Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ----------->GT1                                  --------->LBD16                                 <---------LBD16                                <---------LBD16                              <---------ARR14(2)                           <-------TEIL                          --------->CCA1(2)                                                      <---                   --------->ANAC58                                                              ----       <---------ANAC58  <---------ARR11(3)                                                      ----       <---------ANAC46--------->ANAC58                                                          <---       <---------ANAC58--------->ANAC58      <----------DOF2                                   <----- ------ZAT2        --------->ANAC58    <---------ARR14(2)                              <---------AHL20(2) ------At4g35610   --------->ANAC46--------->LBD16                                    --------->AHL20(2) ----->At4g35610 <---------DOF5.7(2)   --------->ARR14(2)                     --------->YAB1   ------ ----->ZAT2    --------->DOF5.7(2)<---------HSFB2a(2)          <---------TOE2(3)    --------->TOE2(3)   gctgcaatggcttagatgttaacgcaagatacaatccgggaaatatgctttctcaacgctgatttgatgttattgatcagtgatcacattaaatccacga  13384100                   -------------->OsCBT                  ------>NtERF2                  <------NtERF2                <------NtERF2               ------>NtERF2                   <---------ARR14(2)               --------->ATERF1(1)             --------->ARR14(2)              <---------RAP2.3(3)              ------->TEIL      <---------ANAC58                      <---------ANAC58      <---------RAP2.6(2)                   <---------ANAC46        <-----------HVH21      <---------ANAC58                      <---------ANAC58        <-----------TGA1      <---------ANAC46                      --------->ANAC55(2)    --------->YAB1     <---------LBD16<----------DOF2         <---------ANAC55(2)  <---------ARR14(2) ------ZAT2   <---------PCF5           <---------ANAC58     --------->GLK1(2) ----->ZAT2--------->ALFIN1     ----------->RAV1(2)        --------->ARR14(2) ----->At4g35610<---------DEAR3(1)----------->HVH21        <---------ARR14(2) ------At4g35610--------->ATERF1(1)    <---------ANAC58    <---------GLK1(2) --PIF5  <---------ARR14(2)     ------>ZmHOX2a(1)<---------ANAC46--------->ARR14(2)       <---------YAB1 ->PIF5  --------->ALFIN1       --------->At4g35610     --------->YAB1                 --------->ICU4   gctgaattgcggtttggggccgcgttttgttctcctctgaagcttgacgtatcgtctagcagaatcgaatcgtcacatccctatatgtaagtatgaaaac  13384200                                                                                                    <                                                                                                   --                          --------->YAB1                                                           <-                         <---------YAB1          --------->ANAC58                                  <-                    <-----------GT1   <---------ANAC58                                ----------->HVH21            --------->ANAC58          <---------ANAC46         ----------->GT1      <---------At4g35610            --------->ANAC58<---------YAB1       --------->ANAC58  ---------->DOF2  --------->At4g35610       ---------->DOF2 <---------ICU4 <---------ANAC58    ---------->DOF2 --------->AHL20(2)---------   gtttagaagtaaagaagcaaaataaccattatactaagtttcttgaaatgcaaggaaaacaaaagaggtgaaagaaaaaaatgttatgctgacaaggtta  13384300                                                            ---------->DOF2                                                            ======================================bZIP_DOF                                                        <------ZmHOX2a(2)               <---------TGA1a                                                        --------->CCA1(2)               --------->TGA1a                                    <----------DOF2    <---------ARR11(3)               <---------O2                                    ===========================HOX2a_HOX2a              <---------ANAC55(2) ---------AHL20(2)                  ------>ZmHOX2a(1)  --------->ARR11(3)           <-----------HVH21 ------->AHL20(2)                ---------->ID1        --------->AGP1            ---------->DOF2 --------AHL20(1)             --------->MYB59         <---------GLK1(1)          =================bZIP_DOF --------AHL20(2)          --------->ICU4             --------->GLK1(1) <----------DOF2 --------->O2 -->GT1               --------->ANAC46       <---------TOE2(3)          ==========================bZIP_DOF   atttttttgcagagtttgatatataagtcattttggtccttttttttaagtttgagagatccaaaaggaagtcactttgaagtcaaagtcacatgagttt  13384400               <-----------GT1                                   <---------ICU4          <---------MYB59                                        --------->YAB1        <---------At5g28300                                     <---------ATHB12       <-----------GT1                                    <----------ID1    <---------ZAT6                                     --------->DAG2 <---------HSFB2a(2)           --------->AHL20(2)     ---------->DOF2  *TSS --------->HSFB2a(2)  --------->At4g35610  --------->MYB52(1) --------->WOX13(1)               <-----   tttctagagttaccgaattacatcttctgaagtttatatactacaaaacgactaccaaaagcgacaatcatcgtagtcgtcttcttgtgcgactatttta  13384500                 <---------bZIP60(1)                 --------->bZIP60(1)                 --------->ANAC58                 ----------->GT1                 --------->ANAC55(2)                                                       --------->ARR14(2)                 --------->ANAC46                                                   <-----------GT1                 <---------ANAC55(2)                                          <---------MYB52(1)                 --------->ANAC58        ------------>CBF <------------CBF    --------->DOF5.7(2)        --------->ANAC46        <---------ANAC46     --------->MYB52(1)      --------->TOE2(3)      <-----------GT1      <---------MYB46(3)      <---------MYB52(2)       ----------->GT1<---------ARR14(2) ------GT1     ------->GAMYB <---------MYB52(1) <----------ID1 <-----------HVH21    --------->MYB52(1)   caactattttacgacaacgacgtaactagtcgttgagtagtcgttcaatagcgactaacaaattgtgtcagaacataatcgttaattaacgagtatttga  13384600     --------->ARR11(3)                                             <----------DOF2     <---------ARR11(3)                                         ---------->ID1     --------->YAB1    --------->YAB1          <------NtERF2                  <----------DOF2   ------>NtERF2   <---------YAB1  <---------YAB1           <---------GLK1(1) <-----------RAV1(1) <---------YAB1  <--   tgcctatgatattgaatagagattatagtcgccaattgacgactacatttccgacttaattcttttgtcgcttatttggcgactataatacgactactct  13384700                                                                            <---------MYB59                                                                            <---------MYB111(1)                                                                           --------->ANAC55(1)                                                                           --------->ANAC46                                                                     <------MYB46(1)                                                                     <------MYB83                                                                    --------->MYB111(2)                                                                    --------->MYB46(2)                                                                    --------->MYB59                                                                    <---------MYB46(3)                                                                    --------->MYB111(1)                                                                    <---------------AtSPL8                                                                    --------------->AtSPL8                                                                    --------------->AtSPL3                                                                  <---------MYB52(1)                                                                --------->LBD16                                                               <---------LBD16   --------->YAB1     <-----------TGA1                                          <---------ANAC46  <---------ICU4     <---------RAP2.6(3)                                       --------->LBD16  --------->ICU4     <-----------HVH21                                        <---------LBD16 ------>MYB83    --------->bZIP60(1)   <---------ANAC58             <-----------GT1   --------->REM1(1)    --------->ETT(2)      <---------ANAC46          --------->MYB52(2)  <-------TEIL     --------->ZAT6    <---------bZIP60(1)   <---------ANAC58      <---------ANAC55(2)<--------P ------>MYB46(1)   ---------->ID1<------NtERF2                  --------->ANAC55(2)<---------MYB55(1) <-----------GT1 --------DOF2 --------->ATERF1(1)              <-------TEIL  <-----------------AGL1<---------YAB1----   cttttgtcgtcatgtagtcgcctaattgtcgtataatacatttgaaaaatacgttttttgcattcccgggtaggtacacctaattatgttacgactacaa  13384800                                                  <---------ALFIN1                                                 <---------ZAT18                                                 --------->ZAT14                                                 <---------ZAT14                                                <---------ALFIN1                                  <--                        --------->GLK1(2)      --------->ANAC46                               -------                       <---------GLK1(2)     <-----------GT1                             ------------                   ---------->DOF2    --------->YAB1                                   ----------->GT1                  --------->ICU4     ----------->GT1                --------->AHL20(2) --------------             --------->YAB1          <---------YAB1          --------->YAB1          ---------->DOF2 ------->RAV1(2)--------->YAB1    <---------AHL20(2)   <----------DOF2           --------->TOE2(3)---   cctgtagtcgtttaatagtcataaagaatcgtctatataatgaaaattcaccacactctttattcatcaataaaacaaaacaacatcaaaagaaaaaaaa  13384900                                                                                 <---------ARR14(2)                                                                                <-------GAMYB                                                                               <---------MYB46(3)                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                            ------------>AtMYB77                                                                           --------->ALFIN1                                                                         <---------MYB46(3)                                                                         --------->MYB52(2)                                                                        --------->ALFIN1                                                                <---------ICU4<---------ANAC46                                                               <---------ATHB12<---------DEAR3(2)                                                    <------NtERF2      <------NtERF2                                                    ----------->GT1    <-------GAMYB    --------->MYB52(1)                             --------->LBD16    <---------MYB46(3) --------ID1                                      <---------ANAC58   <---------RAP2.6(2) --->DOF2                                         <---------ANAC46   <---------ANAC46 ------------>ANAC81      ---------->DOF2         <---------ANAC58  --------->RAP2.6(3) <---------LBD16 ---------->ANAC81  --------->AHL20(2)           <---------LBD16--------->YAB1<---------RAP2.6(2) -------->GT1---------->DOF2        <---------AHL20(2)         --------->ICU4 <---------DEAR3(1)   gagaaaaaacgatttgaaagaaaaaaataaaagtttagtttattgtataatggcgggaaactacaatcatggcggtagtggcggtttctatcgggattgg  13385000  Previous    Next  AGI:  At5g35111.1    Description:  pseudogene, similar to peroxidase 6, blastp match of 72% identity and 1.1e-17 P-value to GP|5002334|gb|AAD37423.1|AF149281_1|AF149281 peroxidase 6 {Phaseolus vulgaris} Range:  from: 13383302    to: 13384471    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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