Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                    <---------GLK1(1)                                                                   <---------ARR11(3)                                          ---------->DOF2       --------->YAB1   --------->ANAC58 ------->ANAC46                  --------->ANAC46         --------->ANAC46     ---------->DOF2 ----->ANAC46                  --------->ANAC58      <<<<<<<<<MYB98--------->ARR11(3)       <-------- ----->ANAC58                  --------->ANAC46    ----------->GT1 <---------AGP1--------->ANAC58 ----->ANAC58                  --------->ANAC58   --------->AHL20(1)--------->GLK1(1)   <---------GLK1(1)   cacaaaattgcgacgcttaagttagccaaaaacacacaaaattgcaaagaaatatgttaaacacaataagatctctcatgcgaaagctagaaatcactgt  10864500                                --------->CCA1(2)                               --------->ARR11(1)                               <---------ARR14(2)                                    <----------ID1                               --------->ARR14(2)                       <---------DEAR3(1)               <---------AHL20(2)                                    <---------GLK1(2)               --------->AHL20(2)                             <-------TEIL <---------ANAC46    ------>ZmHOX2a(1) ----------->GT1                      <------ZmHOX2a(1)        <----------------  --------->YAB1      <---------------AGL15         >>>>>>>>>WRKY18  --------->ARR14(2) -At5g28300<---------YAB1      --------->ARR11(3)  ----------->HVH21 <---------ARR14(2)   ggaatcctaatttgtgataaatttctgtaaaaagatttgggatttagagagttttgacagaggatgcattggattcggcgtaagttagcgaaaaacacaa  10864600                                              ------>ZmHOX2a(2)                                             --------->GLK1(1)         --------->TOE1(2)                                             =============================HOX2a_HOX2a                                             <------ZmHOX2a(2)       --------->GLK1(2)       <---------ANAC58                      <---------GLK1(1)       --------->ARR14(2)       <---------ANAC58                     --------->ARR14(2)       <---------ARR14(2)       ----------->GT1                      <-----------ARR10       <---------GLK1(2)       <---------ANAC46                     <---------ARR14(2)     <------ZmHOX2a(1)  <---------ANAC58                          <---------AGP1 <---------YAB1  <---------ANAC58           <---------GLK1(2)============================HOX2a_HOX2a -----WRI1                --------->ANAC46 <---------CCA1(2)    <---------LBD16   aattgcgaggcgtaaattagccaaaaacacagaattgcgaaattcggatctcagagaagttttgattcaggaatctgggattttaaaaccctagattagt  10864700                                  --------->HSFB2a(1)                                  <------MYB46(1)                                  <------MYB83                    <----------DOF2                   ------>ZmHOX2a(2)                   ===================HOX2a_HOX2a                 <---------ARR11(3)                 --------->ARR11(3)                 --------->ARR14(2)                 <---------AGP1===============================HOX2a_HOX2a                 <---------ARR14(2)                <---------CCA1(2) <---------HSFB2a(1)                                       <------ZmHOX2a(1)           --------->ATHB12    <------ZmHOX2a(1)                 ---------->DOF2          <---------TOE2(3)        ==================HOX2a_HOX2a                          --------->ARR11(3)     --------->CCA1(2)        <------ZmHOX2a(1)----------->RAV1(2)           <------ZmHOX2a(2)      <-----------HVH21   <--   ggaattgtaaggaagattggatcttttacctgaggaaggttttggagagttggagagatcgaagagataatgcagagaagagtcagagatttgaggaaga  10864800                                                                        <---------MYB52(1)                                                                  <---------ALFIN1                                                                  --------->AtMYB61     <---------ZAT14                                           --------->REM1(1)  ----------->GT1                                            ----------->RAV1(1)             ------>ZmHOX2a(1) ----ZmHOX2a(1) <---------AHL20(2)            <------ZmHOX2a(1)<---------ALFIN1           -----------   ggaagagtaaacttgtatttatagagagagaacagaagaagatgaagaggaagatggagagagcaacaccactcgttgttttagttttccaactcctatt  10864900                                                             <---------AHL20(2)                                       <---------AHL20(2)    --------->AHL20(2)                        --------->AHL20(2)                  --------->AHL20(2)                        <---------AHL20(2)               <---------AHL20(2)                       <---------AHL20(2)                --------->AHL20(1)                       <---------AHL20(1)               --------->AHL20(2)                          -                       --------->AHL20(2)    --------->TOE2(2)                                      <                       --------->AHL20(1)    --------->TOE1(2)                                   <---       *TSS        <---------AHL20(2)  --------->AHL20(2)--------->AHL20(2)            <---------HSFB2a(2) ---->AGL15<----------DOF2  <---------AHL20(2)------>ZmHOX2a(1)       <----------DOF2  --------->HSFB2a(2)   ggtatttgtgcctctttctgttaaatttattttataactaataaaatccttcgaaaaaaaaaattaatacttcttttgtagagagttttttagaaaatag  10865000                        --------->AHL20(2)            --------->ARR11(3)<------MYB46(1)            <---------ARR11(3)<------MYB83      <---------HSFB2a(2)    --------->MYB59                         <---------MYB46(3)      --------->HSFB2a(2)    <---------TOE2(3)            <---------YAB1   <---------AHL20(2)   <---------AHL20(2)               <---------AHL20(2)  <-----------TBP       <---------YAB1           <---------YAB1  <---------------AGL15  --------->AHL20(2) <----------DOF2      <---------AHL20(2)     --------------->AGL15 -------->ARR11(3)   <---------DAG2       --------->AHL20(2)  <-----------GT1           ----------->GT1 ---------ARR11(3)<-----------GT1     --------->ATHB12   <---------AHL20(1)  --------->YAB1 ---ZmHOX2a(1)--------->AHL20(2)     <---------YAB1    <---------AHL20(2)    ----------->GT1   ------   gagattttatagaagatttattactttttattaggtttgatgatttatattatgcatattatttttactatttgttgaatcgtatttagatagataataa  10865100                                                              --------->YAB1                                                    --------->AtMYB61                                                    <---------MYB46(2)                                                <---------ZAT14                                                --------->ZAT14                                                <---------ZAT18                                            <-----------RAV1(1)                                         --------->ATHB12   --------->AHL20(2)                    <--                                       <----------DOF2------>MYB83   --------->AHL20(2)           ---                                    <-----------GT1 --------->MYB46(3)       <-----------GT1      ---                                    <---------AHL20(2)------>MYB46(1)<---------AHL20(2)           <--                                 --------->ARR11(3) <---------MYB111(1)  <---------AHL20(2)    <-----                                 --------->AHL20(1) <---------MYB111(2) <---------AHL20(2)     ------                                 <---------AHL20(1)--------->ANAC46 <---------AHL20(2)       <-------                                 <---------ARR11(3)--------->ANAC58 --------->AHL20(2)    --------->AHL20(1)                                <---------AHL20(2) --------->ANAC58 <---------AHL20(1)    <---------AHL20(1) --->YAB1   ----------->GT1 --------->AHL20(2)  --------->ZAT18  <---------ICU4           <---------ARR11(3)   gaaatgttttagtttagaaaaaaaaaaaaactaaatattttctttattggtgcaccaaacaatttcataatttttttattttctagcttcaatatataaa  10865200                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                             --------->AHL20(2)        <---------ARR14(2)                                                            <---------AHL20(1)         --------->ARR14(2)          --------->YAB1                                    --------->AHL20(1)      --------->ANAC46         <---------AHL20(2)          --------->ATHB12       <---------AHL20(2)     <---------TOE2(3)   ----------->GT1                   <---------AHL20(2)  --------->AHL20(1)       --------->MYB52(1) -------AHL20(1)                    --------->AHL20(2)   <---------AHL20(2)       <-----------GT1 ------>AHL20(1)                <---------ARR11(3)       <---------AHL20(1)     <---------YAB1      < ------>ARR11(3)       ------->TEIL <---------AHL20(2)   --------->AHL20(2)----------->GT1 <--------- -------ARR11(3)--------->AHL20(2) <---------AHL20(2) --------->YAB1     <---------ANAC55(1)<-------- ----AHL20(2)<---------ICU4     --------->AHL20(2)   <---------AHL20(2)  <---------ANAC58  <---------RAP2.6(3) --->AHL20(2)<---------AHL20(2) --------->AHL20(1)  --------->AHL20(2)   <---------ANAC58  <--------- --AHL20(2) --------->AHL20(2)  <---------AHL20(1)  <---------AHL20(2)   <---------ANAC46<-----------   aatatttgtaaataataaatatatgtatattctatatattaattgagaagtttttttaataaaatatttatattggcgtgttattaacgaaaccgtcatg  10865300                    <--------ATHB1                    <---------ICU4                    -------->HAHB4                --------->ARR11(3)                    --------->ATHB51              <---------GLK1(2) ---------YAB1     --------->AHL20(2)        <-----------GT1 --TGA1            <---------AHL20(2)       <---------YAB1                                    ------- -MYB52(1)         <---------ATHB51       <---------ICU4       <---------ZAT6     <---------AHL20(2) --HVH21       --------->AHL20(2)       <---------GLK1(2)--------->WOX13(1)      --------->AHL20(2) -AtMYB77      <---------AHL20(2) <-----------GT1 <---------ARR11(3)          --------->AHL20(2) ----   ttgtgattctaatccatttaaataattgtccaaattttactagattattacagatttttcaattagtcttattcatacatatatataatacacattaaaa  10865400  Previous    Next  AGI:  At5g28840.1    Description:  GME (GDP-D-MANNOSE 3',5'-EPIMERASE); GDP-mannose 3,5-epimerase/ NAD binding / catalytic. Identical to GDP-mannose 3,5-epimerase [Arabidopsis Thaliana] (GB:Q93VR3); similar to UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2), catalytic/ dTDP-glucose 4,6-dehydratase [Arabidopsis thaliana] (TAIR:AT3G62830.1); similar to UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2) [Arabidopsis thaliana] (TAIR:AT3G62830.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO43062.1); similar to unknown [Picea sitchensis] (GB:ABK24746.1); similar to GDP-D-mannose-3',5'-epimerase [Malpighia glabra] (GB:ABB53472.1); contains InterPro domain NAD-dependent epimerase/ Range:  from: 10862177    to: 10864907    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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