU4<---                                                                                  --------->ICU4 <---                                      --------->TOE2(3)                          <---------AHL20(2) -           --------->AtMYB61  <----------DOF2                                   --------->YAB1   <---        <-----------GT1    <-----------GT1              <---------AHL20(2)     <---------YAB1   <----   ----------->GT1   <----------DOF2  <----------DOF2   --------->AHL20(2)   --------->YAB1     <---- ------->DOF2--------->ANAC46 <---------DAG2       <-------TEIL        ------>ZmHOX2a(1)----------->GT1   taaagaagttataccacagcattctttttttactttttttctttaatacaagatgcaattaaacaaaatgttcctctaactataataatgtagaaaaata  13689400                                                                      ------>ZmHOX2a(1)                                                               --------->ALFIN1                                                              <-------MYC2                                                              -------->ABF1                                                              ------->MYC3                                                              <-------MYC3                                                              ------->MYC2            --------->HSFB2a(1)                               <-------PIF5            <---------HSFB2a(1)                               ------->MYC4            --------->HSFC1(2)                                <-------MYC4            <---------HSFC1(2)                                ------->PIF5   --------->ANAC58                                          >>>>>>>>>>HY5   --------->ANAC46                     <---------HSFC1(1)   >>>>>>>>>>AtMYC2   --------->ANAC58                     <---------HSFB2a(2)  --------->ANAC55(2)  <---------ZAT18                       ------>ZmHOX2a(1)    >>>>>>>>>>ABI5  --------->ZAT18            ---------->DOF2                 <---------TGA1a  --------->SPL7             ==========================================bZIP_DOF ------ANAC58            --------->ANAC58                    <---------ANAC55(2) ------ANAC46            --------->ANAC46                    --------->O2                        ---- ----->ANAC55(2)         --------->ANAC58                    <---------O2                       <---- ------ANAC58           --------->LBD16 --------->HSFC1(1)   --------->TGA1a                    ----- ------ANAC55(2)        <---------LBD16 --------->HSFB2a(2)  <---------bZIP60(2)              <------ -------->REM1(2)<---------HSFB2a(2)--------->ZAT18          ======================================bZIP_DOF ------ANAC55(1) --------->HSFB2a(2)<---------ARR14(2)       ======================================bZIP_DOF ---TEIL <------ZmHOX2a(1)--------->LBD16                  <---------ALFIN1             ---------->DOF2 -------------------TaNAC69(2)      <---------PCF2      <---------ETT(2)              <---------YAB1   cgtgtacgctaggaaatttctcgacccgcgcaaaagagggtcctagaagtttcaactttcgacacgtggctccttctcagtctctcttattaaagtcttt  13689500                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                               ------                                    <---------AHL20(2)                                         ======                               --------->AHL20(2)                                              <-----                      <---------AHL20(2)                                                      -------      --------->YAB1  --------->AHL20(2)                                                      <------     <---------AHL20(2)--------->MYB52(1)                                                   <-------- <---------AHL20(2)  --------->ICU4 <-----------GT1                                      <---------ICU4 --------->AHL20(2)  <---------ATHB12        <------ZmHOX2a(1)                          <---------YAB1 ----->AHL20(2)    --------->WOX13(1)  <----------DOF2         --------->GLK1(1)        ------>ZmHOX2a(1) -----AHL20(2)  --------->ANAC58--------->AHL20(2)             <---------GLK1(1)        --------->ICU4 ---->AHL20(2)  --------->ANAC58<---------AHL20(2)        <---------At4g35610     --------->DAG2<---- ----DOF2    ---------->DOF2   <---------AHL20(2)    <-----------GT1             ---------->DOF2-----   aaattatataatcaccaaaggcaattaatggaattaatttactttgaggactaatattccatctgatttcccaagataaaacataaagtccttattactt  13689600            <---------ICU4            --------->ATHB51            <---------AHL20(2)            -------->ATHB1            -------->HAHB4            --------->ATHB12           <---------ATHB51           <---------YAB1      ----------->GT1     ------->TEIL  <---------YAB1 ------->HAHB4                                                                            <---------YAB1 ---------ICU4                          <----------DOF2                                 --------->ATHB12 -------->YAB1                          <---------DAG2                                 --------->ICU4 ------->ICU4                        <---------ALFIN1                                  <---------YAB1 --------ATHB51                   <---------ICU4                                     <---------ICU4 --------->AGL15                  <-----------GT1                                    --------->YAB1 =====================================================================MADS_MADS      -------->HAHB4 ----------AGL15                  --------->YAB1                                    <---------ATHB51 -->ANAC55(2)                  --------->WOX13(1)               --------->MYB52(1)  --------->ICU4 ---ANAC55(2)                 <---------AHL20(2)             --------->YAB1       --------->YAB1 ---GT1    --------->ICU4     --------->AHL20(2)          --------->YAB1 ---------->DOF2<---------ICU4 -----AHL20(2)               --------->ICU4           =============================================== ---->AHL20(2)            --------->AHL20(2)          <---------------AGL15  ----------->GT1   aattatgaatgtaattattggattacatgtaattaatcaccactttataaaactgaacaaaaatagtaacgaatataaagagtttaataatgatttttgg  13689700                                         --------->ARR14(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                                         <---------ARR14(2)                                 ----------->GT1                           --------->LBD16   ------>ZmHOX2a(1)                          <---------ANAC46   --------->LBD16                         <---------LBD16--------->RVE1(1)                    <---------AHL20(2)  --------->CCA1(1)              ------>MYB83<---------------AGL15                                 <----------DOF2              ------>MYB46(1)  ---------->DOF2                           <---------GLK1(2)     ------         --------->REM1(1)--------------->AGL15                          --------->ARR14(2)    ------    xxxxxxxxxxxxxxxx>smallRNA(i)--------->DAG2                       *TSS<---------ARR14(2)  -------- =========================================MADS_MADS ----------->GT1  <---------LBD16    <----------ID1   gtcattttccttcaccaaatttttaattccgcataaagtaaaatatcctgaaaacagaaaaattcagtgttttcggattctcctttaaaaacgacaaaag  13689800                       <---------ICU4                       --------->YAB1                       --------->ATHB51                       <------------ATHB5                       <--------ATHB1                      <---------ATHB12                      --------->ICU4                      <---------ATHB51                 --------->ANAC58                 --------->ANAC46                 --------->ANAC58                                                                  <-         --------->GLK1(1)                <-------TEIL                                         <----- --->ANAC58      --------->RAP2.6(2)     --------->CCA1(2)                 <-------GAMYB      ------- --->ANAC58  ----------->HVH21   --------->MYB52(1)                       ----------->GT1     <------ -->DOF2 <---------GLK1(1)  <---------ANAC46                        <---------MYB46(3)    ---------->DOF2   catctacagagaaatctgaccgcaataatggcgaataacgaagattcaaactccaatggactagactcgtttgatgctgttaaacaacgtttcaaagatc  13689900         ----------->RAV1(1)        --------->REM1(1)       <-------TEIL        <-----------GT1 ---------->DOF2   <-------TEIL -----ZmHOX2a(2)  --------->ARR14(1)                ---------->ID1             <---------ZAT18 -ZmHOX2a(2)     --------->ARR14(2)                <------------------------ANAC81 -->ARR11(3)     <---------ARR14(2)            <----------DOF2                 --------->ZAT18 ---ARR11(3)     <---------GLK1(2)    <---------TOE2(3)                   <----------DOF2           >   gatcaaaggtacaacatcagattcgattttcaccatttttgatgtttctcttttgttccaattttgttgattttgactttgtggaccaattgtttttgat  13690000                                                             ------>ZmHOX2a(2)                                                            <------ZmHOX2a(2)        ------>ZmHOX2a(2)                                                           --------->AGP1           <------ZmHOX2a(2)                                                         ----------->ARR10         <---------ARR11(3)                                                      <-----------HVH21            --------->ARR11(3)                                                     <---------ANAC58            <---------YAB1                                                     <---------ANAC58    --------->ANAC58                  --------->TGA1a                    <---------ANAC55(2) --------->ANAC46     -------     ---------->DOF2       <---------MYB46(3)        >>>>>>>>CAMTA3      --------->ANAC58     -------     =======================bZIP_DOF       ----------->GT1 --------->ARR11(3) <---------MYB52(1) >>>>>>>>WRKY18   <---------TGA1a       --------->MYB52(1) <---------ARR11(3)<---------RAP2.6(3)   tttgacagaaagttgttcagacgagagagttgttgtctaaacaagcggtacaaacgcgtgagatcttatcgaaacaagccgttaagatcgctaaacaagc  13690100                             <------MYB46(1)                             <------MYB83                            --------->MYB59                            <---------AtMYB61       <---------ICU4                         <------MYB83                       <---------TOE1(3)            --------->YAB1                         <------MYB46(1)     --------->TOE1(2) --------->DAG2              <---------ATHB12                    --------->ATHB12 -->ANAC58             <---------TOE2(3)  <---------GLK1(2)<---------YAB1    <<<<<<<<<<MYB80 -->ANAC58    <-------TEIL<---------MYB52(1)     --------->WOX13(1)      <----------DOF2  --------->MYB59   cgaagaacatgagagattcatcaataaggttaggtttctctcttgattcttcaatcatgttttgattttaagttactttggtttgaaaatgtttggttct  13690200                                     --------->ARR14(2)                                     <---------ARR14(2)                                <---------ANAC58                                <---------ANAC58                                <---------AtLEC2                            <---------ANAC58                            <---------ANAC46                            <---------ANAC58                          <------MYB46(1)                          <------MYB83            ----------->HVH21<---------ZAT18       ---------->DOF2   <---------AtMYB61                                                   <------- --------->ICU4         <---------MYB52(1)               ------>ZmHOX2a(1)       --------->ARR11(3) -   gtaatgttttaaaggtgacacatctcgttggtgtgcttggatttggaggtttttgtttcctacttggtgcaagtgagttcaaagaaattgtgtttttttt  13690300  Previous    Next  AGI:  At5g35460.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95300.1); contains domain Acetyl-CoA synthetase-like (SSF56801) Range:  from: 13689769    to: 13691969    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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