Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->At4g35610                                                                      --------->YAB1                                                                     <---------YAB1                                                                    <---------ARR11(3)             xx                                                                   --------->YAB1               xxxxx                                                                  <---------YAB1      --------->AHL20(1)                                                  --------->AHL20(2)--------->ARR11(3)--------->AHL20(2)                                             --------->AHL20(1) --------->CCA1(2)     <---------AHL20(2) --->DAG2                                    --------->AHL20(2)--------->ARR11(3)     <---------AHL20(1) --->DOF2           <---------TOE1(3)        <---------AHL20(2)<---------ARR11(3)    <---------AHL20(2) >ARR11(3)          <---------TOE2(3)  --------->LBD16         --------->ARR11(1)    --------->AHL20(2)   gttgcaaaaatggtcgaatttgaaggttttttgcacaaacccagaaataaaataaaacaatataagatatgatcatagcctctgaaaataaatttagaac  13601000                                                                                       <---------YAB1                                            --------->ANAC58                          <---------ARR14(2)                                          ---------->DOF2                             <---------ARR11(3)                                       --------->ANAC58                   --------->AHL20(2)                                       --------->ANAC58                   <---------AHL20(2)                                  --------->TOE2(3)                 --------->YAB1    --------->ARR11(3)            <---------TOE2(3)  ----------->RAV1(1)              <---------YAB1        --------->ARR14(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  ---------->DOF2          --------->YAB1          --------->GLK1(2) xxxxxxxxxxx>smallRNA(i)    <-----------GT1 --------->ANAC58 <---------YAB1           <-----------ARR10   tagactcttccattgatgtttcaacccatataacaacataaaagcaaagcaataagttgaaagatgataatcaaaattaaaaaatgagtatctttgcaac  13601100                     --------->AHL20(1)                     --------->AHL20(2)                    --------->AHL20(2)                                                            <--                    <---------AHL20(2)          <---------ZAT14                                <xxxxx                --------->AHL20(2)   <---------AHL20(2)                                       <------                <---------YAB1 <---------ANAC55(2)                 <----------DOF2            <------             ------->TEIL ----------->GT1  <---------ANAC55(1)     <---------DAG2   --------->TOE2(3)     <---------ANAC58<---------AHL20(1)    <---------ANAC46     --------->ARR11(3)  --------->TOE1(3)     <---------ANAC58<---------AHL20(2)  <---------AHL20(2)     <---------ARR11(3) --------->At4g35610 <<<<<<<<<MYB2  <---------AHL20(2) --------->ANAC55(2) --------->PCF2              <---------At4g35610   ttggttttcttgatgtatataattaaatttgttacatatgtaattaagtgtaaactggacccataagacctttttcatccttgtaagcttaatgggcttt  13601200               ----------->RAV1(1)               ------>NtERF2               <---------RAP2.6(3)       <-----------RAV1(1)      <---------TOE2(3)    <---------AHL20(2)   <---------AHL20(1)   --------->AHL20(2)                                                                      ----------   --------->AHL20(1)                                                                  <----------DOF2   <---------AHL20(2)                                                             <---------AHL20(2) -------YAB1  --------->RAP2.6(2)                                             --------->AHL20(2) xxxxxxxxxxxxxxxxxxsmallRNA(fl3)           --------->ANAC58                   <---------AHL20(2) ----DOF2     <---------ETT(1)  ---------->DOF2       <-----------GT1        --------->AHL20(2) ---DAG2     <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->ANAC58          ----------->HVH21 --------->TOE2(3)   atcaatataatgttggccgacaaaaaaaaaaaaaaaaagacccataagaaacattgaaaccagtctggcccatgacccatataatttatctttaaaagag  13601300                                 --------->LBD16                                <---------ANAC58                                <---------ANAC46                                <---------ANAC55(2)                  <---------ATHB12                    --------->LBD16                                ------>MYB46(1)                   <---------ANAC46     <---------ANAC58           ------>MYB83          --------->ARR14(2)              <---------ANAC58  --------->ANAC55(2)              --------->AtMYB61       <---------ARR14(2)              <---------ANAC58  <---------ANAC55(1)    --------->ANAC58                 <------ZmHOX2a(1)         ------->MYC3           <---------ANAC58       --------->ANAC58                 *TSS    <----         <-------MYC3      <---------ANAC58    <---------ZAT6    <---------MYB111(1) <------NtERF2 <---------ANAC58  <---------ANAC58     <---------ANAC58   --------->ARR14(2)      --------->ALFIN1 <---------ANAC58  <---------ANAC58     <---------ANAC46   <---------ARR14(2)<-----------HVH21  ----- >DOF2<---------ALFIN1     <---------ANAC58--------->REM1(2)    --------->ANAC46   <---------DEAR3(1)   tctgcgttccacgtttgcgttccgagtttgcgttccgtgtttgcgtttagagttggcacaaaatccaccaaatcaaaccagtcgggcggaggattcaata  13601400                                                              --------->YAB1                                                              <---------ICU4                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  --------->AGP1                                                  <---------ARR11(3)                                                  <---------AGP1                                                  --------->ARR11(3)                                                  --------->ARR14(2) -----ARR11(3)                                    <---------ARR14(2)                  <----------DOF2 ---->ARR11(3)   <---------ICU4                 ----------->ARR10--------->YAB1<---------ALFIN1   tctcagagtttcactctcaacatttcattctctctctctctctcaacaattagatctgtttcgataatcacgaggtttccctcacttcctttccattgct  13601500               ------>ZmHOX2a(1)               --------------->AGL15                                                   --------->ANAC58               <---------------AGL15                                                   --------->ANAC46              <-----------------AGL1                                              --------->AtMYB61              <-----------------AGL2                                         --------->ANAC58              <-----------------AGL3                                         --------->ANAC58              <-----------------AG      --------->YAB1                      --------->SPL7             ----------->RAV1(2)        --------->ATHB12                  --------->LBD16            ------>NtERF2               <---------ICU4                   --------->ANAC55(1)      <---------GLK1(1)                <---------YAB1                    --------->ANAC58     <------      --------->GLK1(1)         --------->HSFC1(2)                   <---------ALFIN1  --------->ANAC58     <---------ARR14(2)         <---------HSFC1(2)          <---------MYB52(1)  ----------->RAV1(1)     --------->ARR14(2)         <---------HSFB2a(1)    <---------ARR14(2)--------->ANAC58    --------    <------ZmHOX2a(1)           --------->HSFB2a(1)    --------->ARR14(2)--------->ANAC46    <-------   aaaccaggatttgcctcctgcatttggaaatggacgcttctatgattaccaattccaaatccattacttctccacccgtaagcaccaaaacgctattaat  13601600                                                                                                   <-                                                                                                 ----                                                                                                <----         --------->WOX13(1)                       ----------->GT1                             -------      --------->TOE2(3)                        --------->ARR14(2)                            <------ZmHOX2a(1)    <-------TEIL                               ------->TEIL  <---------MYB52(1)             <XXXXXXXX ---AHL20(2)                                   --------->GLK1(2)                   --------->HSFB2a(2) ->AHL20(2)              ----------------------->TaNAC69(2)----------->GT1         <---------HSFB2a(2) --AHL20(2)     <------------------------ANAC81<---------ARR14(2)        <----------DOF2  <----------   ttgaaattcgtcaatctctgtttctctgtttctctgtttcatgtctctgaatctgttaaatctgttatatgaagtctttagccttagggaagtcaggagg  13601700                                           ---------->DOF2        <---------YAB1                  --------->ANAC58  <------ZmHOX2a(1)                     --------->ANAC58 -----ZmHOX2a(1)<---------ZAT18  <---------ICU4 ----->ALFIN1   <---------ZAT14  --------->YAB1 --ZmHOX2a(1)   --------->ZAT18  -------->HAHB4                                 <---------TOE2(3) -->ALFIN1      --------->ZAT14 <---------ATHB12                  --------->ARR11(3) XXXXXXXXXXXXMIR847             --------->ICU4                    <---------ARR11(3) -RAV1(2)--------->YAB1  ------->TEIL   --------->AtLEC2      ---------->DOF2 ---------->DOF2   aggaggagttatcagaagttcactatgtaacttaatgatgccaagcaaagttaacttccctagacaaagaactcaaactctaaaggttagccagaagaaa  13601800                                                    --------->GLK1(2)                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                   <---------GLK1(2)                                                   --------->ARR11(3)                                          <---------MYB46(3)                                   <-----                                          ----------->GT1                                      ------                                         --------->ALFIN1                                   ---------                 <---------AtMYB61       <---------ANAC46                                  <---------YAB1               <---------MYB46(3)      <---------MYB46(3)       --------->GLK1(2)     <---------ZAT6              --------->ALFIN1        --------->ALFIN1          <---------ARR14(2)  <---------ANAC46              <---------ZAT6          <---------AtMYB61<---------HSFB2a(2)          <---------ANAC58              <---------AtMYB61  --------->AtLEC2----------->ARR10   ----------->GT1<---------ANAC58      <---------At4g35610 <---------ZAT6 <---------AtMYB61      --------->ARR14(2)<---------ARR14(2)   ctcaagagagctactagtggtggtcttggtgttacatgcagtggtggtgataagattctcgtagcgaatcgaggtgaaattgcagttcgtgttatcagaa  13601900  Previous    Next  AGI:  At5g35360.1    Description:  CAC2 (acetyl co-enzyme A carboxylase biotin carboxylase subunit). similar to MCCA (3-methylcrotonyl-CoA carboxylase 1) [Arabidopsis thaliana] (TAIR:AT1G03090.2); similar to biotin carboxylase precursor [Glycine max] (GB:AAC23573.1); similar to chloroplast biotin carboxylase [Gossypium hirsutum] (GB:ABP98813.1); similar to biotin carboxylase [Brassica napus] (GB:AAK60339.1); contains InterPro domain ATP-grasp fold; (InterPro:IPR011761); contains InterPro domain Rudiment single hybrid motif (InterPro:IPR011054); contains InterPro domain Pre-ATP-grasp fold; (InterPro:IPR013817); contains InterPro domain Acetyl-CoA carboxylase, biotin carboxylase Range:  from: 13601388    to: 13605726    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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