Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->MYB52(1)   <---------MYB52(1)  <-------GAMYB                                  ------>MYB46(1) <---------DEAR3(2)                              ------>MYB83 <---------MYB46(3)                            <---------MYB59 ---------DEAR3(1)                         --------->WRKY12 ------->ATERF1(1)                         --------->WRKY45 -----NtERF2                               --------->WRKY38(1) --->NtERF2                               --------->DOF5.7(2) ---------HVH21                          <-------GAMYB ------DEAR3(1)                         <---------ANAC46                                        <---- ------ANAC46                ----------->GT1<---------WRKY18(1)                           <---------ANAC58 ----->DEAR3(1)              --------->At4g35610 --------->MYB52(1)                       <---------ANAC58 ---->RAP2.3(1)        --------->LBD16  <---------DEAR3(1)        <-----------GT1         ----------- --->LBD16         --------->MYB52(1) --------->LBD16          <----------DOF2         --------->GLK1(2) --LBD16------->GAMYB<---------LBD16--------->DEAR3(2)<---------MYB52(1)       --------->MYB52(1)---- >MYB52(1)--------->MYB52(1)--------->GLK1(2)<-----------------AGL1<---------At5g28300<---------GLK1(2)   cgtcggttaaccgaagggacttaaccggagaagctaaaaccggcgttgaccaaactggtatttgacttttaccatcttcaataacagagattccttgagg  13608100                                                                 <---------ARR14(2)      --------->ATHB12                                           --------->ARR14(2)     <-------TEIL                                              --------->LBD16 --ZmHOX2a(1)                    <---------ARR14(2)          <---------LBD16                 -------- ---->AGL15                      --------->GLK1(2)    <---------MYB46(3)              ----------->GT1 ------->GT1              <-----------RAV1(2)       <---------GLK1(2)        ----------->HVH21   <---   agtaagattcattgtaccagagcttgaaacaggggaatctcgatttgatgaccagattgttgaaccggaatcgacatggacgacggagaagtagaaaccg  13608200                  <------NtERF2                 ------>NtERF2                 --------->LBD16               --------->ATERF1(1)               <------NtERF2              --------->ABI4(1)              <---------ATERF1(1)              ------>NtERF2             <---------DEAR3(1)             --------->DEAR3(1)             --------->RAP2.3(2)             --------->ATERF1(2)             <---------ATERF1(2)             --------->RAP2.3(3)            --------->ORA47(2)            --------->ERF1            --------->DEAR4(2)                                                               <-------            --------->ATERF1(1)                                                              <-------            --------->RAP2.3(1)                                              --------->At4g35610          --------->DEAR3(1)                                                 <---------At4g35610       <---------ICU4                                             <---------At4g35610   ------->TEIL       --------->YAB1                                            --------->HSFB2a(1)    --------->ARR14(2)      <---------HSFC1(2)                                       ---------->DOF2          <---------ARR14(2)      <---------HSFB2a(1)                                     <------ZmHOX2a(1)   <---------ETT(2)   <------ZmHOX2a(1)        <-----------GT1        <---------ANAC55(2) --------------------->WRI1 ->MYB52(1)<---------ATERF1(1)                   <-----------GT1 <---------HSFB2a(1)    <-----------ARR10 ------MYB52(1)<---------LBD16     <----------DOF2 --------->ANAC55(2) <----------DOF2  --------->GLK1(2)   gtagaggaatcatcgccgccgggactgaataaaccggctttgaagatggaattacgagacaagaggaaagctcctttggagctatcgacgaatctgaggt  13608300    ----------->GT1  --------->At4g35610  --------->ZAT2                                                                                  --- --------->GLK1(2)                               ---------->DOF2                            ------->GAMYB --TOE1(3)                                <-------MYC3                                   ----------->RAV1(1) --TOE2(3)    <---------TOE2(3)           ------->MYC3 ---------->DOF2                  --------->MYB46(3)   tagaagctgtgaaattagggtaaacaaactctatggaagaagcacatgaaacaaagacaaagagaagattgagactaagtaacaacaacaacaacagaaa  13608400                                                                   --------->ARR14(2)                                        <---------YAB1             --------->GLK1(2)                                      --------->YAB1               <---------ARR14(2)                                      <---------ICU4     --------->At4g35610                                     <---------YAB1      <---------YAB1                                     --------->ICU4    --------->YAB1                        <---------MYB52(1)            <------ZmHOX2a(2)       --------->ARR11(3) <--- ------>TOE2(3) --------->MYB46(3)<---------YAB1  --------->ALFIN1<---------GLK1(2)           <------   cgttgatttcatagagaaaccactctgtttgtttttgttattattacaagaagtggatcatcagagaagaatctgaatgagttcttgtttttttttgtgt  13608500                                      <---------MYB46(3)                                   <---------ANAC46                                  --------->ALFIN1                                  <---------AtMYB61                           <------------CBF                          --------->ATHB12                          --------->ATHB51        <---------ICU4                          -------->ATHB1          --------->YAB1                     --------->ANAC55(2)       --------->YAB1                     <---------ANAC55(2)      --------->ICU4                   --------->ANAC58                     ----------->GT1 <---------AtMYB61        <------------CBF --------->ANAC58            <---------WRKY18(1) <---------ANAC46 <---------YAB1     <---------AHL20(2) *TSS  <---------TOE2(3) <---------YAB1 ----------->HVH21   <---------YAB1  <------ZmHOX2a(1) ------ANAC46     <---------ARR14(2) --------->ALFIN1   --------->TOE2(3) <---------TOE2(3) -----RAV1(1)     --------->ARR14(2) <---------ANAC46   <---------DAG2<---------YAB1           <-----   tgtgttgttaagtttgaccagaaacgtattattggtgtggtggtgaccattatcatcaccttataattgtttattttaggaaggcaacgtttgaatgctt  13608600                                    <---------ANAC46                                  <---------RAP2.3(1)                                 <---------RRTF1(2)                                 <---------RRTF1(3)                                 <---------RAP2.3(2)                                 <---------ANAC46                                 <---------DEAR3(1)                                 <---------RAP2.6(2)                           <---------AHL20(1)                           --------->AHL20(1)                                               <--------                           <---------AHL20(2)                                               <--------                        --------->YAB1     --------->ICU4                                   ---------                     ----------->GT1--------->DEAR3(1)             <---------ANAC58<------MYB83                 --------->ARR11(3)------>NtERF2                   <---------ANAC58<------MYB46(1)         --------->MYB52(1)--------->AHL20(2)                   <----------DOF2   --------->MYB59 <---------ICU4  <---------ARR11(3)<------NtERF2     --------->ANAC58             <---------TOE2(3) - -----DOF2     ----------->ARR10<---------LBD16      --------->ANAC58        <---------YAB1<---------AHL20(2)   tgaaaattacacaagggaagatttagtaataaattgcggcgagcatttatgaagtaggccagttttctttcttacgatgactattaggttttatttattg  13608700                                      --------->AHL20(2)                                     <---------AHL20(1)                                     <---------AHL20(2)                                     --------->AHL20(2)                                     --------->AHL20(1)                                  --------->AHL20(2)                                  --------->ATHB51                                  <--------ATHB1                                  <---------ICU4                                  <---------AHL20(2)     <---------ARR14(2)          --------->ICU4                          ----------->GT1     --------->ARR14(2)          <---------ATHB51                       --------->ANAC58   --------->LBD16               <---------ATHB12                       --------->ANAC58  --------->ANAC46             --------->YAB1                         <---------AtLEC2 <---------LBD16          <---------ZAT18                      <---------AHL20(2) -ICU4                    --------->ZAT18                     <---------AHL20(1) -AHL20(2)            <---------REM1(1)   --------->AHL20(2)  --------->AHL20(2)               <----- >ATHB12              <-----------RAV1(1) <---------AHL20(2)  <---------AHL20(2)    <---------ATHB51 -------->MYB52(1)   <---------TOE2(3)<---------AHL20(2)  <---------AHL20(2)        --------->AHL20(2)   ctcaccggaacttatacgagtttgatgttgcactaataatttatttttttagtttcttagttaattttttttgcaaggaaaaacaaattattcatttttt  13608800                                          --------->ATHB12                                          --------->ATHB51                                          -------->HAHB4                                          <--------ATHB1                                          <---------ICU4                                         <---------YAB1                 <---------HSFB2a(2)     --------->ICU4                 --------->HSFB2a(2)     <---------ATHB51                                          <-            <---------ANAC58           --------->YAB1                                             <--      <---------AHL20(1)            --------->ANAC55(2)                                         <----      --------->AHL20(2)            <---------ANAC55(2)  --------->AHL20(2)                     <----      <---------AHL20(2)       ----------->GT1           <---------AHL20(2)                   <------     --------->AHL20(2)        <------MYB46(1)          <---------AHL20(2)                   --------   --------->TOE2(3)           <------MYB83 <---------WOX13(1)                             --------->YAB1 ------GT1  <---------ANAC58  --------->MYB59 ----------->GT1                             --------->AHL20(2)   cttcacattaaatttcgtttcagaacttaaatttggttacataataattggtttatattttaaatgtagatttcaactctgttcgattcacaataaatat  13608900                                                                      --------->ICU4                                                                      <---------YAB1    <---------TOE2(3)                                        ------>ZmHOX2a(1)    <---------TOE1(3)                                       --------->TOE2(3)   <-----------GT1                                          --------->TOE1(3)  <-----------GT1                                     <---------AHL20(2) <---------AHL20(2)                                   <---------AHL20(1) --------YAB1               --------->AHL20(2)        --------->AHL20(1)     <----------DOF2 -------AHL20(2)          --------->YAB1             --------->AHL20(2)--------->YAB1 -----YAB1            <---------AHL20(2)             <---------AHL20(2)<---------ICU4 -----AHL20(2)        --------->AHL20(2)             --------->YAB1 --------->YAB1 ---ICU4             --------->AHL20(2)         --------->AHL20(2)  <---------ICU4               ---- ->ICU4            ------->TEIL                 <---------AHL20(2)--------->ARR11(3)      <---------YAB1   tattttaacgtttttcacatgaatttaaaaataaaaacacaaattcaaatttaaattatattccttaaaatcatgatgacttttagtttttttttataga  13609000  Previous    Next  AGI:  At5g35370.1    Description:  carbohydrate binding / kinase. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G32300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61828.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72729.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contains Int Range:  from: 13605663    to: 13608501    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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