Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->At4g35610                                                                              <---------At4g35610                                                                              --------->At4g35610             <---------ANAC46                               <---------ETT(2)  <---------ZAT2   --------->HSFB2a(2)                              ---------->DOF2         <--------P   <---------HSFB2a(2)                           --------->ANAC46         <---------MYB46(3)   --------->LBD16                               --------->ANAC58        <---------ZAT6     -------->P  <---------LBD16                                --------->AtLEC2    --------->ARR11(3) --------->ZAT6 <---------LBD16            <----------DOF2      --------->ANAC58---------->DOF2   <---------At4g35610   ttctccgggaatgaggcttatacatttgaactttggagcaaaaatgtctccaagcaaagcagtctacaaaagatagtggtagctcagctaaaactaccat  13592900                                                              --------->AtMYB61                                                             --------->MYB46(3)                                                           <------ZmHOX2a(1)                                                      ------>MYB83                                                      ------>MYB46(1)            <----------DOF2                         --------->MYB46(3)        <---------ANAC46                            <---------MYB55(2)                          -----        <---------ANAC58         <---------MYB59   --------->ANAC46                    --------->ARR14(2)        <---------ANAC58  <-----------GT1          --------->ANAC58                    <---------ARR14(2)   --------->MYB52(2)  --------->ARR14(2)          --------->ANAC58  ----------->GT1   <---------ZAT14   ctcattagttgcttctttccaaacagatttactgaccttacttatagtcatacacccactaggaccaccatgagttaaaacggtttgagtattctgaaca  13593000                                                                 --------->LBD16                                                                --------->HSFB2a(2)                                                                <---------HSFB2a(2) ------>NtERF2                                                             --------->ARR14(2)    --------->DEAR3(1)                                                           <---------MYB46(3)   --------->ANAC46     <----------DOF2                                   --------->ALFIN1 <-------GAMYB    <----------DOF2   --------->At4g35610                          <----------DOF2<---------LBD16  --------->ANAC58   --------->ZAT2                          <---------HSFC1(2)--------->GLK1(2)  --------->ANAC55(1) <   <---------At4g35610         --------->AHL20(2)  ---------->DOF2<xxxxxxxxxxxxxxxxsmallRNA(s)------- ---->TOE2(3)    --------->ARR14(2)        --------->HSFC1(2)<---------ARR14(2) --------->ANAC58  ---   ttagcagctttccatacctgatatgccttacaaatatttagaagatgcttctttaaagtggaggttccggacttggttgaacacgccaactctttcccac  13593100                                                                           <---------WOX13(1)                                                                          <---------ANAC58                                                                ------>MYB46(1)                                                                --------->MYB52(1)                                     <---------ANAC46           ------>MYB83                                     <------MYB46(1)          <---------MYB46(2)                                     <------MYB83             <---------MYB59<---------WRKY18(1)  ---                                     ----------->GT1          --------->AtMYB61        <---------ALFIN1 ---------ICU4                      --------->MYB46(2)      <---------ARR11(3)        --------->MYB46(3) ---->RAV1(1) <---------ATHB12      --------->MYB111(2)--------->TOE1(2)  <---------ANAC58       <--- ------>At5g28300       --------->ATHB12        ------>ZmHOX2a(2)         <---------AtLEC2     ------   agtaattgcaattgcaatggtttacatcatttgaaagtttggtgaaatgatcccaaacccaagacctaaccttcttgcttgacttagaaccacttccccc  13593200                                --------------->AGL15                                <---------------AGL15                       <---------WOX13(1)          <---------YAB1       ----------------->AGL2                                              --         <---------ARR11(3)    <-----------------AGL3                                              --         --------->ARR11(3)    ----------------->AGL3                  <---------ICU4              --       <---------MYB52(1)      ----------------->AG                   <---------YAB1               -- --->NtERF2            <--------P                           ----------->HVH21                   ----- ------ATERF1(1)      <-------GAMYB                       --------->At4g35610            --------->YAB1 ----->RAV1(2)       <---------MYB46(3)                   <---------At4g35610           <-------TEIL-   tgcccctccattatctttcttcttggttgattttccaaaaatagatgtttcaatctcttcttctgacatttcatcattctcatgaattgattcatcacaa  13593300         ----------->RAV1(1)        *TSS    <---------At4g35610    --------->At4g35610    =================RAV                <---------AHL20(2)    ----------->RAV1(2)            <---------AHL20(2) ------->ANAC58            ------->GAMYB--------->AHL20(2) ------->ANAC58            ----------->RAV1(1)     <---------ICU4                     --------->ZAT6 ------->ANAC46            --------->AtMYB61    --------->YAB1                  <------------CBF ------->RAP2.6(2)        --------->MYB46(3)--------->ZAT6                    --------->AHL20(2) ---->ANAC46     ------------>CBF  --------->AHL20(2)                   ----------->GT1        ------ ----->NtERF2    <-------TEIL     --------->AHL20(2)        --------->YAB1    <---------AHL20(2)   --   gacgccatctgcaacaagattcaattcaaccacagattaaatttaaacactaataagttcaaacataaacgaatgagtaaaaaattgatcactagtcata  13593400                                                   --------->TOE2(3)                                      --------->ANAC58              <---------KAN4(2)       --------->ANAC58                                            --- --->AtLEC2  --------->YAB1       ----------->GT1  --------->YAB1                                 <-- ------->MYB52(1)         --------->ZAT6           --------->TOE1(3)                      <---------ETT(2)   caaacgaatgcataagaataaacttcaaacactaagaagtaagaaactaagaaccataaacgaatgcataagtttgaacttgactaactccatcgacatt  13593500                           --------->ANAC58                           --------->ANAC58                           --------->ANAC55(1)                           --------->ANAC46                 <---------TGA1a                 ========================MYC_MYB                 <---------O2                                                                      --             --------->ANAC46 ----------->RAV1(1)                                                 <-- <---------ARR14(2)        <---------ANAC55(2)                                                    <<< --------->ARR14(2)----------->HVH21      --------->ATHB12                                        <<< ------>ANAC55(2)--------->O2 --------->MYB52(1)                                                ----- -------ANAC55(2)--------->TGA1a ------->GAMYB                ---------->DOF2             --------->LBD16   acatatccaaactagacacaagtgacaagacgcaacagaaaaattgatttctatctaaacatgtaaaagaaaaatgggtttctagctaaacccagaaaca  13593600                                                                                           --------->LBD16                                                                                          --------->HSFC1(1)                                                                                          --------->HSFB2a(2)                                                                                  <---------WOX13(1)                                                                                --------->ATHB12                                                                      <---------------AtSPL3                                                    <---------ANAC55(2)        <---------YAB1       -                                                    --------->ANAC55(2)   ------->TEIL    <---------HSFB2a(2) ------->YAB1                                --------->TOE2(3)        --------->DAG2      <---------HSFC1(1) -------ATHB12                               --------->YAB1          ================================ <<<<<<ARR2                                  --------->TOE1(3)       ---------->DOF2     <---------LBD16 <<<<<<ARR1                                 <<<<<<<<<ARR1         <---------AHL20(2)<------MYB83    - ---->WOX13(1)             <-----------TGA1 <<<<<<<<<ARR2         --------->AHL20(2)<------MYB46(1) -   atcatattctaaattctaaacatctatttcgtcatacacgattacaatcttaacatgtaatcgaaaaattaaaaagtacctctgattggtttctggaaaa  13593700                                                                                                   --                                                                                                   <-            <---------DEAR3(1)         <---------HSFB2a(2)            --------->YAB1               --   <---------ANAC46                    --------->HSFB2a(2)          <---------WOX13(1)            ---   <---------TGA1a                     <---------LBD16            --------->ATHB12               ----   <---------O2                    <---------GLK1(1)             --------->ICU4                  <---   --------->TGA1a            --------->STY1(1)                <---------ICU4                   <---- --------->MYB52(1)    <---------At4g35610  <---------WOX13(1) --------->YAB1                   ----- ------>NtERF2 --------->ALFIN1 <---------TOE2(3)             --------->ICU4  ---------->DOF2   ----- ---------->TGA1       --------->GLK1(1)--------->LBD16  --------->YAB1    <---------TOE2(3)    <---- ============bZIP_DOF  --------->At4g35610<------ZmHOX2a(1) <---------ICU4--------->DAG2        <---- -------->WRKY12  --------->ETT(2) --------->GLK1(1)    <---------ATHB12 ---------->DOF2        ----- ---------->HVH21<------NtERF2<---------STY1(1)   <-----------GT1<---------YAB1             ---------   cgctgacgggagagacggtgtcgagagctccactagggtttccaggattgattcacaaatcaaaattatgattgataaaggaaagagtagagaataaaga  13593800  Previous    Next  AGI:  At5g35354.1    Description:  transposable element gene. hAT-like transposase family (hobo/Ac/Tam3), has a 2.6e-18 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana) Range:  from: 13591198    to: 13593308    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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