AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved TF binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
-------->ZAP1 <---------At5g28300 ---------WRKY18(1) ------->WRKY38(1) <---------ZAT14 <----- ------->WRKY45 --------->ZAT14 <---------ARR11(3) ------->WRKY12 <----------DOF2 --------->ARR11(3) --------->HVH21 --------->LBD16 <-----------GT1 --------->AHL20(1) -------DOF2 <---------LBD16 <---------YAB1 --------->AHL20(1) >GAMYB <---------ARR14(2) <---------AHL20(2) <---------AHL20(1) ->MYB46(3) --------->ARR14(2) <---------AHL20(2) <---------ARR11(3)
tttgaccgcctaaatttgcataagttccggtttactgtattgttttttatttttaactatataaaactttcttataagtcttaactcaatatatattctt	13250200
--------->AHL20(1) <---------AHL20(2) <---------AHL20(1) <---------AHL20(2) <---------AHL20(2) --------->AHL20(2) <---------AHL20(2) --------->AHL20(1) --------->AHL20(2) <---------AHL20(2) <-----------GT1 <---------TOE2(3) <---------AHL20(1) <----- --------->AHL20(2) <-----------GT1 <---------AHL20(2) <---------YAB1 ------->TEIL --------->ATHB12 ----------->GT1 --------->YAB1 ------ -----DOF2 <---------YAB1 <---------YAB1 --------->AHL20(2)--------->AHL20(2)-
tgatatgaatttaactaatttttgtttatgatttaacattttaatttttctaatagatagttatatataatttattatctataatattatattcaatatg	13250300
--------->YAB1 <---------YAB1 <---------AHL20(2) <---------AHL20(2) --------->AHL20(2) <---------At5g28300 <---------AHL20(1) <-----------GT1 --------->AHL20(1) --------->MYB46(2) <---------ANAC58 ----ANAC55(2) <---------AHL20(2) --------->MYB52(2) <---------ANAC58 --->ANAC55(2) ----------->GT1 <---------MYB52(1)----------->RAV1(2) -------->YAB1 <-----------GT1 ------>ZmHOX2a(1)<-----------HVH21 ------>NtERF2 -----
tattatattataaacttttaaactgtataaaatcgtctaaactcctattaagcattgtaggcgttaggcgctatgttaccgcctgcctagcgttttcttc	13250400
<---------STY1(2) --------->STY1(2) <---------ANAC58 <---------YAB1 --------->ATHB12 <---------ANAC58 --------->AHL20(2) <---------AHL20(2) <---------ANAC55(2) <---------AHL20(2) --------->AHL20(2) --------->ANAC55(2) --------->ANAC46 <---------AHL20(2) ---------->DOF2 ---->ANAC46 <-----------GT1 <---------DOF5.7(2) <-----------GT1 --------->YAB1
gacactgattttaagtaacatttcgagctagtctcattaacgcctctatttatatttgataattttactaattcatttttttatcttgatttgaaagaaa	13250500
------>ZmHOX2a(2) --------->GLK1(1) <------ZmHOX2a(2) <---------GLK1(1) <---------ARR14(2) <---------AHL20(2) <---------ARR11(3) --------->ARR14(2) ----------->GT1 --------->AHL20(2)<---------AHL20(2) <-------TEIL --------->ARR11(3) <---------YAB1 --------->AHL20(2)<---------AHL20(2) <-------MYC2 <-----------ARR10 --------->ATHB12 <---------AHL20(2)--------->AHL20(2) ------->MYC2 <---------ARR11(3) <---------YAB1 ----------->TBP --------->AHL20(2) <-------MYC3 <---------AGP1 ----------->GT1 <---------YAB1 <---------AHL20(2) ------->MYC3 --------->ARR14(3) <---------ZAT6 --------->YAB1 <----------DOF2 ---------->DOF2 --------->ZAT14 <---------ANAC46 --------->AHL20(2)<----------DOF2 --------->ARR11(3) <---------ARR14(3)
aatgttcagtggtaatatgattagtaaaattataaaaaaatttctttcttttattaaatacaaaagttcttaaaacgtgcagacttgaagatctccacaa	13250600
<---------ICU4 <---------YAB1 --------->YAB1 <---------ICU4 --------->YAB1 <---------YAB1 --------->YAB1 <---------ICU4 --------->YAB1 <---------ICU4 <----------DOF2 --------->At4g35610 <---------ICU4 ------>ZmHOX2a(2) <---------At4g35610 <---------YAB1 --------->ARR11(3) ---------->DOF2 <-------GAMYB <---------YAB1 <---------ARR11(3) *TSS <------NtERF2 --------->WOX13(1) <---------ATHB12 --------->YAB1
acctccaaaagtctattcaaatggcagagacagttgaatccatcatcatcatcatcatcgtcttctccaaatgatctttcaatctcattctcatcatctt	13250700
<---------ALFIN1 ------>ZmHOX2a(1) ------>MYB83 --------->At4g35610 --------->AtMYB61 <---------At4g35610 ------>ZmHOX2a(1) ------>MYB46(1) ------>ZmHOX2a(1) ------>ZmHOX2a(1) <<<<<<<<<TBF1 <---------MYB46(2) --------->TOE2(3) --------->YAB1 ------>ZmHOX2a(1)---------->DOF2 ------>ZmHOX2a(1) <----------DOF2 --------->WOX13(1) ------>ZmHOX2a(1) --------->MYB46(3) <-----------GT1
cttctctatcaatcctcatcttcctcctccttcttcttcctcccaaagctcatcaccaaacctcctctctccctctcatttacctctctttcctcaatgc	13250800
--------->O2 ------>NtERF2 <---------ALFIN1 --------->DEAR3(1) --------->DREB2C(2) --------->ANAC46 --------->ANAC58 ------->GAMYB --------->RAP2.6(2) --------->ANAC58 --------->DEAR3(1) <------------AtMYB77 <---------MYB55(2) --------->MYB46(3) --------->DEAR3(2) ------>MYB46(1) ------>ZmHOX2a(1) ------>MYB83 ------>MYB46(1) <---------ALFIN1 -------->P ------>NtERF2 <---------ALFIN1 --------->MYB55(1) --------->DREB2C(2) <---------ALFIN1 ------>NtERF2 --------->DEAR3(1) <---------ALFIN1 --------->MYB46(3) <---------ETT(1) --------->ANAC58 --------->DEAR3(1) --------->ANAC46 --------->ANAC58 ------>NtERF2 --------->At1g77200 --------->ABI4(1) --------->DREB2C(2) --------->DEAR4(1) ------>NtERF2 ------->GAMYB <---------ALFIN1 ------>MYB83 --------->AtMYB61 --------->ANAC46 --------->DEAR3(2) <---------ALFIN1 --------->RAP2.6(2) ----------->HVH21 ------->GAMYB ------ --------->DEAR3(1) <-----------TGA1 --------->ANAC58 ------ --------->MYB46(3) <-----------HVH21 --------->ANAC58 <----- <---------ATERF1(1) --------->ANAC46 <---------ALFIN1 --------->DEAR3(1) <---------ALFIN1 --------->AtMYB61 --------->AtMYB61 --------->ANAC46 <------
tcccttctctctctctctccaccgccaaccgccacctctccgtcaccgacaccatccctcttcccaactccaactccaacgccacccctcctctccgtat	13250900
- --- ---- ---- <--- ----- <---- ----- <------ <---------ATHB12 ==============HOX2a_HOX2a <------ZmHOX2a(2) <---------ARR14(2) ------>ZmHOX2a(2)< --------->ARR14(2) ==================HOX2a_HOX2a --------->ATHB12 <------ZmHOX2a(2) < --->ARR14(2) --------->TOE2(3) ===================HOX2a_HOX2a --->SPL7 <---------GLK1(2) <---------ANAC58 ----------->RAV1(1) <---------ARR14(2) - ----ARR14(2) <---------ANAC58 --------->ANAC46 --------->ARR14(2)-- ---CCA1(2) <---------HSFC1(2) --------->TOE1(3) <---------GLK1(2) --------->LBD16 ------>ZmHOX2a(1)
cgccatcatcggattcggaaactacggccaattccttgccgaaaccctaatttctcaaggccacattctcttcgctcactcccgatccgatcactcctcc	13251000
<---------ANAC58 <---------ANAC46 ----------->RAV1(2) <---------ICU4 ===================================HOX2a_HOX2a ------>NtERF2 ------>ZmHOX2a(2) <---------bZIP60(2) --------->DEAR3(1) ========================HOX2a_HOX2a <---------ALFIN1 <---------GLK1(1) <---------TGA2(2) ----->NtERF2 =========================HOX2a_HOX2a ------>RAP2.3(1) ====================================HOX2a_HOX2a ----->LBD16 <------ZmHOX2a(2) ----------->TGA1 -->NtERF2 <---------ARR11(3) ----------->HVH21 ------ATERF1(1) =================================HOX2a_HOX2a ---->DEAR3(1) ------>ZmHOX2a(2) --------->TGA2(2) -----ALFIN1 <------ZmHOX2a(2) <-----------TGA1 ---->ANAC46 ==================================HOX2a_HOX2a ---ATERF1(1) --------->ARR14(2) --------->ANAC58 <---------ZAT14 - ---------SPL7 --------->ARR11(3) --------->ANAC58 --------------->AtSPL8 < ---------At4g35610 <---------ARR11(3) --------->SPL7 ------>ZmHOX2a(1) ------>ZmHOX2a(1) -------->At4g35610 <---------ARR14(2) ------->TEIL <---------ANAC58 ------->TEIL - ------->DEAR3(1) <---------ZAT14 --------->ARR11(3) ------>ZmHOX2a(1)--------->ZAT14 <
gccgctcgccgtctcggtgtctcatacttcaccgatcttcacgatctctgcgaacgtcatcctgacgtagtccttctctgtacttcaatcctctccatag	13251100

AGI:	At5g34930.1
Description:	arogenate dehydrogenase. Identical to Arogenate dehydrogenase 1, chloroplast precursor (TYRAAT1) [Arabidopsis Thaliana] (GB:Q944B6;GB:O82603); similar to prephenate dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT1G15710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59808.1); contains InterPro domain Prephenate dehydrogenase; (InterPro:IPR003099); contains InterPro domain NADP oxidoreductase, coenzyme F420-dependent; (InterPro:IPR004455); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040)
Range:	from: 13250604	to: 13252797	Orientation: Forward
Links:	TAIR MIPS

Please cite the corresponding publications when using AthaMap.

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