Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <-------TEIL                           <---------YAB1                         --------->YAB1                        <---------YAB1                                                              -                      --------->YAB1                                                               <x                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                         ---                     --------->ICU4                                                               ---               --------->At4g35610     --------------->AGL15                                      ---         --------->ZAT6 ----------->GT1<---------------AGL15    --------->YAB1                  <----  --------->ATHB12xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------ZAT6                      <------ --YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   ----------->GT1  <---------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   acaatgagtgatcactaagctaaatgatgataaatacatgcctaaaatgagtaaaatacagtgttatcatcaactatagagacaactcgacatgctccac  10778600                     <-------MYC4                     ------->MYC4                     <-------MYC2                     ------->MYC3                     ------->PIF5                     ------->PIF4                     <-------MYC3                     <-------PIF4                     ------->MYC2                     <-------PIF5                    <---------TGA1a                    --------->TGA1a                    <---------ANAC58                    --------->ANAC55(2)            <---------DEAR3(1)           --------->SPL7         ----------->HVH21         <---------SPL7   --------->ANAC58 <---------ANAC55(2)                                                             -   --------->ANAC58 <---------ANAC58                                                                - --------->MYB52(1)------------>OsbHLH66                                                    <-------- -------->ANAC46<-----------------PIF3(1)        --------------->AGL15                    <---------HSFB2a(1) xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)               <---------------AGL15                    --------->HSFC1(2) ------>ANAC58  ==============bZIP_DOF       <---------SPL7                               --------->HSFB2a(1) ------>ANAC58  <----------DOF2            --------------->AtSPL8                         <---------HSFC1(2) ------>ANAC46  <-----------HVH21        --------->ANAC58                    --------->ANAC58      <- -----ALFIN1<---------RAP2.6(2)          --------->ANAC58                    --------->ANAC58    <--- ---ALFIN1 --------->RAP2.6(3)           --------->ANAC46                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   acacaacgcatgggacggcttcacgtgctcaaaatacttcgacacgacgtactcatatgagaagagcaaattttgaggcacgaattgatggaagctttca  10778700         --------->GLK1(2)  --------->ANAC58  --------->ANAC58  --------->ANAC46                                                                    --------->AHL20(2) <-------TEIL                                                              --------->YAB1 --------->SPL1(2)                                                        --------->ICU4 ------->TEIL                                 <------MYB46(1)          --------->ARR14(2) <---------LBD16                      --------->TGA1a                  <---------ARR14(2) --------->SPL7                      <---------TOE1(2)               --------->LBD16  <---------AHL20(2) -------->SPL1(1)                   ------>ZmHOX2a(1) --------->ARR14(2)  ----------->GT1 -------->MYB52(1)     <---------WOX13(1)     <------MYB83          --------->HSFB2a(2)     <-------- --DOF2 <---------GLK1(2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------HSFB2a(2)<---------AHL20(2) --------SPL7         <------------CBF--------->O2 >>>>>>>ZML2     <---------LBD16<---------DAG2 ---- ------------AtSPL3xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------At4g35610     <----------DOF2----   acgtacggaagaatctcgtagtgagattgatgactctcctacgtctgtaggttctagttctgctaatgctccggaaatgataaacttttttaataggcca  10778800                                                                                                 <xxx                                                                                                -----                                                                                                <----                                                 --------->YAB1                                 <----                                            --------->AHL20(2)                                -------                                            <---------AHL20(2)                                <------                        <---------YAB1<---------AHL20(2)                                      <------   ---------->DOF2      --------->ICU4<---------AHL20(1)                                   <---------AHL20(2) --ID1               --------->ICU4   --------->AHL20(2)                                   --------->AHL20(2) ----->O2            <---------ZAT6--------->AHL20(2)                    ------->TEIL <-------TEIL ------->GT1       ----------->GT1 <---------AHL20(2)    <---------TOE2(3)    <---------AHL20(2)-----   agtgaaaaagatgggaagaagtagtgattatttgtattaaaaaattttaaataagaattaagtttttctctcatgtatattttatatgttcattaaaata  10778900   ------------>CBF   <---------YAB1 xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               <----------ID1 ---->ARR11(3)                                                              <---------ICU4 -----ARR11(3)                                                            --------->GLK1(2) -----AHL20(1)                    <---------LBD16         <-------TEIL    <---------ARR14(2) -->AHL20(1)            <---------ANAC58               <---------ANAC58   --------->ARR11(3) ---AHL20(1)            <---------ANAC58               <---------ANAC46   --------->ARR14(2)      <-- ---AHL20(2)          <-----------GT1<------ZmHOX2a(1) <---------ANAC58   <-----------ARR10   <------ ---->AHL20(1)        <---------AHL20(2)   <------------CBF              <---------GLK1(2) <---------   ttttcatcaatgtctaatacaaatttacttgaaatatcaggaacgaattgtcgagttgcgttcatttggaatcgagaatcttgacgacgaagagattgca  10779000                                                                                           <---------TGA2(1)                         --------->GLK1(2)                                                 <---------bZIP60(1)          --------------->AGL15                                                            --------->TGA2(1)          <---------------AGL15                                 --------->ANAC58        ----------->HVH21   <---------TOE1(3)     --------->ARR14(2)                     --------->ANAC58     --------->TOE2(2)   <---------TOE2(3)     <---------ARR14(2)                     --------->ANAC46     --------->TOE1(2) -------ZAT6    >>>>>>>>>TBF1                    <-----------RAV1(1)             --------->MYB46(3) ---ZAT14 <---------HSFB2a(2)                   <---------TOE2(2)              --------->ANAC46    <- ---CBF   --------->HSFB2a(2)                   <---------TOE1(2)          <-----------GT1 --------->bZIP60(1)   gagttaatgttactagaagaagaagcgaatatggaagaatgcatagctcgtatgttgcaatattacacgagatgattttacaaacaacctatgacatcat  10779100                                     --------->ZAT6                                    <---------At5g28300                                   <-----------GT1                        --------->HSFB2a(2)                                                       ---            ----------->GT1 <------ZmHOX2a(2)                                --------->ZAT14      <--         ==========================HOX2a_HOX2a                --------->ANAC55(2)                 <--         <------ZmHOX2a(1) <---------ARR11(3)         <-----------HVH21      <---------ZAT14   <----- --------LBD16          <---------HSFB2a(2)       <-------TEIL<---------ANAC55(2)         --------->ANAC46   atgggggaagaggatggctaattgttcgagatcaaatttacagtaatgaagtttcatgtcagacacttatccgaatgagttcagaggcattcacacagtt  10779200           --------->TOE1(2)                                                  <---------ICU4        -     <---------ICU4                                                           <--------HAHB4      --- -------->GT1                                 --------->ANAC58                --------->ATHB12    --- -------ANAC55(2)                         --------->YAB1                     <---------ATHB12     --- -------ANAC46                           ------->TEIL       --------->ALFIN1 --------->ICU4     ----- ----MYB52(1)                ---------->DOF2  --------->ANAC58      <---------ATHB12         <-------   atgtgaaatattacatgggaagtatggtttacaaagctcgacgaacataagcctcgacgagagtgttgcaatctttctaatcatttgtgcctcaaatgat  10779300                                                                                                   <-                                                                                                   --                                                                                                 ----       <---------ARR11(3)                                                                        <---       --------->ARR11(3)                                                                        <--- -------->ANAC46                                                                                 ---- ------>ANAC46                                                                                   ---- ------>ANAC58                                                                    --------->ATHB12<-- ------>ANAC58    <---------TOE1(3)                                    --------->ANAC58       ------- ---->CCA1(2)     <---------TOE2(3)                      --------->YAB1--------->ANAC58       <------ --ATHB12     <----------DOF2                           <-------TEIL ---------->DOF2      <---------ZAT14   acacaacgtgatattgcattaaggtttggacatgcccaagagacaatttggcgaaagtttcatgatgtgcttaaagcaatggaacgattggctgtagagt  10779400        --------->ANAC58        --------->ANAC58    --------->ANAC46  --------->ANAC58                                            --------->CCA1(2)  --------->ANAC58                                           --------->ARR11(3)  --------->ANAC46                                           <---------ARR14(3) --------ARR14(2)                                            <---------ARR14(2) ------->ARR14(2)                                            --------->ARR14(2) ------>TaMYB80                                              <---------AHL20(1)            <---------ZAT14 --------ARR10                                               --------->AHL20(1)            --------->ZAT14 ------ARR14(2)                                              --------->ARR14(3)     <---------AHL20(2) ----->ARR14(2)                                        --------->CCA1(2)   <---------AHL20(2) ------->ARR10       --------->ARR11(3)              xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------ZAT18 --------TaMYB80     <---------ARR11(3)        <---------AtLEC2           <---------YAB1   --------->ZAT18 ---->GT1   --------->DAG2              <---------ATHB12     <---------ARR11(3)     --------->ATHB12 ---ANAC46 ---------->DOF2        --------->ZAT6    <---------YAB1     --------->ICU4  <-----------RAV1(1)   atatacgcccaagaaaagtcgaagaacttagagctatctctaatcgtttgcaagatgatacaagatattggccatttttaatggatttattggtgcactt  10779500  Previous    Next  AGI:  At5g28730.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G43722.1); similar to hypothetical protein [Sorghum bicolor] (GB:AAD27562.1) Range:  from: 10779007    to: 10780222    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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