Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <xxxxxxx                                                                                         --------->ATHB12                                                                                         <---------MYB46(3)                                                                                        <---------YAB1                                                                                      xxxxxxxxxxxxxxx                                                                                     --------->ALFIN1                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                             xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                            ---------->DOF2       <---------TOE1(2)                  xxxxxxxxxxxxxxxx>smallRNA(i)       ----------->HVH21           ------>ZmHOX2a(1)             xxxxxxxxxxxxxxxx>smallRNA(i)       --------->ARR11(3)              --------->TOE2(2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------ARR11(3)            <---------YAB1 xxxxxxxx        --------->GLK1(1)             <xxxxxxxxxxxxxxxxsmallRNA(i)          --------->YAB1   xxxxxxxx        <---------GLK1(1)      <---------ARR14(2)  <----------DOF2         <---------ATHB12<---------WOX13(1)   gagaaaccagaaatctcatttctgagtcttgcagttttggcattggagaagaactttgacagaaaagccttcttacaatcatcctaggtggtgattgagt  12058200                                                                                                   <-                    --------->ARR14(2)                                                             <-                    <---------ARR14(2)                                                            <--          xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                     ---        --------->GLK1(2)                                                                         ---       <---------GLK1(2)                                                                          ---       --------->ARR14(2)                                         <---------ARR14(2)              ---       <---------ARR14(2)                                   <---------ZAT2                       <---      <---------At4g35610          <------NtERF2            --------->ZAT2                 ------>ZmHOX2a(2)     ----------->ARR10          ---------->ID1        --------->MYB52(1)                 --------->ARR11(3) xxxxxxxxxsmallRNA(i)          <-----------HVH21    --------->MYB46(3)           --------->bZIP60(1) xxxxxxxx>smallRNA(si3)       <-----------RAV1(1)   <---------MYB52(2)         <xxxxxxxxxxxxxxxxxxxxx xxxxx>smallRNA(fl3)<---------ARR11(3)   --------->YAB1 --------->ANAC46xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xx>smallRNA(fl3)--------->HSFB2a(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)----------->HVH21 <---- xxx>smallRNA(si3)--------->LBD16 ------>NtERF2   xxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxx xxxxxxxx>smallRNA(s)       <----------DOF2    ----------->GT1    --------->ARR14(2)<xxxxxxxxxxxxxxxx xxxxxxxx>smallRNA(i)--------->CCA1(2)  <xxxxxxxxxxxxxxxxsmallRNA(s)   <---------MYB52(1)<---------ARR11(3)   catggggcagattcttctcccagatatgtgctttgtcgcccaaggagaatggaaacaaacggagcttgaatccgttttcactgacaccattgatcttcgt  12058300                                           ------>ZmHOX2a(1)                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                         ------>ZmHOX2a(2)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                        <------ZmHOX2a(2)                                       <---------ARR14(2)                                       <---------ARR11(3)                                       --------->ARR14(2)                                     ----------->ARR10<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    --------->ALFIN1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->ARR11(3)    xxxxxxxxxxxxxxxx>smallRNA(s)  <---------ANAC46   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -----MYB46(1)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -----MYB83xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------AtMYB61              <---------MYB46(3)      --------->ANAC58 ------>MYB59               --------->ALFIN1         --------->ANAC58 ------>MYB52(2)            <---------AtMYB61--------->ATHB12 ------>MYB111(1)          xxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------>MYB46(2)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   --------->YAB1 ------MYB55(1)        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               --------->LBD16 xsmallRNA(i2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                <---------LBD16 -----MYB52(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxsmallRNA(i2)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               ----------->RAV1(2) xxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   taggttgcagagcctatcgaattcatcaaggtggtcgagtggatcctccattggcaaaccatggaatttgttcccctgaatcatcgagatgagacaactc  12058400                                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                     <---------At4g35610                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                              --------->ALFIN1                                                             <-------MYC3                                                             ------->MYC3                                                             <-------MYC2                                                             ------->MYC2                                                             ------->PIF5                                                             <-------PIF5                                                            <---------TGA1a                                                            <---------O2                                                            --------->TGA1a                                                            <---------ANAC55(2)                                                            <---------ANAC46                                                            <---------bZIP60(2)                                                            --------->ANAC55(2)                                                            --------->O2                                                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    <---------GLK1(1)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                             --------->ALFIN1          xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            <------ZmHOX2a(1)          xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                         <-----------RAV1(2)          xxxxxxxxxxxxxxxx>smallRNA(s)             xxxxxx                       xxxxxxxxxxxxxxxx>smallRNA(s)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <xxxxxxxxxxx                  --------->HSFB2a(2)                --------->At5g28300                <---------AtLEC2                  <---------HSFB2a(2)           ----------->HVH21    --------->At4g35610<---------ANAC58                 <---------LBD16 <-------TEIL ------>ZmHOX2a(1)   <-------TEIL          <---------ANAC58  --------->TOE2(3)  xxxxxxxxxxxxxxxx>smallRNA(s)--------->MYB52(1) ------->TEIL  <-----------RAV1(1)   ttaatctcaaaattgttgttctggatagcaggaggtgcaattcccttcctctaacggtgatcacgtggtgcatctccagcaccaatgttggcatggccat  12058500                                     <---------TOE2(3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                  <---------MYB46(3)                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                  <--------P                                  <---------ANAC46                                      <-------GAMYB                                 --------->At4g35610           <----------DOF2         <---------MYB46(3)                                 <---------At4g35610      xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                <---------MYB46(3)     <---------MYB46(3)            <---------ZAT18                               xxxxxxxxxxxxxxxx>smallRNA(s)    <---------DAG2       --------->ALFIN1                             <---------MYB46(3)     <-----------RAV1(1)           <----------DOF2                             --------->MYB55(2)  <---------WRKY18(1)             <---------DEAR3(1)                            --------->ALFIN1    ----------->HVH21              ------>NtERF2      <--                      --------->MYB52(1)        --------->WRKY38(1)          -------------->OsCBT <-- xxxxxxxxxxxxxxx>smallRNA(fl3) <--------P<-------TEILxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------RAP2.6(2) xxxxxxxxxxxxsmallRNA(fl3)  <---------AtMYB61   --------->WRKY12            <---------LBD16 <--------   tttgttgattctgttcttcagccataacgagtggttgctgaggtacagggttgactgtggttctcctttttctgagttcgcgggctgtgcggttgatgtt  12058600                                                              <---------ATHB12                                                          <---------------AGL15                                                         <---------MYB59                                                         --------->TOE2(3)                                                       ------->TEIL                      <---------ANAC58              <---------REM1(1)                      <---------ANAC58              --------->ALFIN1                   <--------P                      <---------------AtSPL3             --------->GLK1(2)                     --------------->AtSPL8             --------->ARR14(2)              --------->At4g35610                          --------->ANAC58           <---------HSFC1(2)                *TSS  <---------------AtSPL8                 --------->ANAC58           <---------HSFB2a(1)               <---------At4g35610                          <---------ANAC55(2)           --------->HSFC1(2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  --------->ANAC55(2)     ---------->DOF2  <---------ANAC46xxxxxxxxxxxxxxxx>smallRNA(i)          --------->ANAC58 -------YAB1 <---------ARR14(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->ANAC58 -------- -------TOE2(3) <---------YAB1    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <----------ID1  --------->At5g28300 -TOE2(3)  --------->HSFB2a(1) ------>ZmHOX2a(2) <---------AtMYB61 ------------------------>ANAC81 --   atcgttgaaaagaaggttctggttgcctattgatcgagttcgcatacagcagaggtgtacctaaatcaagaagacaacaagaaaaacacagtaagtaact  12058700                                                                             --------->DEAR3(1)                                                                            --------->RAP2.3(1)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                           <---------RAP2.3(1)                                                                           <---------ATERF1(1)                                                                           ------->GAMYB                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                          <---------DEAR3(1)                                                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                        --------->MYB52(1)                                                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    --------->MYB46(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                    <---------MYB52(2)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                       <---------ARR11(3)     --------->ANAC58        --------->YAB1                              <xxxxxxxxxxxxxxxxsmallRNA(i)    --------->ANAC58 <------NtERF2                           --------->ANAC58        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                           --------->ANAC46        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------YAB1                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                        ------>ZmHOX2a(2)--------->TOE1(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <------------CBF<---------ARR11(3) --------->TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----------->GT1--------->ARR11(3)     --------->ARR11(3)<xxxxxxxxxxxxxxxxsmallRNA(i)----------->GT1 ->MYB52(1) ---------->DOF2--------->ANAC58    ----------->GT1--------->ANAC46------>NtERF2 -------->DOF2  <---------ARR11(3)    --------->GLK1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   xxxxxx   gaaaagaaaattgaaaaagaacttgatctaagcaagtctgaaatcttaaatgtaacaaacaaacacccaattggcaacggcgccaaattgataataggtt  12058800                          --------->bZIP60(1)                          <---------bZIP60(1)                        --------->YAB1                        <---------ICU4                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)               <xxxxxxxxxxxxxxxxxxsmallRNA(se3)            ------>ZmHOX2a(1)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           --------->TOE2(3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------YAB1<---------ATHB12         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <---------ANAC58        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                        <---------YAB1        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                         --------->ICU4        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    ----------->HVH21       --------->YAB1--------->WOX13(1)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <xx       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->WOX13(1) <---------ANAC58           <xxx      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      xxxxxxxxxxxxxxxx>smallRNA(i)                    <xxx      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)            xxxxx      <---------ATHB12------>MYB46(1)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            xxxxxx      <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       xxxxxxxxxx     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <xxxxxxxxxx     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       xxxxxxxxxxx    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxxxxxxx    --------->WOX13(1)------>MYB83  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              <xxxxxxxxxxxxx    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    xxxxxxxxxxxxxx   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    --------->MYB59       --------->ALFIN1 <---------ARR11(3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------TOE2(3) <---------ANAC58   <xxxxxxxxxxxxxxxxxxxx  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------TOE1(3) <---------ANAC58 --------->YAB1   <xxxxx xxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <---------ATHB12  <xxxxx   tttagtcaattatcctaaaacaccaatcatgtcattgtagtattttaggttgtcaatccaaatgggtgtgatgcttacaatcaagatgtgatcagaagtc  12058900                     xxxxxxxxxxxxxxxx>smallRNA(s)                                                  --             --------->YAB1                                                                        --           --------->ANAC58                                                                       <xx           --------->ANAC58                                                                       ---           --------->AtLEC2                                                                     -----      --------->ANAC58                                                                         xxxxxx      --------->ANAC58                                                                         <xxxxx   --------->WRKY18(1)xxxxxxxxxxxxxxxx>smallRNA(s)                                             <xxxxx  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                <xxxxxx  <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                xxxxxxx xxxxxxxxxxxxxxsmallRNA(i)                                                                 <<<<<<<<<TAC1 xxxxxxxxxxxxxsmallRNA(s)                                                                  --------->ANAC46 xxxxxxxxxxxxxsmallRNA(i)            --------->ZAT2                                      xxxxxxxxxxxx xxxxxxxxxxx>smallRNA(i)             <---------At4g35610                                <xxxxxxxxxxxx xxxxxxxxxx>smallRNA(i)              <---------ZAT2                                     <xxxxxxxxxxxx xxxxxxxxxxxxx>smallRNA(le3)         --------->At4g35610                              <xxxxxxxxxxxxxx xxxxxxsmallRNA(i)  xxxxxxxxxxxxxxxx>smallRNA(i)                                     ---------->DOF2< xxxxxxxxxxxx>smallRNA(fl3)        <---------HSFB2a(2)                              <xxxxxxxxxxxxxxxx xxxxxxxxxxx>smallRNA(se3)    --------->ALFIN1                                      <xxxxxxxxxxxxxxxx xxxxxxxxxsmallRNA(fl3)     <---------ANAC58  <xxxxxxxxxxxxxxxxsmallRNA(i)         --------->At5g28300 xxxxxxxx>smallRNA(si3)     <---------ANAC46<xxxxxxxxxxxxxxxxsmallRNA(i)           <xxxxxxxxxxxxxxxxx xxxsmallRNA(i2)--------->MYB52(1) --------->HSFB2a(2)--------->AtLEC2            ----------->GT1---- xxxxxxxxxxxsmallRNA(i)  <---------AtMYB61<xxxxxxxxxxxxxxxxsmallRNA(i)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxsmallRNA(fl3) <---------ANAC58------>ZmHOX2a(1)   ----------->GT1 <xxxxxxxxxxxxxxxxxxxx   actaagtcaagccaagcataacaggttttggtgtgttccagcagtcctaagtgaacatgcagaaaacagaaaatcaaacagaaacagtaaaacactcgac  12059000                                                                                                    <                                                                                                    x                                                                                                    x                                                                                                    x                                                                                                    x                                                                                                   xx                                                                                                  xxx                                                                                                  <xx                                                                                                 xxxx                                                                                                <xxxx                                                                                              xxxxxxx                                                                                              xxxxxxx                                                                                              <xxxxxx                                                                                              xxxxxxx                                                                                              <xxxxxx                                                                                             xxxxxxxx                                                                                            xxxxxxxxx                                                                                           xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                         <---------At4g35610                                                                                         <-------GAMYB                                                                                         --------->At4g35610                                                                                        <---------MYB46(3)                                                                                    <xxxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                   xxxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                                                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                  --------->ZAT14xxxx                                                                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                                --------->ZAT18 <xxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <---------ZAT14xxxxxx                                                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                        <------ZmHOX2a(1)      xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                       --------->ANAC58        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxx                                                  ------->GAMYB                xxxxxxxxxxxxxxxxxxxxxx                                                 --------->MYB46(3)            xxxxxxxxxxxxxxxx>smallRNA(s)                                               <xxxxxxxxxxxxxxxxsmallRNA(i)    xxxxxxxxxxxxxxxx>smallRNA(i)        <----------DOF2                        --------->MYB52(1)             xxxxxxxxxxxxxxxxxxxxxxx    <---------At4g35610                      xxxxxxxxxxxxxxxx>smallRNA(i)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---->MYB46(1)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)--------->ZAT14xxxxxx ---->MYB83                               <xxxxxxxxxxxxxxxxsmallRNA(i)        xxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxsmallRNA(i)           <xxxxxxxxxxxxxxxxsmallRNA(s) -------->RAV1(1)                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---->MYB46(3)      --------->HSFB2a(2)  <xxxxxxxxxxxxxxxxsmallRNA(s)        xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxx>smallRNA(s)              <xxxxxxxxxxxxxxxxsmallRNA(i)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxsmallRNA(fl3)    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxsmallRNA(s)            xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxx>smallRNA(s)          <xxxxxxxxxxxxxxxxsmallRNA(s)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxx>smallRNA(s)   <---------HSFB2a(2)  <xxxxxxxxxxxxxxxxsmallRNA(i) <---------ARR14(2)<-----------RAV1(1) xxxxxxxsmallRNA(si3)      <------MYB46(1)<xxxxxxxxxxxxxxxxsmallRNA(s)--------->ARR14(2)xxxxxxxxxxxxx xxxxxxxxxxsmallRNA(se3)   <------MYB83 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxsmallRNA(si3)    <---------AtMYB61<xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxsmallRNA(s)<x ---------ALFIN1    <---------ANAC46<xxxxxxxxxxxxxxxxsmallRNA(s)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxsmallRNA(si3)<---------LBD16<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxsmallRNA(s2)<-----------RAV1(1) <xxxxxxxxxxxxxxxxsmallRNA(i) <xxxxxxxxxxxxxxxxsmallRNA(s)xxxx xxxxsmallRNA(le3) <---------LBD16----------->HVH21    --------->ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ----->AtMYB61  <---------GLK1(1) xxxxxxxxxxxxxxxx>smallRNA(i)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxsmallRNA(se3)--------->GLK1(1) <xxxxxxxxxxxxxxxxsmallRNA(s)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   caacacagctctttgcagagttctgggggaggtcgagtgacaggtcgagtaacagacaggaaatgaaacagggatactcgactgcacagtctgttgccag  12059100  Previous    Next  AGI:  At5g32426.1    Description:  transposable element gene. gypsy-like retrotransposon family (Athila), has a 8.6e-227 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana) Range:  from: 12052863    to: 12058645    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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