Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <-----------GT1 -----MYB46(1)                                                          --------->YAB1 -----MYB83                                                        <---------MYB52(1) ---ICU4                               --------->WOX13(1)         <-------GAMYB -->ATHB51                           <---------ATHB12             --------->At5g28300 -->AHL20(2)             <---------------AGL15                   ----------->GT1 ---AHL20(2)             ============================================================================ -->ATHB12               --------------->AGL15               <---------ARR14(2) --YAB1   <---------ARR11(3)        <---------RAP2.6(3)      --------->ARR14(2) ->ICU4   --------->GLK1(2)  <---------ICU4               --------->AHL20(2)          ----------->RAV1(1)   ttggtttttcaaaatctaaaaactattccaaaaattgcagtcattcaaggccttatccaaaaatatacggttaattttaactaaactccaacaaaatttg  13436000                                                                 --------->At4g35610             --------------->AGL15                ------------>AtMYB77             <----------DOF2                     <---------MYB52(1)----------->HVH21             <---------------AGL15           <---------At5g28300 <---------At4g35610     <---------ANAC58            <-----------------AGL3          --------->MYB52(1)  --------->MYB52(1)       <---------ANAC46            =========================================================================================       --------->TOE2(3)             ----------->GT1      <---------ANAC58    <---------AHL20(2)-----       <---------MYB59               --------->YAB1       <---------ANAC58 ----------->GT1      -----       --------->TOE1(3) <---------MYB59    <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ----- ============================MADS_MADS      ------------>MYB.PH3(1)------->GAMYB         <---------ANAC58   aatttcatacctaaactttatttagtatctaattcgatatcgtaattaaccgttacagttgcgaatcaactgacatatgtttaatagtatggcttaaaac  13436100                      <---------TOE2(3)                      <---------TOE1(3)                     --------->MYB52(1)          <---------------AGL15                                                ----------->GT1          --------------->AGL15                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <---------ANAC46                                                  <---------DOF5.7(2)         <---------ANAC58                                              <---------ANAC55(2)         <---------ANAC58                                              <---------ANAC58    <-----------RAV1(1)                                                <---------ANAC46 =========================MADS_MADS  <---------HSFB2a(2)               <---------ANAC58 ---->ANAC58         <---------DOF5.7(2)                         <---------AHL20(1) ---->ANAC58       --------->DOF5.7(2)      --------->GLK1(2)    --------->AHL20(1) ---->ANAC46     <---------TOE2(3)   --------->HSFB2a(2)         <---------ARR11(3)        <---------ANAC46   gacatcgtgttgcttgtttaagttaacgtttgaatttttctacaaaaatcgggtctcgacaaatcgatatatttcgtaaacgagtgaaacgttgtgggtt  13436200   ------>ZmHOX2a(2)  --------->CCA1(2)  --------->ARR14(1)  <------ZmHOX2a(2) --------->AGP1                        <----------DOF2                    --------->YAB1 <---------ARR11(3)         --------->TOE2(3)                             --------->AHL20(2) --------->ARR11(3)         <----------DOF2                            --------->YAB1              -- --------->ARR14(2)         --------->TOE1(3)                       --------->YAB1                 -- <---------ARR14(2)<--------ATHB1   ----------->GT1             ------->TEIL                    -----   taagatccgatttttgcagaataattcaaactttaaaacggttttttggccaaaacaaaaaatatgaaactaataataaaaaatgaaatctagcctctag  13436300                                                                <---------AHL20(2)                                           --------->ANAC58     --------->AHL20(2)                                           --------->ANAC58--------->ARR14(2)                                           <----------ID1  <---------ARR14(2)                                          --------->SPL7   <---------ARR11(3)        <-------TEIL                  <---------------AtSPL3<---------RVE1(1)                   *TSS ------->RAP2.6(2)           --------->MYB52(1)         <---------ANAC46                   <---------AHL20(2) --------->RAV1(1)   <----------DOF2  <---------------AtSPL8<---------CCA1(1)           <----------DOF2 ---->ANAC46       <xxxxxxxxxxxxxxxsmallRNA(le3)    <------------CBF        ---------->DOF2--------->AHL20(2)   gccacaaatatacatttgtccatcttttgcataatggataagagtacgacaaaacattgtggatatttattttctcccaaaagcattcttcttttaattt  13436400                                --------->AHL20(2)                          --------->ANAC58                                <---------AHL20(2)                          --------->ANAC58                           <---------MYB52(1)                             --------->TOE1(2)                          <---------RAP2.6(3)                            ------>ZmHOX2a(2)                          <-------GAMYB                                  ============================                     <---------RAP2.6(2)                                 ================HOX2a_HOX2a                  <-----------RAV1(1)                    <-----------RAV1(1)--------->ANAC46                  <---------AtMYB61            ---------->DOF2      <---------WOX13(1)              <                <-----------RAV1(1)         <---------HSFB2a(2)   --------->ATHB12             <-----     <---------AHL20(2)  <---------MYB46(3) --------->HSFB2a(2)  --------->ICU4       ---------->DOF2    --------->AHL20(2) <------NtERF2       --------->ZAT14    <---------AtLEC2    <------ZmHOX2a(1) <   agtccattttatagttttttgtggtggccgttatttaaaatccagtccagaaagaaacaatgttgcattgattgatccaaggaaggagcaaagtagagga  13436500          <---------CCA1(2)          <------NtERF2                                                            <---------DAG2        <---------ANAC58                                                      --------------------->WRI1        <---------ANAC46                                                  --------->bZIP60(2)        <---------ANAC58    <---------At4g35610                      --------->ARR14(2) =HOX2a_HOX2a               --------->At4g35610                      <---------ARR14(2)        <----- -----------GT1         <---------ARR14(2)                          <---------CCA1(2)         ------- -ZmHOX2a(1)  <----------DOF2    <---------CCA1(2)     <---------At4g35610--------->ANAC46  <-------- <<<<<<<<<<<<<<<<LFY    --------->ARR14(2)       <<<<<<<<<TBF1  ------>ZmHOX2a(1)  <----------DOF2   tttaacaatggcgtctctttctctcagttctgctcatttctcttcaacttcttcttcatctcgctcctctatatccacttcatcgctttctccgtcgtca  13436600                                        <---------At4g35610                                     <---------At5g28300                                     <---------DOF5.7(2)<---------CCA1(2)                                   ----------->HVH21   ------>NtERF2                                   <---------MYB52(1) --------->RAP2.3(3)                                   --------->DOF5.7(2)--------->DEAR3(1)                                  <-----------HVH21  --------->ORA47(2)                                  <-------GAMYB      <------NtERF2                                --------->RAP2.3(1)  --------->ATERF1(1)                                <------NtERF2        --------->RAP2.3(1)                               --------->ABI4(1)     --------->DEAR4(2)                               ------>NtERF2        --------->ABI4(1)                              --------->RRTF1(2)    <---------ATERF1(1)                              --------->RAP2.6(2)   ------>NtERF2                              --------->RRTF1(3)   --------->DREB2C(2)                              --------->DREB2C(2)  --------->RRTF1(2)                              --------->RAP2.3(3)  --------->DEAR3(1)                              --------->RAP2.3(2)  <---------DEAR3(1)                              --------->DEAR3(1)   --------->ATERF1(2)                              --------->ATERF1(2)  --------->RAP2.6(2)                              <---------DEAR3(1)   --------->RAP2.3(3)                             --------->DEAR4(2)    --------->RAP2.3(2)                             --------->ATERF1(1)   --------->RRTF1(3)                             --------->RRTF1(1)   --------->ATERF1(1)                             --------->ERF1       --------->ORA47(2)                             --------->RAP2.6(1)  --------->RAP2.6(1)                             --------->ORA47(2)   --------->RAP2.3(1)                             --------->RAP2.3(1)  --------->ERF1                            ------>NtERF2         --------->RRTF1(1)                            --------->At4g35610   --------->DEAR4(2)                            --------->LBD16      <---------ATERF1(1)                            <---------ATERF1(1)  --------->LBD16                           --------->DEAR3(1)    --------->At4g35610                           --------->ANAC46      ------>NtERF2                          ------>ZmHOX2a(2)      <---------At4g35610                          --------->DEAR3(2)     --------->ABI4(1)             <-----------HVH21                          --------->MYB46(3)    --------->DEAR3(1)    <---------MYB52(1)                         <------ZmHOX2a(2)      --------->ANAC46     <-----------TGA1                        <---------ARR14(2)      <---------ALFIN1     <-----------HVH21 ----WRKY12             --------->ARR14(2)     --------->SPL7       --------->ANAC46 -->DOF5.7(2)         --------->DEAR3(1)--------->At4g35610    ------>ZmHOX2a(1) -ETT(2)          --------->MYB46(3)--------->ARR14(2)--------->RAP2.3(2)     --------->ANAC46  -----   acttctctccctctcttacaatcaccgatccgccgccgttaccgctccctccgccgccgtctctccttctccgtcattccccgtcggacttctcgctcct  13436700                                                                       ------>ZmHOX2a(1)                                                                      --------->TOE2(3)                                                                   --------->ARR14(2)                              <---------ANAC58                     <---------ARR14(2)                              <---------ANAC58               <---------ARR14(2)                   <-------TEIL        ---------->ID1     ====================HOX2a_HOX2a --------->ANAC46               <---------TOE1(2)<-----------GT1           ------>ZmHOX2a(2)               <---------- <---------ALFIN1<---------MYB52(1)--------------------->WRI1--------->ARR14(2)  <----------DOF2 ---- ->ZmHOX2a(1) <-----------RAV1(2)-------->P        <-----------GT1<---------MYB52(1)    <-----------GT1   tctccacttccaattctcaggtacttcttcttacttaccttgttctcttcaaattactgatccaatccgtttcctcaaatgtgcttaattttacacaatt  13436800                                                                              <---------ANAC55(2)                                                                              <---------ANAC46            --------->ARR14(2)                                                --------->ANAC55(2)            --------->GLK1(2)                  --------->ARR14(2)             <------MYB83 <-----------------AG ----------->GT1          <---------ARR14(2)             <------MYB46(1) <-----------------AGL1                        <-----------GT1                <---------ANAC55(1) -GT1       <---------ARR14(2)                <---------CCA1(2)<---------YAB1--------->MYB59       -- ----->YAB1<---------GLK1(2)  <---------At5g28300   <---------MYB52(1)       --------->MYB111(1)<----   catgaccaattcggaatctgtagatggagaattactgtaatgtgttttgtatccgtttgtgaattgtgattgtatagattaggtgttcgataaatgagcc  13436900  Previous    Next  AGI:  At5g35170.1    Description:  adenylate kinase family protein. similar to AMK2 (ADENOSINE MONOPHOSPHATE KINASE), adenylate kinase [Arabidopsis thaliana] (TAIR:AT5G47840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67723.1); contains InterPro domain Adenylate kinase; (InterPro:IPR000850); contains InterPro domain Adenylate kinase, subfamily; (InterPro:IPR006259); contains InterPro domain Adenylate kinase, zinc-finger lid region; (InterPro:IPR007862); contains InterPro domain Adenylate/cytidine kinase, N-terminal; (InterPro:IPR011769) Range:  from: 13436396    to: 13440976    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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