Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------ANAC46        --------->MYB52(2)                                ---------->ID1        ----------->GT1                                <---------DAG2      <--------P                                       <----------DOF2      <---------MYB52(1)                            <-----------GT1    <---------MYB46(3)                         <---------ANAC58   <---------ATHB12                            <---------ANAC46        <-------GAMYB                < ------>ANAC46                                 <---------ANAC58       <-----------RAV1(1)<-------TEIL -----GT1        <---------YAB1           <-----------RAV1(1)    <---------At4g35610<xxxxxxxxxxxxxxxx   gctcaatggttagttattttttatagtctccaagttgcaatctattgttgtgtgttacttttcgtttagatgctgttgttcttgacttatgttcatgtag  10831400                         --------->ALFIN1                         <---------ICU4                       --------->ALFIN1                    ----------->GT1   --------->ANAC58                     <---------ANAC58                     --------->ICU4     --------->ANAC58                  <---------LBD16                    <------MYB83 --------->YAB1                 <-----------RAV1(1)              <-------GAMYB   -------->HAHB4    ------>MYB83              --------->ICU4                     --------->ALFIN1<---------ATHB51   ------>MYB46(1)            <---------ICU4                       <-----------RAV1(1)       ---------->DOF2  --------- ---------YAB1<---------ATHB51    --------->ANAC55(2)<------MYB46(1)<---------YAB1--------->AtMYB61 - xxxxxxxsmallRNA(si3)<---------ANAC58          <---------ANAC46  --------->ICU4   <---------ALFIN1<--   tttttataaactaaaaattatgggggtgtggcacaaacgtgatttggatgtgtgttggtaattgttaattatgaatagaaagcaccatccttgttcattg  10831500                                                                                             <-------TEIL                                                                                            ---------                                                                                    <-------TEIL                                                                                   --------->CCA1(2)                                                                                   --------->ARR14(1)                                                                                  <---------ARR14(2)                                                                                  --------->ARR11(1)                                                                                  --------->ARR14(2)                                                --------->AHL20(1)                <---------GLK1(2)                                                <---------AHL20(1)               <----------TaMYB80                       <-----------GT1         <---------AHL20(2)                <---------HSFB2a(1)                 <------MYB46(1)           ----------->TBP                       <---------HSFC1(2)                 <------MYB83              <---------YAB1 <---------ANAC58       --------->HSFB2a(1) >ATHB12  <------------CBF           ----------->GT1      <---------ANAC58      ----------->ARR10 -------->YAB1<---------MYB52(1)   <------------CBF <---------YAB1       <---------YAB1    <---------ARR14(2) -------WOX13(1)--------->MYB59 <---------ANAC46--------->ARR11(3)     <-----------GT1     --------->ARR14(2)   aatgataatgtagattgttaggttttaactagtgatgtattgtttataaatattttgatggctagtttcgatattacgatgggagattcgctagatacac  10831600                                                                                            <--------                                                                                            <--------                                       --------->TOE1(3)                        --------->WOX13(1)                                      ===============================RAV       --------->AHL20(2)                                  ----------->HVH21               ------>ZmHOX2a(1)         <--------      --------->GLK1(1)         <---------ANAC46  --------->ARR11(3)   ---------->DOF2      <--------  xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----------->RAV1(2)<-----------RAV1(1)   <---------AHL20(2) ----------->GT1       --------->YAB1------->TEIL <---------ARR11(3) <---------YAB1         --------- --------->ALFIN1     --------->AHL20(2)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <-------- >CCA1(2)  ---------->DOF2 <------------CBF  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->YAB1<---   aaggtgtgaaatctaaaggtccaaataaaaattggtgtgaacctgaacacaagatgttaatgtggctccttatgaaagaaattaatcagggtttacgtga  10831700                                                            <---------ZAT2                                                            <---------At4g35610                                                            --------->ZAT2                                                            --------->At4g35610 --------->MYB52(2)       --------->ALFIN1                  <------NtERF2 -ANAC55(2)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -ANAC58              <---------At5g28300               --------->ANAC58 -ANAC55(1)           <---------TOE2(3)                 --------->ANAC46 -ANAC58             <---------DOF5.7(2)           <---------REM1(2)<---------MYB52(2)            === >ANAC55(2)          <-----------GT1          --------->At4g35610   --------->MYB46(3)  ---------->DOF2 -ANAC46             --------->MYB52(1)  <-----------GT1--------->ANAC58        --------->MYB52(1)=== ------YAB1  <-----------GT1 <----------ARF1 --------->ANAC46<---------ANAC46 --------->AtMYB61   <--   tgttagtggcaagtttaacaaattaacggtggagacaagttttttaccagctatacacaggcagcttggaacaaacaaaacctcaccgagtaaaggaata  10831800       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     <---------ARR14(3)     <---------AGP1                                                        --------->REM1(1)     --------->ARR14(3)                                                 --------->TOE1(2)     --------->ARR11(3)                                                ------>ZmHOX2a(2)     <---------ARR14(2)                                               <------ZmHOX2a(2)     <---------ARR11(3)               ------>ZmHOX2a(2)              --------->ARR14(2)     --------->ARR14(2)             --------->ARR11(3)               <---------ARR14(2)  <---------LBD16   ----------->ARR10                <---------ARR11(3)              <---------PCF2       <---------At5g28300 =============HOX2a_HOX2a   <---------ANAC58                     --------->ALFIN1       --------->MYB52(1) ============HOX2a_HOX2a    <---------ANAC58                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----ZmHOX2a(1)         ---------->DOF2                    <<<<<<<<<MYB98------>ZmHOX2a(1)   ggatgaagatcttgaagggtatgtacaaaagcttgtttgatcttcttcgtttcagttttgggttagggtgggatcctacaacgaagaaattcacggctag  10831900                                                                                           <---------GLK1(2)                                                                                      <-----------GT1                                                     --------->YAB1              <---------AHL20(1)                                           --------->ANAC55(2)                   <---------AHL20(2)                                           <---------ANAC55(2)                   --------->AHL20(2)                                    --------->YAB1--------->WOX13(1)            <---------AHL20(2)                                 --------->YAB1  --------->AHL20(2)             --------->AHL20(2)                       <---------TOE1(3)   ----------->GT1                  <---------AHL20(2)                       --------------->AtSPL8    <---------AHL20(2)         --------->AHL20(2)                       <---------------AtSPL8--------->AHL20(2)            --------->AHL20(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  --------->ICU4     --------->ICU4--------->AHL20(1)   agatgatgtatgggatgactatttgaaggtaccaaaaattataacatgtaattaatcaacatagtagtacttatgtataaaattaaatttactgattctt  10832000                                                               --------->YAB1                                               <---------ARR14(3)                                               --------->ARR11(3)                                               <---------GLK1(2)    <---------YAB1                                               --------->ARR14(3)  <---------ARR11(3)                                               <---------ARR11(3)  --------->ARR11(3)              <-                                               <---------ARR14(2) --------->YAB1        --------->At4g35610                                    <-----------HVH21        <---------TOE2(3)          <---------At4g35610                 ---------->DOF2   <---------ANAC58    <------ZmHOX2a(1)                <---------ZAT2         --------->At4g35610       <---------ANAC58  <---------TOE2(3)           <-----------RAV1(1)   tgaacatgctcatctaaacaaaagtcatatgtgtaatgcgtcatttgaagattttgaggatttaagaatgatatttggattgaatgtggcaactggacaa  10832100                                                               --------->O2                                  <---------ANAC58           <---------ALFIN1                                 <---------HSFC1(2)          ----------->RAV1(1)                                 --------->HSFB2a(1)      <---------PCF5                                 --------->HSFC1(2)  --------->ICU4                 --------->GLK1(2)<---------ANAC58   <---------YAB1                               <--    <---------ANAC46        <---------------------WRI1--------->ATHB12                           ----  <---------ANAC46     <-----------RAV1(1)        --------->ICU4  --------->ATHB12             ------ ----------RAV1(1)  <xxxxxxxxxxxxxxxxsmallRNA(s)<---------At4g35610                           -------   aatgttgtgggattaggcgattccattgttgtcgatgcttctcaagttggagatgatgatgggccacatgatttaagtcatgtccaaatattagatgata  10832200          ----------->TGA1<---------YAB1          ----------->HVH21      ------>ZmHOX2a(2)  --------->TOE2(3)     <------ZmHOX2a(2)  <---------ICU4    <---------ARR14(2)  --------->ATHB12    --------->ARR14(2)  <--------HAHB4   <---------GLK1(1)   <---------ATHB12   --------->GLK1(1)   <---------YAB1   --------->ATERF1(1) --------->ICU4                        --------->ANAC58                       < -------LBD16        --------->YAB1                          --------->ANAC58                       < ----->ALFIN1<---------ANAC58                                --------->ANAC46          ----------->GT1 --->CCA1(2) <---------ANAC58                              <-----------RAV1(2)       <-------TEIL  -- -->ARR11(3) <---------ANAC46    ---------->DOF2   --------->AtLEC2              <-------TEIL      --   tggggggatcccatgacgttttctcatcattagagaaaagaagggctgaatcgatgcaagttcaggcaagggaatggatgaaatacatacagtgaaatag  10832300  Previous    Next  AGI:  At5g28820.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27260.1) Range:  from: 10831803    to: 10832536    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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