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% Restriction to highly conserved TF binding sites (0-100)
 
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                                                   --------->ANAC46
                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                 --------->ZAT6
                                             ------>ZmHOX2a(1)
                                          ------>NtERF2
                                         --------->DEAR3(1)
                                        <------NtERF2
                                        --------->ATERF1(1)
                                       ------>NtERF2
                                       <---------ATERF1(1)
                                       <---------RAP2.3(1)
                                      --------->DEAR3(1)
                                    <---------ATERF1(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                    <-----------HVH21     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                   --------->DEAR3(1)    --------->RAP2.6(2)    --------->REM1(1)
                                 <---------At5g28300 ----------->HVH21<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                               <xxxxxxxxxxxxxxxxsmallRNA(i)         --------->AtMYB61
         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
   <---------DEAR3(2)      xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
   xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------DEAR3(1)<xxxxxxxxxxxxxxxxsmallRNA(i)
------>NtERF2             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
---------->HVH21    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC58     <----------DOF2
-------->DEAR3(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ANAC46 --------->LBD16
--->ANAC46xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)-------->P--------->ANAC58<---------ANAC58
--HVH21 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxsmallRNA(i)<---------ANAC58          <
 
cgacgacggtactcgatttcgccatttcttccttctcaccgtcgcctccttaccactcgaccgcaactcgacctctccgtgcttcatcttcatcttcatt  11958000
                      --------->DEAR3(1)
                   <xxxxxxxxxxxxxxxxsmallRNA(i)
                   --------->ANAC46
                <xxxxxxxxxxxxxxxxsmallRNA(i)                                  xxxxxxxxxxxxxxxxxxxxxx
             --------->HSFB2a(1)                                        <---------ZAT14            <
             <---------HSFC1(2)                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
             <---------At4g35610                                        --------->ZAT14           --
             <---------ZAT2  --------->At4g35610                      --------->ANAC46           ---
             <---------HSFB2a(1)                                      --------->bZIP60(2)        xxx
             --------->HSFC1(2)                               --------->ANAC46xxxxxxxxxxxxxxxxxxxxxx
            <-----------ARR10<---------At4g35610            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---
            <---------ARR14(2)                              <-----------GT1<---------ALFIN1 <xxxxxxx
            --------->ARR14(2)<---------GLK1(2)     xxxxxxxxxxxxxxxx>smallRNA(i)            <xxxxxxx
           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxsmallRNA(i)             xxxxxxxx
           <------NtERF2<---------ARR14(2)       <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)        <---------ARR11(3)
          --------->LBD16    <---------ZAT2      xxxxxxxxxxxxxxxxx>smallRNA(fl3)         <----------
         --------->DEAR3(1)  --------->ZAT2     --------->DEAR3(1)  <---------ALFIN1     --------->ARR11(3)
        <---------LBD16<---------SPL7           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <xxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <---------At5g28300   --------->AtMYB61   <xxxxxxxxxxx
 
tactcgacttcgccggagcttctcgccgttccagcttcgcatactctctcaccgtctctcgtttcactcgaccacttcacacttcgcctcaacatcttcg  11958100
       --------->ANAC58                                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
       --------->ANAC58                              --------->DEAR3(2)
  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->ANAC46    --------->REM1(1)
 <---------HSFC1(2)           <---------At4g35610 ----------->HVH21
 --------->HSFC1(2)        <---------MYB52(1)   <---------LBD16                         xxxxxxxxxxxx
 --------->HSFB2a(1)      <-----------HVH21    --------->MYB52(1)                 xxxxxxxxxxxxxxxxxx
x>smallRNA(si3)  <---------ANAC58    --------->ZAT14--------->ARR14(2)         xxxxxxxxxxxxxxxxxxxxx
------NtERF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ANAC46
------->LBD16xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------SPL7               <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
------>DEAR3(1)  <---------ANAC58   xxxxxxxxxxxxxxxx>smallRNA(i)              --------->ANAC46
xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------MYB52(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
>smallRNA(fl3)<xxxxxxxxxxxxxxxxsmallRNA(i)    --------->AtMYB61               <-----------GT1
------LBD16 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->MYB46(3)          --------->MYB46(3)-----
xxxxxxxxxsmallRNA(i)      <-----------TGA1    <---------ALFIN1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <x
xxxxxxxxxxxxxxxxsmallRNA(se3) --------->At4g35610--------->DEAR3(1)xxxxxxxxxxxxxxxx>smallRNA(i)-----
xxxxxxxx>smallRNA(i) <---------ANAC58<---------ZAT14--------->SPL7<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
-ARR10 --------->ANAC46  --------->ANAC55(2) --------->MYB46(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
xxxxxxxxsmallRNA(i2) <---------ANAC58<---------ZAT18<---------ARR14(2)   <---------MYB52(2)    -----
xxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<x
 
ccggagtttctcgccattgtccgtgcttccgtcatctccgttcactcgaccaccggaccggcttcaccatctctcaactatccaccattcactcgacctc  11958200
                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                                   --------->DEAR3(1)
                                                 ------>NtERF2
                                                --------->DEAR3(1)
                                                <---------ALFIN1
                                             --------->RAP2.6(2)
                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
          --------->RAP2.3(3)                --------->ANAC46
          --------->DEAR3(1)                 --------->ANAC58
          --------->RAP2.3(2)                --------->ANAC58
         --------->ATERF1(1)                 --------->DEAR3(1)
         --------->RAP2.3(1)                 ------->GAMYB
        <---------RAP2.3(1)                 <------------AtMYB77
        <---------ATERF1(1)                 --------->MYB46(3)                        <-----------GT1
        ------>NtERF2                    ---------->DOF2                --------->ARR14(2)  xxxxxxxx
      <---------ZAT18                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <-----------HVH21
   <---------At5g28300 <----------DOF2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxx>smallRNA(s)
xxxxxxxxxxx>smallRNA(fl3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)----------->HVH21  ----
xxxxx>smallRNA(fl3)---------->ID1      <xxxxxxxxxxxxxxxxsmallRNA(i)     --------->ZAT14 --------->ANAC46
xx>smallRNA(fl3)   <---------CCA1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  xxxxxxxxxxxxxxxx>smallRNA(i)
---->ANAC46    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<------NtERF2        xxxxxxxxxxxxxxxx>smallRNA(i)x
xxxxxxxxxxxxxxxsmallRNA(i)         xxxxxxxxxxxxxxxx>smallRNA(i)        --------->DOF5.7(2)----------
---->ANAC58   xxxxxxxxxxxxxxxx>smallRNA(i)  --------->DEAR3(2)         <---------MYB52(1)xxxxxxxxxxx
---->ANAC58------>NtERF2--------->ZAT14------>ZmHOX2a(1)         xxxxxxxxxxxxxxxx>smallRNA(i)   ----
xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------At4g35610            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
 
gccattcactgcgcctccattcgtctctttactcgactgctcctcaaaccgccaccgtcttctctaaattcgccgtttactcgaccgtttcactcgaccg  11958300
                                                                                                  xx
                                                                                                  xx
                <---------ANAC58                                                    <---------YAB1xx
   <---------WRKY18(1)                 <------------CBF                            xxxxxxxxxxxxxxxxx
   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <------MYB83                 ------------>CBF   ---
  ----------->HVH21                  --------->ARR11(3)           --------------->AGL15         <xxx
xxxxxxxx>smallRNA(i)    <---------AHL20(2)       <------MYB46(1)  <---------------AGL15      -------
----->TOE2(1)   <---------ANAC58    --------->YAB1                <----------DOF2  xxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)--------->MYB52(1)        <-------TEIL --------->LBD16     <------
->HVH21     <---------ANAC46     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------LBD16  <xxxxxxxxxx
xxxxxxxxxxxx>smallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------LBD16 *TSS <<<<<<<<
----->TOE1(1)   --------->ALFIN1<---------MYB52(2)         <-----------GT1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
 
cgtacttgactggtttagtgtgtgtgtttatttgaactaacatattgatatttggttttgagttacattctttttcagggaatcaatatgagtaactaca  11958400
       ------>ZmHOX2a(1)
    --------->HSFB2a(1)
   <---------ARR14(2)                             <---------WRKY12
   --------->ARR14(2)                            <<<<<<<<<<WRKY26
   --------->GLK1(2)                             <<<<<<<<<<WRKY43
   <---------ARR11(1)                            --------->WRKY18(1)
  <---------ARR14(1)                       <xxxxxxxxxxxxxxxxsmallRNA(i)
<---------ANAC46                          ------->TEIL
<---------ANAC58                         <xxxxxxxxxxxxxxxxsmallRNA(i)
<---------ANAC58                         xxxxxxxxxxxxxxxxxx>smallRNA(si3)                          <
xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------At4g35610                                      xxxxxx
xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->At4g35610                                 xxxxxxxxxxx
xxxxxxxxxxxxxx>smallRNA(i)      xxxxxxxxxxxxxxxx>smallRNA(i)                          --------->At4g35610
xxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxx>smallRNA(i)<---------WRKY38(1)              <xxxxxxxxxxxxxxxx
------>ALFIN1    <---------ANAC46   ------->TEIL <<<<<<<<<<WRKY6                 <---------YAB1xxxxx
xxxxxxxxxxxxxsmallRNA(s)       xxxxxxxxxxxxxxxx>smallRNA(s)                   xxxxxxxxxxxxxxxxxxxxxx
-->ZAT14        <---------LBD16xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <xxxxxxxxxxxxxxxxsmallRNA(i)
xxxx>smallRNA(fl3)--------->LBD16 ---------->DOF2<<<<<<<<<<WRKY11          <xxxxxxxxxxxxxxxxsmallRNA(i)
---ZAT14   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <<<<<<<<<<WRKY38         ------->GAMYBxxxxxxxxxxxxx
xxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
<<<<<<<<<LFY  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------WRKY45     ----------->RAV1(1) xxxxxxxxx
 
gtggcgaatcctccatggatgcggattacaacgtcgatgaagctgaatcttggtcaactagaccagggagagagcaacaggcttatgagagcttcagagc  11958500
       ------->GAMYB
       <xxxxxxxxxxxxxxxxsmallRNA(i)
      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
    ------>MYB46(1)
    --------->MYB52(1)
    ------>MYB83
  <---------MYB55(2)
  <xxxxxxxxxxxxxxxxsmallRNA(i)
  --------->MYB46(3)
 --------->ANAC58                                                                                  x
 xxxxxxxxxxxxxxxx>smallRNA(i)       --------->At4g35610                    --------->CCA1(2)  ------
 --------->ANAC58                   --------->ZAT2                        --------->ARR14(2)  <-----
xxxxxxxxxxxxxxxxsmallRNA(i)         <---------ZAT2                    <---------At4g35610     ------
xxxxxxxxxx>smallRNA(i)              <---------At4g35610          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
xxxxx>smallRNA(i)    --------->ANAC58                ---------->DOF2  --------->At4g35610     <-----
xxxxxxsmallRNA(se3)  --------->ANAC58         <---------ANAC58  --------->WRKY12              ------
xxxxxxxxxxx>smallRNA(i)     ---------->DOF2   <---------ANAC58  ----------->HVH21             <-----
x>smallRNA(se3)      --------->ANAC46xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ARR14(2)--------
xxxxxxxxxx>smallRNA(si3)  <---------ATHB12 <---------WOX13(1)   --------->WRKY38(1)   ------>ZmHOX2a(2)
xxxxxxx>smallRNA(i)  <xxxxxxxxxxxxxxxxsmallRNA(i)   <------ZmHOX2a(1)----------->RAV1(1)    <xxxxxxx
 
cgagacccaacgctcagtagctcgacgcaatgaaaggagagctgagattgctagaggaaagagagcgatgaccagcagatatgagttgatcgacgaagat  11958600
    xxxxxxxxxxxxxxxx>smallRNA(i)
    <xxxxxxxxxxxxxxxxsmallRNA(i)
   xxxxxxxxxxxxxxxx>smallRNA(s)
   xxxxxxxxxxxxxxxx>smallRNA(i)
  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
 <---------bZIP60(2)                                                                               x
 --------->O2                                                                                   xxxx
 <---------ANAC46                                                                              xxxxx
 <---------O2                                                                                  xxxxx
xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 --------->ANAC58                           ------
--->ARR11(3)           <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                      <-------TEIL    <-----
----ARR11(3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
--->ARR14(3)       <xxxxxxxxxxxxxxxxsmallRNA(i)    --------->ANAC58  --------->ALFIN1         <-----
----ARR14(2)       <-----------HVH21      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <----------DOF2
--->ARR14(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------DAG2
----ARR14(3)  ----------->RAV1(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <------ZmHOX2a(1)   ------
--->ARR10    ------->TEIL   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
xxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(i)         <---------At5g28300  xxxxxxxxxxxxxx
 
attgacgtcgagtatgagcctgagtcatggcacagagaaacaaaactgttgaacaagcctgatgaagttacagtggaggagtacatcagacttttcgagc  11958700
                                                                                   xxxxxxxxxxxxxxxxx
                                                                                <xxxxxxxxxxxxxxxxxxx
                                                                               <xxxxxxxxxxxxxxxxxxxx
                                                                               <---------HSFC1(1)
                                                                               <---------HSFB2a(2)
                                                                               --------->HSFB2a(2)
                                                                             xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                                             <xxxxxxxxxxxxxxxxxxxxxx
                                                                            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                                                     <xxxxxxxxxxxxxxxxsmallRNA(i)
                                                                  ---------->DOF2<xxxxxxxxxxxxxxxxxx
                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           --------->SPL7<xxxxxxxxxxxxxxxxxxx
                  <---------SPL7                                  <-------TEIL<xxxxxxxxxxxxxxxxxxxxx
                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           <---------SPL7xxxxxxxxxxxxxxxxxxxxxx
              <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           <---------------AtSPL3       <xxxxxxxx
       --------->HSFB2a(2)    --------->ANAC55(2)             --------------->AtSPL3 xxxxxxxxxxxxxxx
       <---------HSFB2a(2)<-----------HVH21               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         --------->ZAT2   <---------------AtSPL8xxxxxxxxxxxxxxxx
xxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxsmallRNA(i)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxx
xxxxxxxxxxxxxxxx>smallRNA(si3)<---------ANAC55(2)    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xxxxxxxxx
xxxxxxxxxxxxxxxxxx>smallRNA(fl3)             <---------ZAT2   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
--->At4g35610 <---------TOE2(1)    --------->GLK1(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxx
----ZAT2<---------LBD16 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<------ZmHOX2a(1)xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
----At4g35610 <---------TOE1(1)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ZAT18xxxxxxxxxxxxxxxx
--->ZAT2--------->LBD16----------->RAV1(2)  xxxxxxxxxxxxxxxx>smallRNA(i) --------->ICU4 <xxxxxxxxxxx
xxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
 
tgaacgacttctggggaacgaggtacccctgttacgagactctagcccagcttgggctactggaggacgtacagcacttattcgagaagtgccatcttga  11958800
            --------------->AtSPL3
          -------->P
        xxxxxxxxxxxxxxxx>smallRNA(i)
       <---------ANAC58
       <---------ANAC58
    xxxxxxxxxxxxxxxx>smallRNA(i)
    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                   xxxxxxxxx
   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                  --------->At4g35610
xxxxxx>smallRNA(si3)                                                                      <---------At4g35610
xxsmallRNA(fl3)  --------->ANAC46                                                       <-----------RAV1(2)
xsmallRNA(i2)--------->ANAC46                                                          <---------At4g35610
xsmallRNA(fl3)  ------->TEIL                                                           --------->ZAT14
xxsmallRNA(si3) <-------TEIL                                                           <---------ZAT14
xxxsmallRNA(fl3)--------->SPL7                                                       <xxxxxxxxxxxxxx
xsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                             <xxxxxxxxxxxxxxxxxx
>smallRNA(si3)<---------SPL7                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
xxxxxxxxxxxxxxxsmallRNA(i2)                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
xxxxxxxx>smallRNA(fl3)                                                  xxxxxxxxxxxxxxxx>smallRNA(i)
xxxxxxxxxxxxxsmallRNA(i2)                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
xxxx>smallRNA(se3)                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxsmallRNA(i2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
xxxxxxxsmallRNA(i)  <xxxxxxxxxxxxxxxxsmallRNA(i)     <---------ALFIN1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
xxxxxxx>smallRNA(fl3)           ----------->GT1     --------->ZAT14  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
xxxxxxxxxsmallRNA(fl3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ALFIN1xxxxxxxxxxxxxxxx>smallRNA(i)
 
gacgctgatgtcttacccgtacgtcgcttacaagaaggaaacaatagagtttctctccactctgcaagtggagttgtatcagggacttactgcagatgaa  11958900
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AGI:  At5g32306.1   
Description:  transposable element gene. Athila retroelement ORF2 -related, contains similarity to gi:806534
Range:  from: 11958388    to: 11960283    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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