Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ANAC58                                                  --------->ANAC58                                                  --------->ANAC46                                                <---------ALFIN1                                               <---------ZAT14                                               <---------ZAT18                                               --------->ZAT14         --------->At4g35610                                               --------->ZAT18         <---------At4g35610                                            <---------ANAC58  --------->ATHB12                                         ------->MYC3       --------------->AGL15                                         <-------MYC2      <-----------------AGL3                                         <-------MYC3      <---------ANAC58                                         ------->PIF5      <-----------------AGL1                   <                                         ------->MYC2      <-----------------AG            --------->LBD16                                   <------------AtMYB77    <-----------------AGL2          ------>NtERF2                      <---------LBD16    <-------PIF5      <---------ANAC58               <---------DEAR3(1)              --------->YAB1     --------->ARR14(2)        --------->ANAC55(2)           <---------LBD16              <-----------GT1    <---------ARR14(2)      <---------AHL20(2) <---------At4g35610     <            ------->TEIL   --------->GLK1(1)<---------ANAC58<---------------AGL15<----------DOF2<----   tgagtcactatatgaatcaccatcttcggagttcgtaactgctcgtgcctgcactccatttacttgatttggcaactcaactgctttgttctccggcgaa  13499100                                                                                            ---------                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                        <---------ATHB51                                                         <---------ANAC55(2)            --------->ICU4           <-----------GT1                               --------->bZIP60(2)        --------->LBD16      <----------DOF2                                    --------->ANAC58          --------->ANAC46  <---------MYB52(1)                                     --------->ANAC55(2)    --------->MYB52(1) ---------ANAC58                                         --------->ANAC46     <---------MYB52(2)<---- ---------ANAC58  ------>ZmHOX2a(1)                      --------->ANAC58--------->ANAC46<---------ICU4 -----ARR14(2) ------>ZmHOX2a(1)                         --------->ANAC55(1)<-----------GT1 <--------   tttcgtttctttttctcctccttcttcagtataagtttatctaatttcttccttctaacacgtaactcatcgtctaagtaactatccgaaataattaaac  13499200         <---------ALFIN1             ------>ZmHOX2a(1)     =========================HOX2a_HOX2a     <------ZmHOX2a(2)             ------>MYB46(1)                           --------->ARR11(3)    --------->ARR11(3)             ------>MYB83                              <---------ARR11(3)    <---------ARR11(3)        --------->YAB1  <-----------GT1         --------->ANAC46 >AHL20(2)                   --------->MYB46(3)                   --------->YAB1 ------ID1             ------>ZmHOX2a(1) <---------CCA1(2)       <---------YAB1     --------->LBD16 -AHL20(2)         --------->ARR14(2)--------->TOE2(3)  <-----------GT1      <-----------ARR10   gacgaagatcaccactctccaattcctcacaatcaccatcctcatatatcactctatataacccagtatcataagacactatcttccctagaaaaacttc  13499300                                         --------->RAP2.6(3)                                        --------->MYB52(1)                                       <---------GLK1(1)                                       --------->GLK1(1)                <---------ANAC58                                      <---------ARR11(3)                <---------ANAC58                                  ---------->DOF2                 <---------ARR14(2)                               --------->ANAC58                --------->HSFB2a(2)                               --------->ANAC58                <---------HSFB2a(2)                             ------->GAMYB                  --------->AtMYB61                 <---------At4g35610  --------->ARR11(3)    ------->GAMYB<----------DOF2         --------->GLK1(2)------->GAMYB--------->CCA1(2)   --------->MYB46(3)         <---------ARR11(3)--------->ANAC58              <---------ALFIN1<---------DAG2         --------->ARR11(3)--------->ANAC58      --------->ZAT14  --------->ARR14(2)     --------->YAB1      --------->MYB46(3)      <---------ZAT14--------->LBD16       <---------MYB46(3)   attgtcatcaaaatctttcagcatataacaaccaagtaaagatatcggcactgcaggctcaacctccagaacttgctttttccctcgattgttcaatttt  13499400                        <---------ARR14(2)           --------->TOE1(3)                        --------->ARR14(2)           --------->TOE1(2)                     <---------bZIP60(2)            --------->HSFC1(2)                     <---------ANAC58               <---------HSFC1(2)                     <---------TGA1a                --------->HSFB2a(1)                     <---------ANAC58               <---------HSFB2a(1)                     <---------O2                <------ZmHOX2a(1)         ------>ZmHOX2a(1)  ------>ZmHOX2a(1) --------->HSFB2a(2)    --------->YAB1  <---------TOE2(3)         <---------HSFB2a(2)             <---------LBD16   <---------YAB1 ----------->TGA1      <---------STY1(1)                  <----------DOF2 --------->YAB1   ----------->HVH21     --------->STY1(1)        --------->YAB1   cgattatcatcctctaatctctgacgtttcctcggtcttcccctaggtctaggaaccttcgcttccatcaaaacaacctttgggggaatttcatactcta  13499500                 <---------At4g35610                 --------->At4g35610          <----------DOF2                             <---------YAB1                              ---      --------->RVE1(1)                            <---------ARR11(3)                          <-----     <---------ARR11(3)                            --------->ARR11(3)                  <-------TEIL     --------->ARR11(3)                           <---------GLK1(2)          --------->ANAC58  ------     --------->GLK1(2)                         --------->YAB1                --------->ANAC58 <------    <---------GLK1(2)                      <-------TEIL <------------CBF   ---------->DOF2-----------   tggccaaaatctctttgggagcagtaagtttctccactacctagattcatcaaaatctcattgtttcatcgaaacccataagccctagattcatcaataa  13499600                                            <------ZmHOX2a(2)                                           <---------ARR14(2)                                           <---------AGP1                                           --------->AGP1                                           --------->ARR11(3)                                           <---------ARR11(3)                       <---------ANAC46    ----------->GT1                        --------->ARR14(2)                       <---------ANAC58   ----------->GT1                        <---------GLK1(1)                   <---------TOE2(3)  --------->DAG2                     --------->ARR14(2)               --------->ANAC55(2) ------>YAB1                         --------->GLK1(2)                <---------ANAC55(2) ----ICU4                            <---------ARR14(2)               ----------->RAV1(2) --->YAB1                       ------->GAMYB------>ZmHOX2a(2)        --------->At4g35610 ---ATHB12                  --------->MYB46(3)                        <---------At4g35610         --- ->CBF       ------------>CBF----------->RAV1(1) ---------->DOF2    <-----------GT1 <---------ANAC58   tcaaaaggtttaaaacccaattcacatggaacaacagcgaatcgagatctgtaaaggagaagacttaaaatcacctgatcaaggtttcttgaagagaaga  13499700                                                 <------------CBF                                         --------->ARR14(2)                   <----------ID1        <---------ARR14(2)                                   <------ZmHOX2a(1)          <------ZmHOX2a(1)             <------ZmHOX2a(1)  <------ZmHOX2a(1)            >>>>>>>>>TBF1       <---------LBD16             <---------MYB52(2)    --------->ANAC58            >>>>>>>>>TBF1 -------->GT1 ---------->DOF2   --------->MYB46(3)       --------->ANAC58         >>>>>>>>>TBF1   agggaaaactcaggaagaaagaagacaaaattcaacaacgaaggatttgggaattggacaaggacataagagagagaagacgaagaagaagaagaaggag  13499800                                      <---------ARR14(2)                             --------->ALFIN1                           --------->ALFIN1                           <-----------RAV1(1)                         --------->At4g35610                         ----------->RAV1(2)                         <---------ZAT2                                     <---------DAG2                   <---------ANAC58 <---------MYB46(3)                     <-----------------AGL2         <----------DOF2 --------->ZAT2                      <----------DOF2<----------DOF2<---------ANAC58        --------->TOE2(3)<---------At4g35610          <---------DAG2    <---------ZAT18    <---------ANAC58      ---------->ID1 --------->ALFIN1 --------->ARR14(2) ---------->ID1<---------ANAC58    <---------ANAC46  <---------DAG2   <---------ANAC58<---------AtMYB61  <----------DOF2  <---------ANAC58    <---------  <----------DOF2  <---------ANAC46--------->ALFIN1  <---------GLK1(2) <---------ANAC46    ----------   agtgctttttcctttaagcctgcgtgcagctgtggctgtggttcttctccctacagcttttccctttaagcctgcgtgctttttctggtcttggcctgtt  13499900                                                                                   <----------DOF2                                   <---------ANAC58                          <---------ANAC46                                   <---------ANAC58                      <---------ANAC58                                  <-------MYC3             --------->TOE2(3) <---------ANAC58  <---------ANAC46       <-------GAMYB   <---------RAP2.6(3)             <---------ANAC58           < --------AGL1    <---------AHL20(2)--------->ALFIN1        --------->TOE1(3) <---------ANAC58<------- ------->AGL1   <---------AHL20(2)------->MYC3       <-----------RAV1(1) --------->ATERF1(1)<--------   tgggccttgtacttgttttttattttcagttggacatgtgtgccttcatggcagtatgttgccttaaacgcttgggcctgcgtgtctttttgggcctttg  13500000  Previous    Next  AGI:  At5g35210.1    Description:  peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT5G22760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16702.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain DDT (InterPro:IPR004022); contains InterPro domain Peptidase M50; (InterPro:IPR008915); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 13491426    to: 13499468    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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