Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->AtMYB61                                                                    ------->TEIL        --------->TOE2(3)                                          <---------ALFIN1  --------->ANAC58                                              <--------P                 <---------  --------->ANAC46                                        ----------->RAV1(1)       <---------ICU4  --------->ANAC58                                       --------->REM1(1)       --------->YAB1 --------DOF2                                          <---------HSFB2a(2)      <-------TEIL        < --->GLK1(2)                       <----------DOF2     --------->HSFB2a(2)  <---------ARR11(3)   ----   ctttacgcaaacttaaacctatactgtcttcccattcctttttaaactgactatgttctacaacaggttgcacctcaacatattcatcatccctatcaga  13246500                            --------->ANAC55(2)                    <-------MYC3                    ------->MYC2                    ------->MYC3                                                                  <--                    <-------MYC2                                                       <---------At4g35610                 <---------ALFIN1         <-----------GT1                              --------->At4g35610     <---------CCA1(2)<-------TEIL<-------TEIL                                      ------>ZmHOX2a(1) --HVH21--------->TOE2(3)   <---------ANAC55(2) --------->TOE2(3)                  --------->TOE2(3)< -----------GT1<---------ALFIN1  --------->CCA1(2)          ------->GAMYB       <-----------GT1   --- ----->CCA1(2)XXXXXXXXXXXXXXXXXXXX>MIR774B*   ------>NtERF2--------->ANAC46   <---------AHL20(2) <---   tatatccataccttcatccacacgttcatcacgagatacatttttagccacctaaatatcaacgacatccactatctgattttatcctcatctgaatgca  13246600                                                                                  --------->YAB1         <---------ICU4                                                        --------->WOX13(1)        --------->ICU4                                                     ------>MYB46(1)  --------->LBD16                                                          ------>MYB83 <---------ANAC46                                                        --------->AtMYB61        <-- -------ARR14(2)                                                      <-----------GT1            <--- ---------LBD16                          ---------->DOF2             ----------->HVH21          ----- ------>ARR14(2)                ------>ZmHOX2a(1)                  --------->CCA1(2)           <----- ------GLK1(1)               ---------->ID1                     ----------->ARR10<---------ATHB12----   gttccgcataattcttactaacaaaacttttgtcctctctagataaaggctcgggcaatttagacttagatatgacctccccaatcaaaacacttctacg  13246700                                                              ========================RAV            --------->ANAC58                                  ----------->RAV1(2)         ------->GAMYB                          --------->GLK1(1)         <---------SPL7                         <---------RVE1(1)        --------->MYB46(3)                     --------->ARR14(2)        <---------MYB52(2)                     <---------ARR11(3)       <---------At4g35610                     <---------GLK1(2) -------MYB52(1)                               --------->ARR11(3) ----GAMYB  --------->ANAC58                   <---------ARR14(2)                      <-----------GT1 ------>GT1--------->SPL7             <---------YAB1          ------>ZmHOX2a(1)     ----------->GT1 ----TOE2(3)--------->ANAC46      <---------ANAC58    <---------CCA1(2)   ----------->RAV1(1) ----->At5g28300 --------->REM1(1)<---------ANAC58 <-------TEIL          --------->MYB46(3)   gttattttcaacggacgctacaataaacttgaacatccttgtcattacagatattcatctcttcctctggtcccaacaacattgcattgtaactcatttg  13246800                                          <---------TOE1(2)                                     <---------ARR14(2)                                     --------->ARR14(2)      <---------MYB59               <---------GLK1(1)      --------->TOE2(3)             <---------CCA1(2)                                  <---------ICU4      --------->TOE1(3)            ------->TEIL                          <----------DOF2  *TSS   <-----------GT1           <-------TEIL------>ZmHOX2a(1)          ------>ZmHOX2a(1)  --------->YAB1   caatttaaccttactctcatctaatccaagcttcatgtatatcctagcttctaatatggagagagtaatcctctcctttgatgtcttcatcatcaaacta  13246900                                                        ------>MYB46(1)                                                        ------>MYB83                                                      --------->MYB46(3)                                                      <---------MYB59                                                      <---------MYB111(1)                                                      <---------MYB46(2)                                                    -------->P                                                    ------>MYB83             <---------ARR14(2)                     ------>MYB46(1)             --------->ARR14(2)                    ------>ZmHOX2a(1)                          <------         <-------TEIL                 <----------DOF2 <---------MYB111(2)            <-----------GT1    ----------->RAV1(1)   --------->YAB1      <---------CCA1(2)                   <---------ICU4   ----------->HVH21  --------->AHL20(1)  <------------CBF                       --------->ICU4   tagatgcgacattcgtatttgaaatatatgatcacgttctctttcattgtatcctaccaaacaaaaaacaaaacaactatgtcagtattactagttttac  13247000                                       --------------->AtSPL8                                       <---------------AtSPL3                                       <---------------AtSPL8                                    --------->DAG2                                 <---------------AGL15                                 ============================MADS_MADS                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                              <---------ARR14(2)                              --------->AGP1 <---------------AGL15                              --------->ARR11(3)       --------->ZAT14        <---------AGP1 --------------->AGL15--------->ZAT6       <---------ZAT14        <---------ARR11(3)         --------->ZAT6 -----GT1            <---------YAB1---------->DOF2     --------->YAB1    --------->YAB1  ------>ZmHOX2a(1)   taattctactacagtttatagttatactagtagatctaaaagtagtacttatatcagtaatactagtaacactagtcatactactactatcctgccaaga  13247100              <-----------GT1                                                                       <           ----------->GT1                      <---------YAB1--------->ARR14(2)            ---------           --------->YAB1          --------->YAB1             <---------ARR11(1)       ----------->GT1 <---------ATHB12         <----------DOF2    --------->ICU4   <---------ARR14(2) <---------ATHB12 <--   ccaatgacttcaattgtaactagttctactttcgcgataagaacataattttgattcgggtccaaatctacaattcaagacgaatcaatatgtgaaatcc  13247200       --------->ATHB12       <---------ICU4   <-----------GT1                                       --------->ZAT18 ---------MYB46(3)                                     <---------------AtSPL8 >GLK1(1)   --------->At4g35610      <---------YAB1    --------------->AtSPL8              <---------AHL20(2) -------MYB52(1)              ---------->DOF2         --------->ALFIN1           <---------YAB1------   atttgttactcattagcagaacaaatcgattctaaagctatgcttaaactttcaatgtgggtactaaaacaaaaaacacaaatctaattggatttaatct  13247300                                                                                          <---------At4g35610                                                                                          --------->At4g35610                                                                                          <---------ZAT2                                                                                    <---------ATERF1(1)                                                                                   <---------DEAR3(1)                                                     --------->At4g35610           <---------ETT(2)                                                     --------->ZAT2                --------->ETT(2)                                    --------->ARR14(2)                             <---------WRKY12                                    --------->GLK1(2)<---------At4g35610  <----------DOF2 --------->ZAT2                                    <---------ARR14(2)              <---------MYB59<---------WRKY38(1)                           ---------->DOF2           <---------ZAT2 --------->TOE1(3)    ------->TEIL --->TOE2(3)        --------->WOX13(1)              ------->TEIL    --------->TOE2(3) --------->ANAC46   caattgaatcactaaaatttgtcaatccaaaaagagcgaatttgaagctctatgcagctagagaaatatacctaaactttcaaggtcgacgcagcttggc  13247400  Previous    Next  AGI:  At5g34925.1    Description:  transposable element gene. Mutator-like transposase family, has a 7.3e-38 P-value blast match to O80466 /172-336 Pfam PF03108 MuDR family transposase (MuDr-element domain) Range:  from: 13246087    to: 13246890    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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