Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------ANAC58                          <---------ANAC46                                  <---------ANAC58                        <----------DOF2       -----          ---------->DOF2    <---------ATHB12                            <---------ANAC58       <----   <---------YAB1           ------>MYB46(1)                  <---------ANAC58                -------- <-----------GT1            ------>MYB83 --------->ZAT6<---------ATHB12  <---------ANAC58    <------- -------->ZAT14          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <---------MYB52(1)      <------- ---------ZAT14         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------ANAC58           <-------TEIL   agtttactattcaaaagagactggaacaccaatcttgcttccaactctacgaagacaatcgttccatgtctgtttgcttcttggaatagatgcaatattt  13621600                                                                     <----------ID1                                                                   <-----------GT1                                                               --------->AHL20(2)                                                               <---------AHL20(2)                                                               <---------AHL20(1)                                                        --------->YAB1                                                       <---------ATHB12     --------->TOE1(2)                                --------->ARR14(2)   <-------TEIL      --------->ARR11(3)               <---------ARR14(2)    --------->TOE2(3) ---->AHL20(2)       <---------ARR11(3)              --------->WOX13(1)  ----------->RAV1(1) -----AHL20(2)       <---------GLK1(2)        <---------ICU4   <---------ARR11(3)     --------->ZAT6 ->AHL20(1)        ----------->ARR10         <---------ATHB12  --------->ARR11(3)   <-----------HVH21 --AHL20(1)        <---------TOE2(3)       --------->WOX13(1)  --------->AHL20(1)<xxxxxxxxxxxxxxxxxxx --ARR11(3) --------->YAB1    --------->WOX13(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       ------   ttatattcatacgatgagaataagattttcatcaatccaagatggcaatctttgccaatcttcaatatattacgacaacatttatctgtcactaggtttg  13621700                    <---------ARR11(3)                    --------->GLK1(2)                    --------->ARR11(3)               --------->LBD16              --------->HSFB2a(2)              --------->HSFC1(1)        <---------ZAT2              <---------HSFB2a(2)       <---------GLK1(1)       --------->HSFC1(1)          ------->MYC2                  <---------At4g35610     --------->HSFB2a(2)                <-          <-------MYC3             <-------MYC3           --------->ANAC58                         --          <-------MYC2         --------->LBD16            --------->ANAC58                         --          ------->MYC3       <---------LBD16           ------->GAMYB                               <-       <---------ALFIN1    --------->AtMYB61          --------->ANAC46               <---------ANAC58   --------->MYB46(3)      --------->DEAR3(1)         --------->ANAC58               <---------ANAC58 xxxxsmallRNA(s2)   <-----------ARR10   --------->ZAT2--------->ANAC58  --------->YAB1<xxxxxxxxxxxxxx --->MYB52(2) <---------HSFC1(1)   ------->MYC3<----------DOF2  <---------HSFB2a(2)  <---------ANAC46   tttcatccaacacgttctggaaaatctcacctccgcatatggagctcggcttttcaacgcaagcctctagaaaatcatactgtttttgcgagtaatgggg  13621800                                 <---------DAG2                                 <----------DOF2                      ----------->GT1                     <---------MYB46(3)               xxxxxxxxxxxxxxxx>smallRNA(s)                    <---------ARR11(3)               -----  <-------TEIL----------------->AGL1                          --------->REM1(1)       <---------AHL20(2) --------HSFB2a(1)  <---------ANAC58                  --------->CCA1(2)        --------->HSFB2a(2) ------->At4g35610  <---------ANAC46                 <---------ARR14(2)        ------>ZmHOX2a(1)----- ------->HSFC1(2)   <---------ANAC58                 --------->ARR14(2)        --------->LBD16xxxxxxx --------HSFC1(2)  <---------LBD16                   --------->ARR11(3)      ----------->RAV1(2)----- xxxxxxxsmallRNA(se3)--------->LBD16                 <---------ARR11(3)  ------->TEIL--------->AHL20(2)   aagcttcatttcatattccattgcgggtgaaatagctttttcgaatggagttggagatatgactacatcttcatgtacctcctgggataaaattggacaa  13621900                                                          <---------YAB1                          --------->YAB1                --------->AHL20(2)           <<<<<<<<<<<<<<<<<LFY                         <---------AHL20(2)        <---------ICU4    <---------ICU4       <-----------GT1 --------->AtLEC2       --------->ANAC58   <---------GLK1(2)                          --------->CCA1(2) ----------->GT1        --------->ANAC46   <---------ARR11(3)                      <---------YAB1 ---->ANAC58            --------->ANAC58   --------->ARR11(3)                     <---------TOE2(3) ---->ANAC46        --------->CCA1(2)     <---------RVE1(1)                      --------->YAB1 xxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <---------WOX13(1) ---->ANAC58 <---------YAB1  <---------WRKY18(1)    --------->ICU4            <------------CBF    <--   gccatgtaaaacattacaatggatacaagcatgaccatgagaagagattttgccatatttatttttggttttggatgtaagattgatgatatgaaacaaa  13622000                                                             --------->YAB1                                                     <---------AHL20(2)                                                 ----------->GT1                                             <---------AHL20(2)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <------------CBF        ----------->GT1                      --------->AHL20(2)       <---------TOE2(3)         <----       <---------ARR11(3)               <---------WOX13(1) <---------YAB1<<<<<<<<<MYB98        ======       --------->ARR11(3)              <------------CBF  <---------AHL20(2)                    <-----   ---------->DOF2 ------------>CBF  --------->AHL20(2) --------->AHL20(2)                     ------ --------ID1       <---------ZAT18   <---------AHL20(2) <---------AHL20(2)<-----------GT1      ------   aaaacaaaagatgttatatagggcaatcggtaagggtatttaattgataaattgtttatttattaatagttttatgttactacttcataaacttctacct  13622100                                                             <---------REM1(1)                                                      <---------HSFB2a(2) ------DOF2                                           --------------->AGL15 =====================================================================MADS_MADS       <----------DOF2 ----------AGL15                                      --------->HSFB2a(2)  ----------->GT1 --------->AGL15                                      <---------------AGL15--------->ALFIN1  -------- --->TOE2(3)                            <---------ANAC46     ----------->GT1 ----------->HVH21  -----   ttactagttttgtttagaagacgtttgcagtagagactagagacttgtaaatgtttctacaagttgtaacttacaaggtgtgacaactctttttttctta  13622200                                                     <---------MYB52(1)        --------->ANAC58                                                    <-------GAMYB  <----------DOF2                                            <-------TEIL          <---------ANAC58    --------->ANAC58                                      <---------MYB52(1)          <---------ANAC58    --------->ANAC58                                     <-----------HVH21     <-------TEIL        --------->ANAC58                                     <-------GAMYB  --------->At5g28300   --------->ARR14(2)    <-----------GT1   --------->TOE2(3) --------->MYB59--------->MYB59    <---------ARR14(2)   <---------YAB1   <-------TEIL     --------->At5g28300  --------->CCA1(2)    --------->ANAC55(2) ->TOE2(3)<---------ATHB12   <-------TEIL  --------->CCA1(2) --------->TOE2(3) --------->ANAC46 ----->DOF2 ---------->DOF2 --------->CCA1(2)       <-----------HVH21   --------->LBD16   aagttattacaaatcaaagtgatacattagatacaacacggttagatacaacacggttagatacattagctttccgaatacacgcgataagcacttctgt  13622300                   --------->AHL20(2)               --------->AHL20(2)               <---------AHL20(2)              <---------AHL20(2)              --------->AHL20(2)        <---------ARR11(3)        --------->AHL20(1)        --------->ARR11(3)        <---------AHL20(1)                                    --------->ICU4       <---------AHL20(2)                          <---------ICU4    <---------AHL20(2)                         --------->AHL20(2)   <---------AHL20(2)   --------->AHL20(2)     <---------AHL20(2)             <-----------RAV1(1)   --------->AHL20(2)<---------ANAC55(2)<-----------GT1 --------->ZAT6       --------->ARR11(3)     -   gcaaattaaatattttttaaattacttaaaatatagtatttttcacaaaataaatatcacactaaatattagagattaatatgttgttttcaaattttca  13622400                                                                                  --------->AHL20(2)                                                                                <---------AHL20(2)                                                                                <---------AHL20(1)                                                                             --------->AHL20(1)                                                                       <---------YAB1  <---------AHL20(2)                                             <---------TOE2(3)      <---------ATHB51 <---------AHL20(2)                                            <-----------GT1         --------->ICU4<---------AHL20(1)                            ----------->GT1<-----------GT1        ------>MYB46(1) --------->AHL20(1)  <----------ID1          ---------->DOF2 <---------AHL20(2)      ------>MYB83  --------->AHL20(1)>>> ------------------------>ANAC81   ----------->GT1            >>>>>>>>>MYB2  <---------AHL20(2)------ --------->DOF2       ----------->GT1   <---------YAB1   --------->ANAC46    --------->AHL20(2)------   aaaaaagacaaaactaaaaacaaatagtaaaagtaaaatgttattttaacattttctaaacgaaaaccaaattatgaaataaaatattttatattgcaag  13622500  Previous    Next  AGI:  At5g35405.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G13261.1); contains InterPro domain Protein of unknown function DUF784, Arabidopsis thaliana (InterPro:IPR008502) Range:  from: 13621392    to: 13621956    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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