Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                 --------->ANAC58                                                                                 --------->ANAC58                           --------->YAB1         <------ZmHOX2a(1)     ---------->DOF2        ------              <---------ARR11(3)    <----------DOF2 <------ZmHOX2a(2)--------->YAB1--------->YAB1 ----ICU4  --------->TOE2(3)  <---------ICU4  ---------->DOF2     <---------HSFB2a(2)          ------ ---ATHB12--------->YAB1  <-------TEIL       <---------AHL20(2)   --------->HSFB2a(2)     <---------AHL20(2)   ttccagtctctaacattatctatctacattcatcttcactttgaaatttaaaggatcaaaatcaacttctataacaaagtatcaagcatcattttatcct  12105400                                       <---------ARR11(3)                                       --------->ARR11(3)                      ======================          <-------TEIL         --------->HSFB2a(2)                             ------>ZmHOX2a(1)     <------ZmHOX2a(1)         <---------HSFB2a(2)                         --------->ARR11(3) ------- <---------ATHB12              --------->LBD16        ---------->DOF2    ------->TEIL         ------- ->ZmHOX2a(1)              <---------ARR14(2)<---------ANAC46     <------ZmHOX2a(1)        ---------- --->TOE2(3)               --------->GLK1(2) <---------ANAC58   <---------TOE1(3) <---------ZAT18 --->TOE1(3)               --------->ARR14(2)<---------ANAC58   <---------TOE2(3) --------->ZAT14   caaatcaggaaattcatagagaaactaagtatccgagaagagaacttacgcgtgagcaaaggccttaaggaaatgaacatcctgtgcaatatactgacga  12105500                       <---------MYB46(3)                       ------>NtERF2                       <---------ATERF1(1)                       <---------ERF1                      <---------DEAR3(1)                      <---------ATERF1(2)                      <---------ANAC46                      --------->ATERF1(2)                     --------->ATERF1(1)                    <---------RAP2.3(1)                    <---------ATERF1(1)                    --------->LBD16                    ------>NtERF2                   <---------LBD16                   <---------RAP2.3(2)                   <---------RAP2.6(2)                                                         <-----                  <---------LBD16                                                              ------      --------->ARR11(3)                                                                       ------      <---------ARR11(3)<------NtERF2                                                         <------      --------->ARR14(2)<---------At4g35610                                                   -------      <---------ARR14(2)--------->At4g35610                                                  <------- ==============HOX2a_HOX2a                                                               <---------ANAC58 -->ANAC58     <---------GLK1(1)    <------NtERF2                                        <---------ANAC58 -->ANAC58     --------->GLK1(1)  <---------DEAR3(1)                                   <-----------ARR10 ->TGA1 ------>ZmHOX2a(2)       --------->MYB52(1)                                 ------>ZmHOX2a(2)   aatgtgtcgatcttgagatttccggcggctaaacagacggcgaaggggctatagatagagaagagacactctctgttaaacttgatccatagcttccctg  12105600                                                          <---------ICU4                                                          --------->ATHB51                                                          --------->ATHB12                                                      <---------MYB52(1)                                                      ------------>ATHB5                                                      <------NtERF2                                                     <-----------TGA1                                                     ------>NtERF2                                                     <---------RAP2.6(3)                                                    --------->DREB2C(2)                                                    --------->RAP2.3(3)                                                    --------->RAP2.3(2)                                                    --------->RRTF1(2)                                                    --------->DEAR3(1)                                                    --------->RAP2.6(2)                                                    --------->RRTF1(3)                                                   --------->RAP2.3(1)                                                   --------->RRTF1(1)               <---------LBD16                                                   --------->ERF1                  --------->MYB52(1)                                                 --------->DEAR3(1)          ------>ZmHOX2a(2)                 <------MYB46(1)                 ------->GAMYB              <------ZmHOX2a(2)                 <------MYB83                   --------->MYB46(3)         --------->ARR14(2) ----HSFB2a(2)  --------->MYB111(1)             --------->ATERF1(1)        <---------ARR14(2) --->LBD16      --------->MYB111(2)             --------->SPL7            <---------SPL7 --->HSFB2a(2) --------->ALFIN1                 --------->DEAR3(2)    <---------DEAR3(1) ---LBD16      <--------P                      <---------ATERF1(1)   --------->ATERF1(1) -->LBD16  --------->LBD16                --------->DAG2 --------->ICU4  --------->DEAR3(1)  -------- --ANAC46 <---------TOE1(1)              ---------->DOF2 <---------YAB1 <------NtERF2 --------->LBD16   gaagtgcttcttccgaggtagggggaatcgacaacgatgaagagaaagcgaccgccgtcattattggagtagtcgccgatcggaagaccggagacttggt  12105700                               --------->ALFIN1                               <---------ANAC46                             <---------ANAC58                                        ----------------                             <---------ANAC46                                --------->ALFIN1                           <---------MYB46(3)                               <-------MYC2                          --------->ALFIN1                                  <-------PIF5                          <---------DEAR3(1)                                ------->MYC2                          <---------AtMYB61                                 ------->PIF5                         <---------ABI4(1)                                  <-------MYC3                       <---------DEAR3(1)                                   ------->MYC3                       --------->ALFIN1                                    <---------TGA1a                       <------NtERF2                                       --------->TGA1a                      ------>NtERF2                                        --------->ALFIN1                  <---------DEAR3(1)    ------>ZmHOX2a(2)                  <------NtERF2                  ==================================HOX2a_HOX2a            ==========================                  ------>ZmHOX2a(2)    <------ZmHOX2a(2)                   <---------ANAC46                 ===================================HOX2a_HOX2a            <---------ANAC58                 <------ZmHOX2a(2)    <---------ARR14(2)                   <---------ANAC58                <-----------ARR10--------->ALFIN1                         ------>NtERF2<------ZmHOX2a(1)                --------->ARR14(2)    --------->ARR14(2)                 <---------ANAC58                <---------ARR14(2)   <---------GLK1(1) --------->CCA1(2) <---------ANAC46 <---------ARR14(2)  --------->DEAR3(1)=============HOX2a_HOX2a          <---------ANAC58       ----- ->ALFIN1  --------->MYB52(1)<---------ANAC58<------ZmHOX2a(1)<---------MYB46(3)<XXXXXXXXXXXXXXXXXXXXMIR408   gcgaaaccagagagaacggatcggcgcggtggtgtgtggagatcggaggagaccgagagatgagttgttgatgaggcgcgtggggaagaggaagcgcata  12105800                                                <----------DOF2                                               <---------ANAC46                                               <---------ANAC58                                               <---------ANAC58                     <---------DAG2                                           <---------HSFC1(2)                     ------->TEIL                                           <------MYB83                         <---------ZAT18                                           --------->HSFB2a(1)                  --------->ZAT18                                           <---------HSFB2a(1)                 --------->ANAC58                                    <---------AtLEC2<---------MYB46(3) <---------TGA1a                                  <---------YAB1=================================bZIP_DOF                            <---------TOE1(2) <-------TEIL             <---------O2 <----------DOF2                    --------->ARR11(3)     <------MYB46(1)      <-------TEIL   --------->ANAC58 -------->ANAC81    <---------ARR11(3)--------->ANAC58 ==========================MYC_MYB ========================bZIP_DOF*TSS --------->ANAC58 <--------P      ========================bZIP_DOF ---->AHL20(2)---------->DOF2  <---------MYB52(1)  <---------ANAC46  --------->CCA1(2)         <-----   aaatgagagagaaggcaaaagagagcttcgctcgttatgcaaggaaggtgcttgtgggtagatagatgcagagacgagagaacgcacttttttgttattt  12105900                                                     <---------TOE1(2)                                          --------->YAB1                                      <---------AHL20(2)                                     --------                                      --------->AHL20(2)     <---------ICU4                  --------                                     --------->AHL20(2)    --------->ANAC55(2)            --------->YAB1                              ----------->GT1      <---------TOE2(1)                     <---------YAB1                 ---------->ID1      <---------AHL20(2)    <---------ANAC58            <-----------GT1                 <-----------GT1     --------->AHL20(1)    <---------ANAC58  <---------AHL20(2) <----      <------------CBF     --------->At4g35610     <---------TOE1(1)        --------->AHL20(2)  ----- ------GT1      <-----------GT1      <---------AHL20(1)    <---------ANAC55(2)   <---------AHL20(2)   cccttgtaaattgttttttttcccttctcaactggataatttatttatcatgtactaggttacttatcacttatgagatttattttatattacaataata  12106000                                                                      ------>MYB46(1)                                                                      ------>MYB83                                                 <-----------GT1    <---------MYB59   ----------->GT1                                 --------->AHL20(2)                 <---------------AGL15                                 <---------AHL20(1)                 --------------->AGL15                                 <---------AHL20(2)                <-----------------AGL1  <---------ARR11(3) ->YAB1                   <---------YAB1  <---------AHL20(2)       ----------------->AG--------->TOE2(3) ->AHL20(2)--------->ANAC55(2)  --------->AHL20(2)                 ----------------->AGL1 <---------CCA1(2) -----AHL20(1)      --------->ARR11(3)--------->AHL20(2)         <-----------GT1  <---------AHL20(2) ---->AHL20(1)    <---------TOE2(3)   <---------AHL20(2)----------->GT1     <-----------GT1--------->ARR11(3)   tttttaaaaacttatgtattaagttattgtgatattaaatttaaatatttgatactatttgtaaattttaccaaattttgacattatatcgtaaatcttt  12106100                                          <---------ICU4                                          --------->YAB1                                      <---------YAB1                                     --------->ARR11(3)        --------->AHL20(2)         <---------TOE1(3)                    <---------DAG2       <---------YAB1              <---------TOE2(3)                    <---------------AGL15     <---------ICU4             --------->AHL20(2)                      <----------DOF2     -------->ATHB1         <---------AHL20(1)                    --------------->AtSPL8    <---------YAB1          --------->AHL20(2)                    <---------------AtSPL8    --------->AHL20(1)      <---------AHL20(2)                    --------------->AtSPL3    --------->AHL20(2)   --------->YAB1  --------->ICU4 <---------AHL20(2)                     ------    <---------AHL20(2)   --------->AHL20(2) <---------YAB1--------->ARR11(3)                ---------    --------->ICU4    --------->YAB1 <---------ARR11(3)--------->AHL20(1)              ---------->DOF2  <---------ICU4   --------->YAB1  <---------YAB1      <---------AHL20(1)        --------->ARR11(3) --------->ICU4   --------->AHL20(2)--------->YAB1     --------->AHL20(2)        <---------ARR11(3)   gtcaaaattattaaaaacgattaataataaaaaatttaagataattatgtttgaaaatataatcttgtgaagtactttttcaagataataaaagcattaa  12106200                                                         --------->ATHB12                                                         <---------ICU4                                                        --------->AHL20(1)                                                        <---------AHL20(2)                                                        --------->ICU4                                              <---------TOE2(3)                                              <---------TOE1(3)                                             <---------At5g28300                                        <---------AHL20(2)                                        --------->AHL20(2)                                        --------->AHL20(1)                                          -                                       --------->AHL20(2)--------->ATHB51                        ----                                       <---------AHL20(2)-------->ATHB1                          ----                                      <---------AHL20(1)<---------ATHB51           --------->ZAT14  <                          ----------->GT1   <-----------GT1       <---------TOE2(3)<---------ZAT14  <  --------->ZAT18  ----------->RAV1(1)--------->AHL20(2)<---------YAB1----------->GT1------->TEIL<--- --->YAB1         <----------ID1<-----------GT1       <---------ICU4--------->ARR11(3) <----------DOF2 >TOE2(3)--------->AHL20(2)  --------->YAB1 --------->MYB52(1)    <---------YAB1 --------------->AtSPL8   taagtgaacaaaaaaatgaaacaacaaatagttataacaaaataatttacggttcaaaattattgtttaagatagtgactaaaactgtactttaaaaaat  12106300  Previous    Next  AGI:  At5g32470.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO22231.1); similar to unknown [Populus trichocarpa] (GB:ABK95127.1); contains InterPro domain TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); contains InterPro domain Haem oxygenase-like, multi-helical (InterPro:IPR016084) Range:  from: 12102129    to: 12105833    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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