Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              ------>NtERF2                                                           --------->DEAR3(1)                                                          --------->ATERF1(1)                                               ------>NtERF2--------->LBD16                                    <---------MYB46(3)    <---------LBD16                                    <------MYB46(1)      <---------RAP2.3(1)                        <                                    ----------->GT1      ------>NtERF2                              -                                    <------MYB83        <---------DEAR3(1)                        <--                                   <---------DEAR3(1)   --------->ETT(2)                          ---                                   <---------AtMYB61  <-----------HVH21                           ---                                 <---------ANAC58    <-----------RAV1(1)                       ------            <---------ANAC46     <---------ANAC58   ------->MYC3                           --------->WRKY38(1)          --------->MYB52(1)     <---------ANAC46   <-------MYC3                           ----------     --------->ETT(2)           <---------MYB46(3) --------->TGA1a                        <---------MYB52(1)     <---------ETT(2)        <---------ANAC58 --------->ANAC46                           --------->At4g35610  <---------MYB46(3)         <---------ANAC46--------->At4g35610                         <---------At4g35610 ---------At4g35610          <---------ANAC58<---------At4g35610                         --------->LBD16 -------->At4g35610 --------->At4g35610    ---------->CDC5<------NtERF2                <---------LBD16 -------DEAR3(1)    <---------At4g35610    ==================MYC_MYB            <---------ANAC58  --- -------RAP2.6(2)   <xxxxxxxxxxxxxxxxsmallRNA(i)   --------->O2                 <---------ANAC46 <--- ----->RAP2.6(3)   --------->ALFIN1--------->ALFIN1<---------O2   <------ZmHOX2a(1)  --------->GLK1(2) ------ORA47(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->ALFIN1           <---------ANAC58-----   acggctgtcgactagcgggatgtgctgagtgtcttgggtggtgactcagcgccatgtgtcgccgggcaggatgcgattagtggcgagactccggtgactc  11133100       <-----------HVH21                                             --------->RAP2.6(2)      --------->ALFIN1                                            ------>NtERF2    <---------ANAC58                  <---------DEAR3(1)        --------->ATERF1(1)                 -    <---------ANAC58             <---------MYB52(1)             --------->RAP2.6(3)                 <    <---------ANAC46             --------->ALFIN1             ----------->HVH21                   ---   <---------MYB46(3)           --------->LBD16             <---------MYB46(3)                 ------ ---------ZAT2                 <---------ANAC46          <------MYB46(1)                       <----- -------->ZAT2         --------->REM1(2)<------NtERF2    <------MYB83----------->GT1       --------->TOE1(3) -------TGA1a       <---------ANAC58 --------->ATERF1(1)--------->ALFIN1                   --------->TOE2(3) ------>TGA1a       <---------ANAC46<---------PCF2      <---------AtMYB61              --------->MYB46(3) ------>ANAC58      <---------ANAC58<-----------HVH21 <---------ANAC58          <XXXXXXXXXXXXXXXXXXXXMIR395B/C/F ----->HVH21    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ANAC58 ----------->HVH21   <---------DAG2 ->HVH21<------NtERF2  <---------ARR14(2)        --------->ALFIN1<---------RAP2.6(2)  --------->ANAC46 ------>ANAC58 ----------->RAV1(1)<---------MYB46(3)  <---------ANAC46--------->At5g28300------->TEIL ------LBD16--------->PCF2     <---------ANAC58  <---------ANAC58--------->ATERF1(2)  --------->ANAC58 ---->MYB52(1) <---------ALFIN1<---------ANAC58  <---------ANAC58<---------ATERF1(2)  --------->ANAC58   acggctgggtgtcgctcccacagcgtgtccagtccgtgggtcgcctatcgagcgtggcttggtggtgacggccgtaacaagtctccccaagcaccttagc  11133200           --------->LBD16          --------->ANAC46          --------->LBD16         --------->LBD16         <---------HSFB2a(2)         --------->HSFB2a(2)        <---------LBD16   ------>MYB83   ------>MYB46(1)                                   <---------ALFIN1 ------->GAMYB                                       --------->REM1(1) -------->MYB46(3)                         ------>ZmHOX2a(1) ------------MYB.PH3(2)                   --------->TOE2(3)                      <---------HSFB2a(1) ------>MYB52(1)                          --------->TOE1(3)            ------>MYB46(1) --->At4g35610                       ------>ZmHOX2a(1)                 ------>MYB83    ------>NtERF2 ----At4g35610      --------->AHL20(2)   ------>ZmHOX2a(2)     --------->YAB1   ------->TEIL   taaccaacttccccgaaaacctataaatagccctcattcctgatccttagaacttacacctcgaataaaaacccactataagtaccttcggccactagta  11133300                       <---------------AGL15                       <---------MYB59                                  --------->LBD16                       --------------->AGL15                           ------->GAMYB            <----                      ==============================================================================MADS_MADS                      <-----------------AG                            --------->MYB46(3)        <----                      ----------------->AGL2                          <------------AtMYB77     ------                      ----------------->AGL1                        --------->ARR14(2)         ------                 ---------->DOF2       <---------MYB52(1)           <-----------GT1 --------------->AGL15             --------->LBD16           <--------P            <----------DOF2        <---------------AGL15            --------->ANAC46          <---------MYB52(1)    <---------ANAC46       --------->ANAC55(2)           --------->TOE1(2)         <---------DEAR3(2)     <---------ANAC58       <---------ANAC55(2)           <---------LBD16           <------MYB83           <---------ANAC58  <---------------AtSPL8         <---------ARR14(2)          <------MYB46(1)   --------->MYB52(2)     --------------->AtSPL8         --------->ARR14(2)         --------->MYB59 --------->TOE2(3)<---------At5g28300       ------     <------ZmHOX2a(1)<-----------------AGL1    <---------ETT(1)    <---------ARR14(2)     <---------ZAT6   aaccagaggagaacccgcgaaaagacccaatttggaagtcggtaagttttccgaccttagttgcttttagtaaccgcagattagtacttaatagagttag  11133400                                                                             --------->LBD16                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                            <---------ANAC46                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                    ----------->ARR10      <-------TEIL                                                    --------->MYB111(1)  <---------ARR14(2)                                                    --------->MYB59<---------HSFB2a(2)     <---------WOX13(1)                             --------->MYB111(2)  --------->ARR14(2)    <---------ANAC58                                --------->MYB46(2)  =================HOX2a_HOX2a    <---------ANAC58                                <---------AtMYB61   <------ZmHOX2a(1) <---------ANAC46                                  <--------P   <---------ARR14(2) --MYB83                                <---------ARR14(2)      --------->ARR14(2) --MYB46(1)                             --------->ARR14(2)     <---------MYB52(1) <------ZmHOX2a(2) --->MYB111(1)                       <---------ATHB12<------MYB83  --------->HSFB2a(2) --->MYB46(2)    ------->GAMYB     --------->MYB52(1)<------MYB46(1)--------->LBD16 --->MYB59    --------->MYB52(1) --------->MYB46(3)<---------MYB55(1)--------->LBD16             ----   gttgtggattgctagataaccgagtaagagaaggaaccaatggattcgagggggtaggtatggccgtttcccgaggatgcgtggatcaccagtaagtctc  11133500                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                             <---------ICU4                          <------------CBF                                             --------->ATHB51                       -------->ATHB1                                            <---------YAB1                          -------->HAHB4                                          --------->YAB1                            <---------ICU4                                      <---------AHL20(2)                            --------->ATHB51                                 --------->AHL20(2)                                 <---------AHL20(2)                                 <---------AHL20(2)          ----------->GT1        --------->ATHB12                     <---------AtMYB61<-----------GT1      <--------P              --------->ICU4               <-------MYC4      <---------AHL20(1)      ----------->GT1         <---------ICU4               <-------MYC3      --------->AHL20(1)    <------ZmHOX2a(1)         --------->YAB1               <-------MYC2     <---------AHL20(2)<---------ANAC58              <---------YAB1               ------->MYC3     --------->AHL20(2)<---------ANAC58              --------->ICU4       <---------REM1(1)    --------->AHL20(2) <---------WOX13(1)   --------->YAB1 <---------ATHB51 ------->HVH21 ------->MYC2 <---------AHL20(2)<------------CBF     <---------ATHB12<---------YAB1<---   ggacatgtgaagtagcacatgtttaggtgtttaattttatttacttataattgcctaggaggttagtaaatcatactaagtgataattattgtgtgatgc  11133600                                                                                                   <-                                                                                              -------                                   <---------ZAT6                                           <--------                                 ----------->GT1                                            <--------              <---------WOX13(1) <---------ANAC46                                          --------->ATHB12            --------->ATHB12   --------->ZAT14              ----------->HVH21          <---------MYB46(3)           <---------YAB1      --------->ZAT18     --------->ANAC58                  <---------ANAC58      <-----------RAV1(1) ---------->DOF2          --------->ANAC58       <------------CBF<---------YAB1   <----------DOF2     --------->TOE2(3)<---------TOE2(3)<---------ARR11(3)          <---------ANAC58 ---------CBF<------------CBF  <---------ZAT14 <---------At4g35610 <------------CBF  <---------ANAC46   attgtcttttgttgtgattgcataatgttaaagtgtagtataaacgttgtgctacccaagttctgacaacattgtcgattgagtcttgcttgttgattgt  11133700                <---------ANAC55(2)                <---------ANAC58                <------MYB83                <---------ANAC58                <---------ANAC55(1)                --------->ANAC55(2)                <---------ANAC46                                  ----------->GT1                <------MYB46(1)                         --------->LBD16               --------->MYB111(1)                     --------->LBD16      <------MYB83--------->ALFIN1                    <---------LBD16      <------MYB46(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <------------CBF    --------------->AGL15<---------MYB52(1)          ------>ZmHOX2a(2)   <---------ANAC58    <---------YAB1               <------ZmHOX2a(2)                          <-----   <---------ANAC58   ----------------->AGL1       --------->ARR14(2)                          <-----   <---------ANAC46   <-----------------AGL1       --------->ARR11(3)                --------->ICU4 -----------CBF--------->MYB46(2)                  <---------ARR14(2)              --------->YAB1 ---->GT1      --------->MYB59                     <---------ARR11(3)              <---------ICU4 ----CBF       --------->MYB111(2)                --------->GLK1(1)        <---------TOE1(2)  <------ -ANAC46     <---------MYB52(1)                   <---------GLK1(1)    --------->ZAT6<---------YAB1   aaattgcttggtatagttaggtgttccgatagcggtataggtgaaaccctagagatcccggtctaattgagtaatactaggttactcatgatgctacctt  11133800                                             --------->ATHB12                                             <---------ICU4                                             <--------HAHB4                                            <---------YAB1                   --------->LBD16          --------->ICU4 <---------ZAT2                  <---------LBD16          <---------ARR11(3)    --------->ARR11(3)                 -                  <---------ANAC46         --------->ARR11(3)  ----------->ARR10                   <-       --------->ANAC58               <------NtERF2        --------->At4g35610               <-------       --------->ANAC58 --------->GLK1(2) --------->YAB1   --------->ZAT2               --------->YAB1       --------->ANAC46--------->GLK1(1) --------->ICU4  ------->GAMYB   <---------At4g35610 --------       --------->ANAC55(1)<-----------------AGL3        --------->MYB46(3)         --------->ARR14(2) -----DOF2     ---------->CDC5       ------>NtERF2     ------>MYB46(1)<---------At5g28300   <-------- ----DAG2    --------->TOE1(3)   --------->ANAC46      -------->P<---------ARR11(3)<---------ARR14(2) ---DAG2     --------->TOE2(3) --------->MYB52(1)      ------>MYB83  <-----------GT1   <---------ZAT6   tttgtttacacgaaaccttagcggggaatctataaacggcgcgatgatcattaggccaaccagcttagattttacagctcttgcaaatactgataatgtt  11133900                                   ------>NtERF2                                  --------->DEAR3(1)                                 --------->MYB46(3)                                 --------->ATERF1(1)                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                                <---------ATERF1(1)                              <------ZmHOX2a(1)                            <---------TOE2(3)                 --------->YAB1<---------ARR14(2)              =========================HOX2a_HOX2a      <---------YAB1   <---------AHL20(2)                                             --------->ATHB12 <---------AHL20(2)    --------->AHL20(2)                                            <---------YAB1 -------->AHL20(2)    --------->AHL20(2)                                             <---------ATHB12 --------YAB1 ==========================HOX2a_HOX2a                                  --------->ICU4 --YAB1       ------>ZmHOX2a(1)--------->ARR14(2)                        --------->AHL20(2)         - ->ICU4  <---------GLK1(1) <---------ICU4               <---------DOF5.7(2)  <---------AHL20(2) <---- -TOE2(3)--------->GLK1(1) --------->YAB1  <-----------GT1               <---------AHL20(2)<---------   tattatatatgatttcctatgaaaattaataaggatccgccctatatacgagttttggtaacgttttattcgtatatatataatgtaatgatttaaccct  11134000  Previous    Next  AGI:  At5g29070.1    Description:  similar to nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G06479.1) Range:  from: 11132179    to: 11133520    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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