Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                             --------->At5g28300                       --------->TOE2(3)    --------->RAP2.6(2)              --------->AHL20(1)            ----------->GT1              <---------AHL20(1)       --------->DEAR3(2)          <---------AHL20(2)          ------->TEIL       <---------bZIP60(2)          <---------ICU4      --------->CCA1(2)        --------->YAB1         --------->AHL20(2)  --------->ARR11(3)       <---------ATHB12                 --------------       --------->YAB1  --------->TOE1(3)--------->DEAR3(1)                      --------->TOE1(2)      --------->AHL20(2)     <---------ARR11(3)---------->DOF2    ---------->DOF2      <-------TEIL ------>MYB59--------->AHL20(2) <---------AHL20(2)    --------->ICU4     ---------->DOF2--------->YAB1   aaggtcgattaataaatatataaaaccttaagatataatgaaccggccgtaaaacaatgatgtgcccataaaccgaaaagaacatgggattcataaatag  13111200                                                                                <---------TOE2(3)                                                                               <---------LBD16                                                                           <---------YAB1                                                                          --------->AHL20(1)                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)                                                                        <---------AHL20(2)                                                      --------->ANAC58  <---------AHL20(1)                                                      --------->ANAC58  --------->AHL20(2)                                                  --------->YAB1     --------->AHL20(2)    --------->YAB1           --------->AHL20(2)  <---------YAB1<---------ZAT18<-----------GT1       < --->AGL3                ------->TEIL      --------->GLK1(2) --------->At4g35610<---------ANAC46   <-   tgacagtcagaacattacaaacttatgaacatataatatagcgagaatttgatgataagaaacagcacacataaattattttacggataacttaaatttc  13111300                                                        <---------GLK1(2)             xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------ANAC46                <--------P ---------ICU4                               <------NtERF2                      <---------YAB1      - --------MYB52(1)                         <------ZmHOX2a(1)             <---------ARR14(2)          -   agttattacatagtaaaccaaaaaatccctcgcacaagtcttgaggaggcatggagtagaatttcacatgagcaaatttgttctggttgcagagtttttt  13111400               <---------TOE2(3)              --------->DAG2             --------->MYB52(1)        <----------DOF2                                    --------->ANAC46             ---------->DOF2      <-----------GT1   <xxxxxxxxxxxxxxxxsmallRNA(i)          --------->ANAC58 <---------ATHB12                <-----------GT1  --------->ATHB12                        --------->ANAC58 -------->ANAC58            <----------DOF2      --------->ICU4                      <---------SPL7 -------->ANAC58           <---------DAG2    --------->ZAT18    --------->ICU4      --------->YAB1   gcaagcattctcacataaaggaagagttgcctttttaaacacttttatgcactgatttgggacacaatgtttaacacatatttctatcgtactcgcaaat  13111500                   --------->DAG2                  ---------->DOF2            --------->TOE2(3)                         --------------------->WRI1           ----------->GT1   --------->YAB1          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)        --------->YAB1      --------->ICU4          <---------YAB1     --------->ATHB51        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)        <---------AHL20(2) --------->ATHB12    <---------YAB1       <---------YAB1       <---------ATHB12    <----------DOF2       --------->ICU4  ------->TEIL    --------->MYB46(3)    --------->YAB1     <---------ARR11(3)       <---------MYB52(1)<---------AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)        --------->ARR11(3)    <------NtERF2 --------->CCA1(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <---------CCA1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   gttgaaaccatcatcgtaaataaagctacaatgatcaaaacactgtatatcttttttattgtttgagtcgccattatttgaagagatgaatttatgagtg  13111600                                                     --------->ATHB12            --------->ARR11(3)                      <---------YAB1            <---------ARR11(3)           <---------ICU4         <---------AHL20(2)             <---------ATHB51         --------->AHL20(2)             <---------AHL20(2)        --------->YAB1                  --------->AHL20(2)       <---------YAB1                 --------->YAB1--------->ICU4     <----------DOF2   <-----------  <---------At4g35610         ----------->GT1     <------ZmHOX2a(1)   <---------ANAC58   <----------DOF2 <---------TOE1(3)       <-----------TBP--------->ICU4    <---------TOE2(3)              ------------ <---------TOE2(3)    <---------ZAT6--------->AHL20(2) <---------YAB1 <---------ANAC58<-----------GT1   tttaagcttattaaaatcttgtttgtgttatatagcaaaaaaataattagcaggatgattaatgttgagttggcttttaaaactatttttactttctata  13111700                        --------->AHL20(2)                          ------>MYB83  <-------TEIL                        <---------AHL20(2)                          ------>MYB46(1)                       <---------AHL20(2)                          --------->MYB55(1)               ------>ZmHOX2a(1)                                 --------->MYB46(3)               <----------DOF2                              --------->YAB1        <---------ZAT18            ---------->ID1       <---------HSFB2a(2)      <------------CBF<----------DOF2        <---------AHL20(2)  --------->AHL20(2)          <---------YAB1 ----------->GT1 ----AGL15 <-----------GT1  <---------AHL20(2)       <-----------GT1--------->MYB52(1)         ------ --->AGL15<-----------GT1  <---------AHL20(2)  ---------->ID1  <-----------GT1<-----------RAV1(1)   gcaaaactatttttatccttttaaaattatttattttggaagtttatttgttttttttcttattgtaaccaaacggttttttggtgcatttgtttactaa  13111800                                                                             <---------ANAC46                                                                        ------>MYB83                                                                        ------>MYB46(1)                                                                      --------->TOE2(3)                                                                      --------------->AGL15                                                                      <---------MYB46(2)                                                                      <---------MYB111(1)                                                                      <---------MYB59                                                                      <---------------AGL15                                                                     ----------------->AGL1                                                                     <-----------------AGL2                                                                     <-----------------AGL1                                                                     ----------------->AG                                                                    ------>MYB46(1)                                                                    ------>MYB83                                                                    -------->P <---------ANAC46 <----                              ------------>CBF                    <---------MYB59 ---------->DOF2<---                 <------------CBF        ------>ZmHOX2a(1)        <---------MYB111(1)          ------   --------->MYB52(2)       ------>ZmHOX2a(1)               --------->ANAC58 <------MYB83  <---------At4g35610 <---------MYB52(1)        <---------MYB59     <---------GLK1(2)  <---------MYB46(2)   <---------REM1(1) --->YAB1     --------->ANAC55(2)--------->GLK1(2)          --------->ANAC58 <------MYB46(1)   <-----   taagttagttttttttatgtattggctgtcctaacaatctatcctttcaaattcttgttgtcaagaaacctacctaatttggtgtaaagttgtagatgat  13111900                                                                  ------>ZmHOX2a(1)         --------->At5g28300                                      <----------DOF2         --------->LBD16                                       ------>MYB83        ----------->GT1                   --------->ZAT18      ------>MYB46(1)        --------->TOE2(3)       --------->ZAT18  --------------->AtSPL3      <---------At5g28300       --------->SPL7   --------------->AtSPL8   <----------DOF2       --------->At4g35610     <---------------AtSPL3                          <--- -----YAB1               <---------At4g35610 --------->ANAC46--------->AtMYB61                <------ ------ICU4             ------->TEIL   ---------->DOF2       ------->GAMYB                   -------- --->ARR11(3)         xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->MYB46(3)   <---------ARR11(3) ----ARR11(3)  <-------TEIL --------------->AtSPL8   ------->TEIL--------->TOE2(3)   ---------->DOF2-   catttctttaccgtaaatacatgctgcatctgagtaccccaaaatgcacaaaacgtacttcaaccatcctttatatgaaacaagaactaaagaaatttta  13112000                   --------->ARR14(2)                   <---------ARR14(2)                 <------MYB83                 <------MYB46(1)               <--------P              <-------GAMYB          <---------ICU4          -------->HAHB4          --------->YAB1         --------->ICU4         <---------YAB1         <---------ATHB12        <---------TOE2(3)       --------->YAB1     <---------AHL20(2)     --------->AHL20(2)                               --------->ANAC58  <---------ARR11(3)                                  --------->ANAC58  <---------AHL20(1)                      <---------YAB1  --------->ARR11(3)     --------->HSFB2a(2)          --------->ANAC46  --------->AHL20(1)     <---------HSFB2a(2)   <---------ARR11(3) ------YAB1  --------->MYB55(2)        <------ZmHOX2a(2) ---AHL20(2) --------->ATHB12         --------->ARR11(3)                                         <--- ->AHL20(2)  <---------MYB46(3)       <---------ARR11(3)       <---------bZIP60(1)       ---------->DOF2 ------>TEIL<---------YAB1      --------->YAB1 <---------AHL20(1)                       <---------AHL20(2)   tgaatattttaatgatggttggaactgctagaaataataagatcatcaatatatacaagaaaatgaagtcagagattaccatcagtagatttaaaggagt  13112100  Previous    Next  AGI:  At5g34828.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G58242.1) Range:  from: 13111299    to: 13111574    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version